Tachysurus vachellii: 132843449
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Entry
132843449 CDS
T09596
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
tvc
Tachysurus vachellii
Pathway
tvc04510
Focal adhesion
tvc04517
IgSF CAM signaling
tvc04518
Integrin signaling
tvc04519
Cadherin signaling
tvc04520
Adherens junction
tvc04530
Tight junction
tvc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132843449
04518 Integrin signaling
132843449
04519 Cadherin signaling
132843449
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132843449
04520 Adherens junction
132843449
04530 Tight junction
132843449
09142 Cell motility
04810 Regulation of actin cytoskeleton
132843449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132843449
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tvc04812
]
132843449
04147 Exosome [BR:
tvc04147
]
132843449
Membrane trafficking [BR:
tvc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132843449
Cytoskeleton proteins [BR:
tvc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
132843449
Exosome [BR:
tvc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132843449
Exosomal proteins of colorectal cancer cells
132843449
Exosomal proteins of bladder cancer cells
132843449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
132843449
NCBI-ProteinID:
XP_060722750
LinkDB
All DBs
Position
1:104901..131170
Genome browser
AA seq
899 aa
AA seq
DB search
MVDYHAANNPAQYSAQQSYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIE
NIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAE
EIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISW
KDGLAFNALIHRHRPELINYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARP
DEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRT
IPWLENRAPEKTMVEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAF
MPSEGKMVSDINGAWHNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHESWTDGK
ENMLNQKDYERASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVN
ARCQKICEQWDVLGALTQNRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMEDLQ
DMFIVHNIEEIQGLITAHEQFKATLPEANKEREAIQAIQAEVQKIAQYNGIKLSGTNPYT
TITPSSIDSKWDKVQQLVPQRDGALQEELSRQKSNDHLRRQFANQANMVGPWIQNKMEEI
GRISIEMNGTLEDQLTHLRQYEQSIIEYKPNIEQLEGNHQLIQEALIFDNKYTAYTMEHL
RVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRASFNHFDKDHSGTLIAEEFKA
CLISLGYDVENNKQGDAEFARIMAIVDPNNTGAVTFQAFIDFMSRETTDTDTADQVIASF
KILAGDKNYITAEELRRELPPDQAEYCISRMAPYRGSDAVPGALDYMSFSTALYGESDL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggtagattaccacgctgccaataatccagctcaatattccgcacagcaaagctacatg
gagcaagaaaacgactgggaccgcgacttgctgctcgacccggcctgggaaaagcagcag
aggaagacattcacggcatggtgtaactctcacctgcgtaaagctggaactcagattgag
aacattgaggaggacttcagagatggcctgaagctcatgctgctgcttgaggtcatctca
ggagagcgattacccaaacctgagcgagggaagatgagagtgcacaagatcaacaacgtc
aacaaagcacttgacttcattgccagcaaaggagtcaaactagtatctattggagctgag
gaaattgttgatggtaatgtgaagatgaccctcggtatgatctggaccatcatcctccgc
tttgccattcaggatatctcagtggaggagacctcagctaaagaggggttgttgttgtgg
tgtcagaggaaaacggctccgtacaaaaacgtcaatgtacagaacttccacatcagctgg
aaggatggtttggcctttaatgctctgattcacagacacagacctgagcttatcaactac
gacaaactccgcaaggatgatcctgttaccaatctgaacaatgcctttgaagtggctgag
aaatacctggacattcccaagatgctggatgcagaggacatagtgaacacagctcgtcct
gatgagaaagctataatgacttatgtgtccagtttctaccatgcattttctggagcacag
aaggccgagacagcagctaatcgcatctgtaaggttctcgcggtcaatcaggagaacgaa
caactgatggaggactacgagaaactcgccagtgatttgttggagtggatcaggagaaca
atcccatggctggagaacagagctccagaaaagacaatggttgagatgcagcagaagctg
gaggacttcagagattatcgtagagttcataaacctcctaaagtccaggagaaatgtcag
ctagagatcaactttaacacgctgcagaccaaactgcggctcagtaaccggccggcgttc
atgccctctgaggggaagatggtgtctgacattaatggggcgtggcataatctggagggg
gcggagaaaggctatgaggaatggctactgaatgaaattcgccgactggagagactcgat
caccttgctgagaaattccgccagaaagcagctatacatgagagctggactgatgggaag
gagaacatgttgaatcagaaggactatgagagagcatctctgtctgagattaaagctctg
ctgaagaaacatgaggcatttgagagtgacctcgctgctcaccaggaccgtgtggagcag
atcgctgccatcgcacaggaactcaatgagctggactactacgactctccaagtgtaaat
gctcgatgtcagaagatctgtgagcagtgggacgtgctgggagctctgacccagaaccgc
agagagtcactcgagaggacagagaaacagctggagtccattgatgagctttatctggag
tacgcaaagcgagcagctccatttaataactggatggagggagcgatggaggacctgcag
gacatgttcatagtgcacaacattgaggagatacagggtttgatcacagcccatgagcaa
tttaaggcgactctcccggaggccaataaggagcgggaggcgattcaggctattcaggct
gaggtgcagaagattgcacagtataacggcatcaagctcagcggcaccaacccctatacc
actatcacacccagcagcatcgacagcaagtgggacaaggtgcagcagttggtccctcag
cgtgatggagctctgcaggaggagctcagccgtcaaaagtctaacgatcatctgagacgc
cagtttgccaaccaggctaacatggtgggaccctggatccagaacaagatggaggagatt
ggacggatatcgattgagatgaacggcactctggaggatcagctaactcatctgcgtcag
tatgaacagagcatcatcgagtacaagcccaacatcgagcagttggagggaaatcatcag
ctcatccaggaggcgctcatctttgacaacaaatacactgcttacaccatggagcaccta
cgtgtaggatgggagcagctcctcaccacaatcgctcgcaccattaatgaaattgagaac
cagattctgacccgtgacgctaaaggcatcagtcaggagcagctccatgagtacagagcc
tccttcaaccactttgacaaggaccacagcggcacattgatagccgaggagttcaaggca
tgtttgatcagtctcggttacgacgtggagaacaacaaacagggcgatgctgagtttgcc
cgcattatggccattgtggaccccaacaacactggggctgtgaccttccaggccttcatc
gacttcatgtccagggaaacgacagacacggacacagcagaccaggtcattgcctccttc
aagatcctcgctggagacaagaattacatcactgcagaggagttgaggcgtgagctgccc
ccagatcaggctgaatactgtatctcccgcatggcgccctacagagggagtgacgctgtg
cccggtgccctcgactacatgtctttctccaccgctctgtatggagagagcgacctctaa
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