Tachysurus vachellii: 132844254
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Entry
132844254 CDS
T09596
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132844254
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132844254
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132844254
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132844254
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132844254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
DUF6377
MAP17
Motif
Other DBs
NCBI-GeneID:
132844254
NCBI-ProteinID:
XP_060723477
LinkDB
All DBs
Position
4:5390593..5629800
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AA seq
1214 aa
AA seq
DB search
MDLKDFYLLATFVACLWLDPAIAQELIYSIREELQENVLIGNIPKDLNISHMNAASNNLV
YRLVSKAGDNPLLRVISNTGEIFTTSNRIDREKLCPGPSFEDTECSFEIEVVILPNDYFR
LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELVNG
QSTFGLDIVETQEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGNPQKSSTAILQVTVTD
VNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGSNAEIKYMFGTQVSPSTRRLFA
LNATTGLITVQRPLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNAPNIDLRYII
SPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLLETS
ALLDYEGTKEYIFKIVASDSGKPSLNQTALVKVKLEDENDNPPIFSQPVIELSVMENNQR
DLFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTA
RDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGEN
AEVSLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAVDGGRPPCSSVAKVTIN
VIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIISGNGRG
LFRIDPVTGNITLEEKPMIADIGLHRLVVNISDLGYPKSLHTLVLVFLYINDTVGNSSFI
YDLIRRTMETPLDRNIGESSETYQNVDNLKTIIAIVTGAMVVIVVIFITVLVRCRHVSQF
KAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVSIEENKPDDPAHEPINGTI
SIPAELEEPGIGRFDWNTTPTTTFKPNSPDLARHYKSASPQSAFHVKADTPVSVKKHHVV
QELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGGTLHNRQGTLTRTRTELN
PDYLDLRSRTDLNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGEPESVGGGALLSKP
LPLAQEEFYEQDKRTEADGNSDPNSDGLLGPRGLMEATEMCTQECLVLGHSDNCWMPPKS
PAQSYGGSQSEWTKDKLLNGHTLNRGWKSSHEHFGDRKSFAVGGVSSHMTDIPLASLKSY
QASSGSENPKEQQL
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaggatttttacttattggcaacctttgttgcttgcctgtggctggatcca
gccatcgcccaagagctaatttactcaatccgtgaggagctgcaagagaacgtacttatt
ggaaatataccaaaggatttgaacatctcccatatgaacgctgccagcaacaatctggtt
taccgtctggtctcgaaagccggggacaacccattactgagagtaataagcaacacagga
gagatttttaccacttcgaaccgtattgaccgcgaaaaactctgtcctggtccatcgttc
gaggatacagagtgctcatttgaaattgaagtggtcatcctgccaaacgactacttcaga
ttaatcaaaatcaagatcatcgtgaaggacaccaatgacaatgctccgatgtttccttcc
cctgtgattaacatttccattcctgaaaacactctcatcaacagccgctttgccattccc
tctgctaccgatcccgacacgggacccaacagcgtccacaaatacgaacttgtgaacgga
cagagtacttttggcttggatattgttgagacacaggaaggagagaagtggccacagctg
attgtccaacaaaatctggaccgggagcaaaaagacacctatgttatgaaaatcaaagtg
gaagacggtgggaatccacagaagtccagcactgctattcttcaggtgacggtaactgat
gtcaatgacaatcgtccggttttcaaagaaagtcagatagaggttcacattcctgaaagc
tctccagttgggacttctgttgtacagctgcaggctacggatgcagatgttgggtccaat
gcagaaatcaaatatatgtttggtacccaagtatctccatccacacggagactctttgcg
ctaaacgctacgactggactaataacagtgcagaggccactcgatagggaagagactgca
attcataagctgtcagttttagcaagtgatggaagctccagtccagcaagagcaactgta
acgatcaatgtgactgatgtgaatgataatgctccaaatatagacctgagatacattatc
agtccaactaacggcactgtaatgctgtctgaaaaagaccccattaacactaaaatagct
cttatcaccgtctcagataaggacacggatgtcaacggcaaggtgatctgctttatcgaa
aaggatgtgccatttcacctcaaagcagtctacgacaaccaatatttattggaaacctca
gcattgttggattatgaagggaccaaggagtacatcttcaaaattgtggcttcggactct
ggtaagcctagcctgaatcagaccgcattggtcaaagtaaagctagaggatgagaatgac
aatccaccaatttttagccagcctgtaatcgaactgtcagtcatggaaaataaccagcgt
gaccttttcctcaccaccattagtgctacagatgaagacagcgggaggaatgcagaaatt
gtctaccagcttggacccaatgcctctttcttcgatttggaccgcaaaactggggtgctg
acggcctcaagggtgtttgacagagaagatcaagataggtttctcttcacagtcacagca
agagataatggcacccgggctttgcagagccaggcggctgtgatagttacaattttagac
gaaaatgacaacagccccaagttcacacacaatcactttcagttctttgtgtctgagaac
ctgccaaagtacagtactgtaggggtgattacagtcacggatgcagatgcaggtgaaaac
gcagaggtgtctctctccattctcaatgataacgagaactttatcctcgatcccttctcc
ggagttatcaaatcaaatgtttccttcgacagagagcagcaaagttcttataccttcgat
gtaagggctgttgacggtggtcgtcctccgtgttcatcggttgccaaggtgaccatcaat
gtcattgatgtcaatgacaacccacctattgtcatctaccctccatcaaacacttccttc
aagctggtaccactttctgccattccgggatctgtagtcgctgaggtttttgctgtggat
ggagatacaggaatgaacgctgaattaaaatacaccatcattagtggtaatggcagagga
cttttcaggattgatcctgttactggaaacattactttagaagagaaacccatgattgca
gatattggcctccatcgtctggtggtcaacattagtgaccttggctatccaaagtctctg
cacacactagttcttgttttcctttatatcaatgacacagtcgggaattcatcttttatc
tacgacctcatccggcgcacaatggagacgccgttggataggaacatcggtgaaagtagc
gaaacctatcagaacgtcgacaatcttaaaaccatcattgccatcgtcacaggcgcaatg
gtggtcatcgtggtgatcttcatcaccgttctggtccgctgccgtcacgtttcgcagttt
aaagctgctcaaaggaagaaacaaggtgctgaatggatgtcacccaatcaggaaaacaag
cagaacaaaaagaaaaagcgcaagaaaaggaagtcacccaaaagctccctgcttaacttc
gtaagcattgaggagaacaaacctgacgatccagcgcacgaacccatcaacggcaccatc
agcatcccagctgagctcgaggagcccgggattggacgttttgactggaacacaacacca
accaccactttcaagcccaatagccctgatttagccaggcactacaagtctgcctcgccc
cagtcggctttccacgtcaaggctgacactccggtttcggtgaaaaagcatcacgtcgtt
caggagctgccgctggacaacactttcgtcggcggatgtgacactctttccaaacggtca
tccactagctctgatcacttcagtgcctcggagtgcagctcccaaggaggcttcaagaca
aaaggggggaccttacacaacagacaggggactctaacacgtactcggactgaactgaac
cctgattatctggacctgcgctctagaactgacctgaacccagaatactggaccccgtgt
acaccattgtctcagcgccgtgtgacctttcaccttcccgacggctctcaggagagctgc
agcgacagcggtttgggtgagcccgagtctgtcgggggaggagctttgctatccaagccc
ctccctctggcacaggaggagttttatgagcaagacaaaagaaccgaagccgatggcaac
tctgatccaaactcggatggacttttagggcctaggggtctcatggaagcaacagagatg
tgtacgcaggagtgtctagtgctcggccactcggataactgctggatgccgcccaaatcg
cccgctcagtcctacggaggcagccagagcgagtggacgaaagacaaactgctgaacggt
cacacactaaaccgcggttggaagagcagccacgagcacttcggagacaggaaatctttc
gccgtagggggagtcagcagtcacatgaccgatatcccattggccagtttaaaatcctat
caggcctcatctggctctgaaaacccaaaggagcagcagctttaa
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