Tachysurus vachellii: 132844210
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Entry
132844210 CDS
T09596
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132844210 (ccdc174)
03041 Spliceosome [BR:
tvc03041
]
132844210 (ccdc174)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132844210 (ccdc174)
Spliceosome [BR:
tvc03041
]
Complex C
Other components
EJC/TREX
132844210 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
132844210
NCBI-ProteinID:
XP_060723408
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All DBs
Position
4:3495700..3501147
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AA seq
477 aa
AA seq
DB search
MDKKKKQYNVTASSLVDLKAELYRKQESFKQEKLAQDAGTTSKSHNHTKKPSVWTKQNQG
VSARAQKDVEKTAEEEQNLDKSRQKLEEKARLYEQMTKGDFPDEETESLYLVDFTQKIIE
QKKVAQSREAESGDRDGEGTDLHVPIPPPQSTDEEWVDYVDALGRSRKCLRKDLPQFQKM
DQDLQGKRVVGVDRTLLSEDMRREMQREQWEREEEEQMKRPVGPVHYENIRDQEARDLGV
GYFAFSQDEEQRKKQQETLDMLRAQTADQRTKRENLKEKRKALLEARLAKVKMRKMKKSK
MEPGAKEEEAPAPDGAVKEEEDKPELVIGPPAPPEAVSKKVEVEIQERKDSRPGVPHVRE
WDRGKEFTWGQWTTQRREERDSEFAPPSLYFGDERRAGHGRLTQEVRRGKGKPAFKWSEE
QKGSDQDGTQRQTQNTHSSFTPFPNQASFSQPQQTTQAPSAQTSDLDALLSFYKNSV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaaaaaacaatataatgtcacagcatcgtcgctggttgatttgaaagca
gagctttacaggaaacaggagtcgttcaagcaggagaaacttgctcaggatgcaggaact
acatccaaatcacacaaccacacaaagaaacccagtgtatggactaaacagaaccaaggc
gtgtctgcacgggctcagaaggatgtcgagaaaacggcagaagaggaacaaaacttagat
aaatcaaggcagaagctggaggagaaagcacgcctctatgaacagatgactaaaggagat
tttccagacgaggagacagaaagtttgtacctggtggattttacgcagaagataatcgag
cagaagaaagtggcacagagcagagaggctgaaagtggagacagagatggggaaggaaca
gacctgcacgtccccatcccacccccacagagcactgacgaggaatgggtggactatgtt
gatgcgctgggaagatcaaggaagtgtttaagaaaggatttaccccagtttcagaaaatg
gaccaagatttacagggcaagagagtggtcggagttgacaggacattgttgtctgaagac
atgaggcgagagatgcagagagagcagtgggagcgggaggaagaggagcagatgaagagg
cccgtagggcccgttcactacgagaacatccgagatcaagaggccagagatctgggtgtt
ggctatttcgctttttctcaggatgaagagcagcgcaaaaagcaacaggaaactctggat
atgctgagagcccagaccgcagatcagcgcacaaagcgtgagaacctgaaggagaagcgg
aaggctctgctcgaggctcgactggctaaagtgaaaatgaggaagatgaagaaaagcaag
atggagcccggagcgaaggaggaagaagctcctgcgcccgacggagcggttaaagaggaa
gaggacaaacccgagcttgtgatcggacctccagctcctcctgaagccgtaagcaaaaag
gtggaggttgaaattcaggagagaaaagactcgaggccgggagtgccacatgtcagagag
tgggacagaggaaaagagttcacgtggggtcagtggacgactcagcgacgggaggagagg
gattcggagtttgcgccgccctctttatacttcggggatgagagacgagccggtcacggc
aggttaactcaggaagtacgaaggggcaaagggaaacctgccttcaaatggtctgaggag
cagaagggatcagatcaggacggcacacaaagacaaactcaaaacacacactcatctttt
acaccgttcccaaaccaggcctcgttctcacagcctcagcaaacgacacaagcaccatct
gcacagaccagcgatctggatgctcttttatccttttacaaaaactctgtttaa
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