Tachysurus vachellii: 132844228
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Entry
132844228 CDS
T09596
Symbol
dync1i2b
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tvc
Tachysurus vachellii
Pathway
tvc04145
Phagosome
tvc04814
Motor proteins
tvc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132844228 (dync1i2b)
09142 Cell motility
04814 Motor proteins
132844228 (dync1i2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132844228 (dync1i2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132844228 (dync1i2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tvc04812
]
132844228 (dync1i2b)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
132844228 (dync1i2b)
Cytoskeleton proteins [BR:
tvc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
132844228 (dync1i2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
132844228
NCBI-ProteinID:
XP_060723432
LinkDB
All DBs
Position
4:4207866..4219026
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AA seq
630 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETEGRGEGASPPNDDSDLERKRRET
EALLQSMGITDPAMVPPPMSPSAKSVGTPSETGSQDSVDGAAGTRTLHWDSDPSTLLLHS
DSQHGRGPLRLGMAKLTQVDFPPRELVSYSKETQTPVTAQPKDAEEENEEEDLAAAPAAL
ETPQENEPHNEEEEAPPHELTEEEKQEILHSNDFLMFFDQSSRIVERALSEQVDVCFDYS
GRDLQDKEGETQAGTKLSLNRQFTDERWSKHRVVTCLDWSPQYPELLMASYSSNEEAPHE
PDGVVLVWNMKYKKTTAEYVFHCQSAVMSAAFAQFHPNLVVGGTYSGQIVLWDNRSNKRT
PVQRTPLSASAHTHPVYCVNVIGTQNAHNLISISTDGKMCSWSLDMLSTPQDSLELVFKQ
SRPVAVTSMAFPLGDVNNFVVGSEDGTVYTACRHGSKAGISEMFEGHHGPVTGLDCHTAT
GPVDFSHLFVTSSFDWTVKLWSTRNTKPLYSFEDNSDYVYDVMWSPAHPALFACVDGVGH
LDLWNLNNETEVPSASVTVEGNPALNRVRWANSGREVAVGDSEGRVHIYDVGEQIAVPRQ
DEWTSFLKTLSELGENQEEEEDLATQRLAA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgagctaaaggcagagctggaaaggaagaaacagcgtcttgctcag
atcagagaggagaagaagagaaaagaggaagagcgcaagaaaaaagaaactgaaggacgc
ggcgaaggcgcctctccgcccaatgatgactctgatctggagaggaagaggagggagacc
gaggctctgttgcagagcatgggcatcacagatcctgccatggtcccccctcccatgtct
ccctctgccaaatcagtgggcactccgagtgaaaccggcagccaggactcggtggacggc
gccgctggaaccaggactctgcactgggattctgacccctctacccttctgctgcattca
gactctcagcatggacgaggtcccctcaggctcggcatggctaaattgactcaggtggat
tttcctcctcgtgagctcgtgtcgtactctaaagagactcagactcccgtcaccgctcag
cctaaagatgcggaagaggaaaacgaagaggaggatctggcagcggcgccggctgctctc
gagactccgcaggaaaacgagcctcacaatgaggaagaggaggcgccacctcatgagctg
acggaggaggagaagcaggagatcctacactcaaatgacttcctgatgtttttcgatcag
agctctcgcatcgtggaacgcgctctttctgagcaggtggacgtctgcttcgactacagt
ggacgagaccttcaggacaaagagggagagactcaggctggcaccaagctgtcgctgaac
agacagtttacagatgagcgctggtccaaacacagagtggtcacctgtctggactggtca
cctcagtacccagagttgttgatggcttcctacagcagtaatgaagaagctcctcatgag
ccagatggtgtggtgttggtgtggaacatgaagtacaagaaaacaacagcggagtatgtc
ttccactgtcagtcggcggtgatgtccgcagcttttgcgcagtttcatccgaacctggtt
gtgggagggacgtactctggacagatcgtcctgtgggacaatcgcagtaacaagcggacc
ccagtacagaggacacctctctctgcctctgcacacacgcacccggtgtactgtgtgaat
gtcattgggactcagaatgctcacaacctcatcagcatctctactgatggcaaaatgtgc
tcctggagcctagacatgctttccacgcctcaggacagtctggagctggtgtttaagcag
tctagacctgtggcggtgacatctatggcatttcctctgggtgatgttaataactttgtg
gtgggcagtgaggacggaacggtctatactgcctgcagacacggcagtaaagcagggata
agcgagatgttcgagggtcatcatggcccagttacagggcttgactgccatacagccacc
ggacctgttgatttctctcacctgtttgtgacttcttctttcgactggaccgtcaagctg
tggagcaccaggaacactaagcctctgtactcattcgaggacaactctgactacgtgtat
gacgtcatgtggtctcctgctcaccctgcactctttgcctgcgtcgacggagtcggacac
cttgacttgtggaacctcaacaacgagactgaggttccctcagcttcagtgacagtagag
gggaaccctgcgctaaaccgcgtgcgctgggccaattctggcagagaggttgccgtcggt
gattctgagggtcgtgtacacatctacgacgtaggagagcaaatcgccgtgccgcggcag
gacgaatggaccagcttccttaaaacactcagcgaactcggagagaaccaggaggaggag
gaggatctggcaacccagcgccttgctgcctga
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