Tachysurus vachellii: 132843530
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Entry
132843530 CDS
T09596
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
tvc
Tachysurus vachellii
Pathway
tvc03320
PPAR signaling pathway
tvc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
132843530 (rxrgb)
03320 PPAR signaling pathway
132843530 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132843530 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tvc03310
]
132843530 (rxrgb)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
132843530 (rxrgb)
Nuclear receptors [BR:
tvc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
132843530 (rxrgb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
132843530
NCBI-ProteinID:
XP_060722906
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All DBs
Position
3:complement(34225869..34253587)
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AA seq
446 aa
AA seq
DB search
MDNSDAYLHLDSPGALNSSLSQPPTVGSMMGHSSVISTSRQLHSAMGYSVITSPLNSPSV
SLPSTPAMGFGALNSPQMNSLNNVSSSEDVKPPPGLLPLANISSYQCTSPGSMSKHICAI
CGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRENKECLIDKRQRNRCQYCRYQKCLA
MGMKREGVCVSVQEERQRGKEKSDNEVELTSSYNEDMPVEKILDAELAVEPKTETHTDDS
QGNSTNDPVTNICQAADKQLFMLVEWAKRIPHFSDLPLDNQVILLRAGWNELLIASFSHR
SVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLF
NPDAKGLSNPAEVEVLREKVYASLESYTKHKYPNQPGRFAKLLLRLPALRSIGLKCLEHL
FFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagtgacgcgtatttacatctcgattcacctggggcacttaactcctcactc
tcacagcctccaacagtgggctccatgatgggtcactcgtccgtcatcagcacctcacgt
caacttcattcggctatgggctactcggtcatcacttcccctttgaactcgccttctgtc
tcactaccctccacacctgccatgggctttggcgccctcaacagcccacagatgaactct
ctgaacaatgtgagcagctcagaagatgtgaagcctcctcctggtctcttgcctctggcc
aacatcagtagctaccagtgcaccagtcctggctctatgtccaagcacatatgtgccatc
tgtggtgatcgctcctcaggaaaacactacggtgtgtacagctgtgaggggtgtaaaggt
ttcttcaagagaaccatccggaaagacctgacctacacgtgtcgagaaaataaggagtgt
ctgatcgataaacgtcagcgcaatcgctgccagtactgtcgctaccagaagtgtctcgcc
atgggcatgaagcgggaaggtgtgtgtgtgtcggttcaggaagagaggcagcgtgggaag
gagaagagcgataatgaggtggagttgaccagcagttataatgaagacatgcctgtggag
aaaatcctggatgctgagcttgcagtggaacccaagactgaaacacacacagatgacagt
cagggaaactctacaaatgacccagtcactaacatctgccaggccgcagacaagcagctc
ttcatgctggttgaatgggctaaaaggataccgcacttctcagaccttcccctggataat
caggtcattctacttcgagcaggctggaacgagttgctcatcgcctccttctcacatcgc
tcggtcacagtaaaagatggtatcctgctggccacaggtctccacgtgcacagaagcagc
gcacacagtgcaggagtcggctccattttcgacagagtgttgactgagctagtgtctaag
atgaaggacatgcagatggataagacggagctaggctgcctcagagccatcgttctcttt
aaccctgatgctaaaggcctgtcgaacccagctgaggtggaggtacttagagaaaaagta
tatgcctcgttggagtcctacaccaagcacaaatatcccaaccagccgggcaggtttgct
aagctgttactgcgtctccctgctctgcggtccattggactgaagtgtctagagcatctc
ttcttcttcaagctgattggagacactcccatagacaccttcctcatggagatgcttgaa
gcaccccatcagataacatga
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