KEGG   Tachysurus vachellii: 132844569
Entry
132844569         CDS       T09596                                 
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like isoform X1
  KO
K11757  protein polybromo-1
Organism
tvc  Tachysurus vachellii
Pathway
tvc03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132844569 (pbrm1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tvc03021]
    132844569 (pbrm1l)
   03036 Chromosome and associated proteins [BR:tvc03036]
    132844569 (pbrm1l)
Transcription machinery [BR:tvc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     132844569 (pbrm1l)
Chromosome and associated proteins [BR:tvc03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    132844569 (pbrm1l)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 MerR-DNA-bind
Other DBs
NCBI-GeneID: 132844569
NCBI-ProteinID: XP_060724127
LinkDB
Position
4:complement(18066456..18080117)
AA seq 1653 aa
MGSKRRRIASPSSSVSGEFDDAASSTPTSSWKRRRTSNATAVDQIAVCSELYNTIRDYKD
EQGRQICELFVRAPKRRNQPDYYDVVSKPIDMMKIQQKLRTEEYQDAEQFSEDFKLLINN
AKAYYPPDSPECRAACKLWALFLATKSSLLPGGDVEDDEEEEESEDADNPGVSTEEEMSP
NYMKGVLEQLLDGLVSYTDPSGRIVSELFQKLPSKLQYPDYYAIIKEPIDFRTIAQRIQM
GHYKSISAMAKDIDLLTKNAKVYNEPGSQVYKDANTIKKAFLQRKTELEQAEPTKSSLRI
RNRRSAQGDPLPAITVSLRPGSESDEDSILSGSVRYDVGEAESESGHTRLSTGDPIFQLY
QAVRGARNTQGQLLAEPFLHLPSRREYPDYFQQIKHPISIQQIREKMRNGEYEGVEQMES
DLNSMFENAKRYNVPSSAIYKRAQKLQHIMQLKRRELRDDDEGDSLLSTVTPETGSSKRK
SHKKNTKKNRMKALYAAVTEAREAGTGRRLCDLFMVKPSKKDYPDYYQVIFEPMDLRTIE
SNIRSERYVSEEALMNDMKLMFRNARHYNEEGSQVYNDADILEKIVKEKQKELGPLPEDD
DVGSPKLKLRRSGGATSPKKARSQTSLQQKLGELYEAVRSFTDSRGRRLSTVFLRLPSRS
ELPDYYAAIKRPIDMERVRSYMVQGRYQDIESMAEDFILMFNNACTYNEPESLIYRDALL
LHRAFLDARRNLEKEEEEGEERMGAQVAVAPLVCELIRNLFVSVMSHQDDEGRCYSDSLA
EVPSVDPTNAEEPPLSLDIIRNNVERGRYRRLDVFQEHFFEVLDKARRLNRTDSEIFEDS
IELQQFFLKIRDELCKNGEILLTPALSYTSRHLHADVEQEKREKLPREMEEDRLKIEEDK
KEEKAEGVTGGQWTSSLKNTYSQDCSFENSTYSVGDYVYVQPSEANLQPHIVSIEKLWKD
EAGEQWLYGCWFYRPGETFHLAIRKFLEKEVFKSDYYNNVPFSKILGKCMVVFVKDYFKY
QPEGFKPEDVYVCESRYTTRTKAFKKIKIWTMPPSSVKLISRDVPLPVVRVASMFVSAAN
RDQDKMADSADDHGSFIEKEREAVPVEVSNGEPGCQYYEQLCYNNMWLKVGDCVYIRSHR
LTRPRIGRIEKMWEQDGVPFFFGPIFIHPEETEHEPTKMFYKREVFLSNLEETSPMMCIL
GKCVVSSFKDFISCRPTEFAEENVHLCESRYIESEKQMKKFKGLKRFSLSGKVVDDEIYY
FRKPLVPSKEASPLLDKKIEELEAKFADIEDLDEDLDEMEDEDDEAPATPSLPQHQSSIA
SDMDLPNTPLQSTPKTVKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSR
LVGTEWRNLESTKKSEYEERAAKLVEQQERERALQQQQAAASPRAGTPAGSLMGVVPPPS
SMGMLNQAMPGMMGNYGPPFMPIQGPPDGMMGMGGTPPHPMGVPALPPQHYFTSGMAGYP
GMPPSGGMGPGINGMAGSPGPGNPYGLQMGAYGPGQVAPPPYPGQSQLGQSVHQPQGPPM
FVAPPPRPQRLLHSEAYLKYIEGLSADCPTISKWDQSLKAQRKDSRLSREQESRLPSHWL
KSKGAHTTMVDALWRLRDLMMRDTLSIRQAYNL
NT seq 4962 nt   +upstreamnt  +downstreamnt
atgggctccaagagacgacgcatcgcttctccctccagcagtgtgagtggagagtttgat
gatgccgcttcatcaactccaaccagcagctggaaaaggaggaggacttctaatgctact
gctgttgatcaaattgctgtttgcagtgaattgtacaacactatcagggactacaaagat
gagcaagggaggcagatctgtgagctctttgttcgtgctccgaaaagaaggaatcagcca
gattactacgacgtggtgagcaagcccattgacatgatgaagatccaacagaagctcagg
acagaagagtaccaagatgcagagcagttctctgaagattttaagctacttataaacaat
gccaaagcttactatccgcctgatagtccagagtgcagggccgcctgtaagttgtgggct
ctgtttctagccacaaagagtagccttcttcctggaggagatgtcgaagatgatgaggaa
gaagaggaaagtgaagatgctgataacccaggagtctccacagaggaggagatgtcaccc
aactatatgaaaggggtcctagagcagctgttggatggtcttgtatcttatactgaccct
tcagggagaatagttagtgaacttttccagaaactgccctctaaactgcaatacccagac
tactatgccataatcaaagagccaatagattttcgaaccatagctcagaggatacagatg
ggacattacaaatccatcagtgccatggccaaggacattgatcttttgaccaaaaatgcc
aaagtctacaatgaacctggatcacaagtttataaggatgcaaacacaataaagaaggcc
tttttgcagaggaaaactgaactcgagcaggcagaaccaacaaaatccagcctccgcatc
aggaatcggaggtcagctcagggcgatcctttgcctgctattaccgtgtctctgcggcct
ggctcagagagcgatgaagactccattctctcaggctctgtgcgatatgatgttggggag
gcggagtctgagagcgggcacactcgactatctactggtgacccaatctttcagctgtac
caagctgtcagaggggcccgtaacactcagggtcagctccttgctgagccattccttcat
ctaccatcacgcagagagtaccctgattacttccagcagatcaaacaccccatttctatc
cagcaaatcagagaaaaaatgcgaaacggagagtacgagggagtcgagcaaatggaatca
gaccttaattctatgtttgagaatgctaaacgctacaatgttcccagttcagccatttac
aagcgtgctcagaaattacagcacataatgcagttaaaaaggagagaacttcgagatgac
gacgaaggagacagtttgctgtccaccgtgacacccgagacaggaagcagtaagagaaaa
agtcataagaagaacacaaagaaaaacaggatgaaagcattgtatgcagcagtgaccgag
gcacgagaggcaggtacaggtcggcgcctctgcgacctcttcatggtgaagccatcgaaa
aaggactaccctgattactaccaggttatctttgagcccatggaccttcgcaccattgag
agcaatattcgcagcgagcgctacgtcagcgaggaggctctcatgaacgacatgaagctc
atgttccgcaatgctcgccactacaacgaggaaggctctcaggtttacaatgatgcagac
attctggaaaagattgtaaaggaaaaacagaaggaacttggacctttacctgaggatgat
gatgttggctcacccaaacttaaactacggaggagtgggggtgctacatctcccaaaaag
gcccgctctcagacgtctctacagcagaaactgggcgaactctatgaagctgtccgcagt
ttcacagacagccgtggacgtcgtctgagcacagtgttcctgcgtctgccgtcacgctct
gagctccctgattactacgctgccatcaaacgccccattgacatggagcgcgtgcgcagt
tacatggtccagggccgctatcaggacattgagtcaatggctgaggattttatacttatg
tttaacaacgcctgtacatacaatgaacctgagtcactcatctaccgtgacgcactgctg
ctccacagagccttccttgatgcacgacgcaacctggagaaggaggaagaggagggagag
gaaagaatgggagctcaagtggccgtcgcgccattagtttgcgagctcattcggaacctc
tttgtgtcagtgatgagccatcaggatgatgagggccggtgctacagtgactcgctcgca
gaggtgccctcagtggatcctaccaatgcagaggaaccacctcttagcttggatattatc
cgcaacaacgtagagcgtggacgctatcggaggctggatgtgtttcaggagcattttttt
gaggtgctggataaagccagacgcctcaacagaacggactctgaaatctttgaggactcg
attgagctgcagcagttctttctgaagatccgagacgagctatgcaagaatggtgagatc
ctactcactccagcactgagctacacatccaggcatctgcatgcagatgtggagcaggag
aagagagaaaaactgcctcgggaaatggaggaagatcgactcaaaattgaggaagacaaa
aaagaggagaaggcagagggtgttacgggtggacagtggacatctagccttaagaacacc
tatagtcaagactgcagctttgagaacagcacctacagtgtaggagattatgtgtacgtg
cagccgtctgaagccaacttgcagccccacatcgtaagcatcgagaaactgtggaaggat
gaggctggagagcagtggctgtatggctgctggttttatcgaccaggcgagaccttccac
ctggctatacgcaagttcctggaaaaggaagtattcaagagtgactattacaacaatgtt
ccattcagtaagatactggggaaatgtatggtggtgtttgtaaaggattattttaaatac
cagcccgagggcttcaagcctgaggacgtctacgtttgtgagtctcgttacacaacccgg
accaaagccttcaagaagatcaaaatatggactatgccaccaagctctgtgaaattaatc
tctcgcgatgtgccattacctgtagtcagagttgcgtccatgttcgtcagcgctgcaaat
cgtgaccaggacaagatggcagactctgctgacgatcatggtagctttattgagaaagag
agagaggctgttcctgtggaggtgtctaatggtgagcctggatgtcagtactacgaacag
ctatgctacaataacatgtggttgaaagtgggtgattgtgtctacattcgatctcatcgc
ttgacgcgtccacgaattggcaggattgaaaagatgtgggagcaggatggagttcctttc
ttctttgggccgatattcatccaccctgaggagacagaacatgagcccacaaagatgttc
tacaagcgtgaagtgttcctgagcaacctggaggagacctctcccatgatgtgcatttta
ggaaagtgtgttgtctcttcctttaaggactttatttcctgtagaccaactgaatttgca
gaggagaatgtacacttgtgtgagagccgctacattgaaagtgagaagcagatgaaaaaa
tttaaaggcctcaaacgattttccctgtcaggcaaagtggtggatgatgagatctactac
ttcagaaagccgcttgtgccttccaaggaagcatccccgctgctggataaaaaaattgaa
gagctagaggccaaatttgcagatatagaggacctggatgaagatctagatgagatggaa
gatgaggatgatgaagcgccagcgacaccttcattgccccagcatcagtcttcaattgct
agtgatatggaccttcctaacacaccgctacagtccacaccaaagaccgtaaaaggtcta
tccaagaaagaaggagccaagcgcaagatcaacatgagtggctacattctgtttagcagt
gagatgagagctgtcataaaggctcaacacccagatttctcttttggagagttgagtcgt
cttgttggtacagagtggaggaacctggaatctactaagaagtcggagtatgaagagcga
gcagctaaactggtagaacagcaggaacgagaaagggccctccagcagcagcaggcggca
gcttccccaagagcaggtaccccagccgggtctctgatgggggtggtgccccccccaagc
tctatggggatgctaaaccaagccatgccaggcatgatgggaaattatggcccacccttc
atgcctatacagggtcctcctgatggcatgatgggtatgggtggcacacctcctcatccc
atgggggtgcccgcgttgccacctcaacactactttacatcaggcatggctgggtaccct
ggtatgcccccttctggtggaatgggacctggtattaatggtatggctggaagccctggt
ccaggaaacccttatggtcttcagatgggtgcatatggcccagggcaggtggcgccacct
ccatacccaggtcagagtcagctgggtcagtctgtccaccaaccacaaggcccacccatg
ttcgtagcaccacctcccaggccacagcgtctcctgcattcagaagcctaccttaaatac
atagaagggctcagtgcagattgtcccactatcagcaaatgggatcagagccttaaggct
caaagaaaagactctcgcctcagtagagagcaggagagccgtcttccttctcattggctg
aagagcaaaggtgctcacaccacaatggtggatgcgttgtggcgactgagagatttaatg
atgagagacactctcagcatccgacaagcttacaacctttaa

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