Tachysurus vachellii: 132843323
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Entry
132843323 CDS
T09596
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tvc
Tachysurus vachellii
Pathway
tvc04137
Mitophagy - animal
tvc04140
Autophagy - animal
tvc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132843323 (hif1ab)
04137 Mitophagy - animal
132843323 (hif1ab)
04148 Efferocytosis
132843323 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132843323 (hif1ab)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132843323 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
132843323
NCBI-ProteinID:
XP_060722547
LinkDB
All DBs
Position
3:27636886..27649123
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AA seq
795 aa
AA seq
DB search
MNVNDFRPRWRPSFSVVFTRVSSERRKEKSRDAARCRRGKESEVFYELANQLPLPHNVTS
HLDKASIMRLTISYLRMRKLLNSCQTKDETVEESELESQLNSFYLKALEGFLMVLSEDGD
MVYLSENVCKCMGLTQFDLTGHSIFDFAHPCDQEEVREMLVHRTGSKKTKELNTERSFFL
RMKCTLTSRGRTVNIKSSTWKVLHCTGHVRVQEHSDGSGDGGFKEPSITYLVLICEPIPH
PSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGHEPDDLLNRSVYEYYHALDSDHLNK
THHNLFAKGQATTGQYRMLAKKAGFVWVETQATVIYNPKNSQPQCVVCVNYVLSGIVEED
MVLSLQQTMPEKTVEKEKEKEEEEEVQVEKEDNSIMDMMKLFKKDLLACLDSPNNLYEKL
KDEPEALTVLAPAAGDTIISLDFNSSDSEIQLLKEVPLYNDVMLPSTNEKTALPLSPLTP
SNSSPDLDKMEPGTEDFSFTSTAHRTKDTANTPSSSTSSSEPSSPADYFHVDSDIGSEFK
LDLVEKMFATDTEANTDFNTQEMGDLDLEMLAPYIPMDDDFQLHIPSPLDPLPSSPQTGS
DINSLFQQSPPRQPSATSTNISLKPEPSPRIPSPLHLLQEVSSIFVTPFNEVSQALDNSP
PMGTPLAKRIQMEDQGVQLSTKVLSVQNAQRKRKLEITSLSQAVGLDALLQSVDEAVEPG
KRAKVLEVKGSSLLGGNKTILILPSDVASRLLSSSFETRGLPQLTRYDCEVNAPIQDRHS
LLQGEELLRALDQVN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttaatgactttagaccaagatggagaccaagtttctctgttgtcttcacaagg
gtgagctcggagcgcaggaaggagaagtcaagggatgcggcccgatgtcgcagaggcaag
gagtctgaggtattttacgagcttgcaaaccagctgcccctgccccacaatgttacctct
cacctggacaaagcctccatcatgagactcaccatcagttacctgcgcatgagaaaactg
ctgaactcttgtcagactaaagatgaaacagtggaggagtctgaactggagagccagctt
aacagcttctatctgaaggccctggaggggttcctaatggttctatctgaggatggagac
atggtctatctctctgaaaatgtctgcaaatgcatgggcctcacacagttcgatttgacc
ggccacagcatttttgactttgcacatccttgtgatcaagaggaagtaagggagatgctg
gtgcacagaactgggtccaagaaaaccaaggagctaaacacagaacgaagctttttcctg
cgcatgaagtgcacactcactagtagaggtcgcaccgtcaacatcaagtcttccacttgg
aaagttcttcactgcacaggacacgtgcgtgttcaggagcacagtgatggttctggggat
gggggttttaaagagccttccattacctatctggtcttgatctgtgagcccatacctcac
ccctccaacatcgaggtgcctctggatagcaaaactttcctaagccgccatactctggat
atgaagttctcatactgtgatgaaagaatcacagagctgatgggacatgagccagatgac
ctgctaaataggtctgtgtacgaatactaccatgccctggactctgaccacctcaacaag
acacatcataatttgtttgcaaagggtcaggctaccacaggtcaatatcgcatgctagcc
aagaaagcaggctttgtatgggttgaaactcaagccaccgtcatttacaaccccaagaac
tcccagcctcagtgtgttgtgtgtgtcaactatgttctcagtggtattgtggaggaggac
atggttctttctctgcagcagaccatgcctgagaagactgtggagaaggagaaggagaag
gaggaggaggaggaggtgcaagtagagaaggaggacaattcaattatggatatgatgaag
ctcttcaagaaagacctgttggcctgcttggacagtcccaacaacctgtacgagaagctc
aaggatgaaccagaagccctcaccgttctggctccagctgccggggacaccattatttca
cttgatttcaacagctcagactctgaaatacagctgttgaaggaggtacccctttacaat
gacgtcatgctgccctccaccaatgagaaaactgctttgccgctgtcaccactgacaccc
agcaattcctctccagatttggataaaatggagcctggaacagaggacttttcattcacg
tccacagcccaccgcaccaaggacactgccaatactccatctagctccaccagttcctca
gagcccagtagtcctgcagattacttccatgttgattcagatattggttctgaatttaaa
ctggatttggttgagaaaatgtttgctactgacacagaagccaacacagattttaacaca
caggaaatgggagatcttgaccttgagatgctcgccccatatattccgatggatgatgac
ttccagctgcatatcccctcccctctggacccactcccttctagtcctcagactggttct
gatattaactctcttttccagcagtcaccccctcgccaaccttcagcaaccagtaccaat
atttctttaaaaccagagccatcaccccgcatcccctctcccctccacctgctgcaggaa
gtgagcagcatctttgtcacacccttcaatgaggtctcacaagcccttgacaacagccca
ccgatgggcaccccattggccaaaagaatacaaatggaagaccagggagttcagctttct
acaaaggttctttctgtccaaaatgcccagcggaagaggaaactggagattacatcactc
tctcaagcggttggactggatgctttgctccagtctgtggatgaagctgttgagcctgga
aagagggccaaggtgctggaggttaaaggttcaagcttacttggtgggaacaaaaccatt
ctgatactgccatctgatgtggccagtcgtttgctgagcagctcatttgagaccagaggg
ttgccacaactgacacgctacgactgtgaggtcaatgcccctattcaggaccgtcactcc
ttgctacagggcgaggagctgctgcgtgctctggaccaagttaactga
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