Tachysurus vachellii: 132844120
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Entry
132844120 CDS
T09596
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132844120 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132844120 (smarcc2)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132844120 (smarcc2)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132844120 (smarcc2)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132844120 (smarcc2)
PBAF complex
132844120 (smarcc2)
GBAF(ncBAF) complex
132844120 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
132844120
NCBI-ProteinID:
XP_060723275
LinkDB
All DBs
Position
4:complement(258109..282790)
Genome browser
AA seq
1032 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKSFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFLTIEKSLVQNNCLTRPVIYLSSEIEPKLLGKMKDIIKRHQGSVTDDKQASSHLVVP
IPASLEEEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAVVEDPPSAEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGGTRRKRISAKTLTDEVSAPDERRDKKPANAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYNKSKRGQREEEQEDLNKDLDEPSPVPASEETLNKTVT
KKDSDSTPVKGGTDGDEQEDEAMETVGKEEDEGSASVKGEPVKGSDLHEDNVTEQTHHII
IPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA
CRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVPLQ
PKSSQTPSSQPMMSFPDKVKDKPTDLQNFGLRTDMYSKKSGPSKSKNAASATREWTEQET
LLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEEGPTSLGPLAYQPVPF
SQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARVS
GRPDPLYGLEGSGIAGTSLEDADKPAEESNDESKSSDAQNTEDKRDNKDGKDGANEEEEK
QGENGKKEEEGSKEVETEREAEKTDSDTGDVEKEKEGKEGSEDGQREGESDVERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQIQHQHHSNQPGNQPGNAP
PIPHQTAPNANAPPPAPSLAPAVSASNPSEAPPTSASHGSSPNNTQPGAVHDSSTALTGD
SLHPSGPVTPAQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcgggccgaatgtgaaatatttcgaagcctctgatacc
gtgtctcagttcgacaatgtccgcgtgtggctggggaagaattataaaaagtatatccag
gcagagcctcccactaataaatctctgtccagtttggtggttcaactgctgcagtttcag
gaggaggtttttggtcgacatgtcagcaaccctcctctcaccaaactaccgatgaagagt
tttttggactttaaggcaggaggagcgctgtgtcacatacttgctgctgcttacaagttc
aagagtgaccaaggatggaggaggtttgatttccagaatccttctagaatggaccggaat
gttgagatgtttttgaccatagagaagtctctggtacagaataactgtctgactcggcct
gtgatctacctgagctcagagatcgaacccaaacttctgggaaaaatgaaggatattatt
aaacgacatcagggctcagtaactgatgataaacaggctagttctcatctggtggttccg
atccctgccagtctggaagaggaggagtgggtccgtcctgtaatgaagagagataaacag
atgctgctgcactggggttattggcccgacagttatgatacatggatctcagctagtgaa
gtggaggctgtagtggaggatccacccagtgcagagaaacccaggaaggttcatgctaag
tggattttggatctggatcagtataatgagtggatgaatgaggaagactatgaggtgggt
gaaggaggcacaaggaggaagaggatctcagctaagactctcacagatgaagtgagtgct
cctgatgagaggagagataaaaagccggccaacgccaagaaacgcaaacgctctccttcg
ccatccccaactccgccccctcaggagagcaagaagaagaacacaaagaaagggcccact
accccctacaataagtccaagcgaggtcagagggaggaggagcaggaggatttgaataaa
gacctggacgagccgtcacctgtacctgcatcagaggaaacactcaataaaacagtgact
aaaaaggactcggactcaactccagttaagggagggactgatggagatgaacaggaggat
gaggcaatggagacggtgggaaaggaggaggatgaaggttctgccagtgtgaagggagaa
ccagtgaaaggttctgatctacatgaggataacgtaacagaacaaacacaccacattatc
attcccagctacgctgcctggttcgactacaacagtgttcacgctatcgagcgcagagct
ctgcctgagtttttcaatggaaagaacaaatctaagacccctgagatttatctggcatac
aggaactttatgatagatacatatcggctgaacccacaggagtatttgacgtctactgct
tgccgtagaaacctggcaggagatgtttgtgccatcatgagggtccatgcatttctggaa
cagtggggtttgattaattatcaggtggattctgagagccgtcccacccccatggggccg
ccgcctacatcccactttcacgtcctggcagatacgccgtccagtctcgtacccctgcag
ccgaaatcctctcagactccgtcctcacagcccatgatgtcattcccagacaaagtgaag
gacaaaccgacagatctgcagaactttgggctgaggaccgacatgtacagtaagaagagc
ggcccttctaagagtaaaaacgctgcaagtgccacacgagagtggactgaacaggaaact
ctgctgctgcttgagggtctggagatgtacaaggacgactggaacaaggtgtcagagcac
gtgggaagccgcacacaggacgagtgtatcctgcacttcctgcgcttgccaatcgaggac
ccttacctggaggaaggacccacgtctctggggccgctggcgtatcagccggttccgttc
agtcaggcggggaacccggtgatgagcaccgtggctttcctggcttcagtggtcgaccca
cgagtggcctcagctgcagccaagtctgccctggaggagttttcccggatgaaggaggag
gttccagcagctctggtggaggctcatgtacggcgtgtggaagaagcagccagagtaagt
ggcagaccagatccactgtacggcctggaggggagtggcatcgccgggacgagtctggaa
gatgcagataagcctgcagaggaaagtaatgacgagagcaaaagcagtgatgctcaaaac
acagaggacaaaagagacaacaaggacggtaaagatggagcgaatgaagaagaggagaaa
cagggtgagaacgggaagaaagaagaagaaggcagtaaagaggtagaaacagaacgggag
gcagagaagacagactcagacacaggtgatgtagagaaggagaaagaaggaaaagaagga
tcagaggatggacagagggaaggagagagtgatgtagagaggaaagcaaaggtggagaga
gatgttggtgaggggaatctggccacagctgctgcctctgcactcgctgctgctgcagtt
aaagccaagcacctggcagcagtagaggaaaggaagatcaagtctctagtggctctactg
gtggagactcagatgaagaagctggagatcaaactgaggcactttgaggagctggagacc
atcatggatcgggagagagaggcgttggagtatcagaggcagcagctcctggctgatcgt
caggcgttccacatggagcagttgaagtatgcagagatgagagcacgccagcagcacttc
cagcagatacaacaccagcaccatagcaaccaacccggcaaccagcctggcaatgcaccg
cccatcccccaccaaacggcacctaacgctaacgccccgcctcctgcacccagccttgcc
ccagctgtctcagccagcaaccccagtgaagccccacccacctctgcctctcatggctcc
tcccccaataacacacagcctggagcagtgcacgactccagcactgcactaacaggagac
tccctccatccctccggcccagtgacccctgcacagtga
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integrated database retrieval system
