Tachysurus vachellii: 132844569
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Entry
132844569 CDS
T09596
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like isoform X1
KO
K11757
protein polybromo-1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132844569 (pbrm1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132844569 (pbrm1l)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132844569 (pbrm1l)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132844569 (pbrm1l)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
132844569 (pbrm1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
MerR-DNA-bind
Motif
Other DBs
NCBI-GeneID:
132844569
NCBI-ProteinID:
XP_060724127
LinkDB
All DBs
Position
4:complement(18066456..18080117)
Genome browser
AA seq
1653 aa
AA seq
DB search
MGSKRRRIASPSSSVSGEFDDAASSTPTSSWKRRRTSNATAVDQIAVCSELYNTIRDYKD
EQGRQICELFVRAPKRRNQPDYYDVVSKPIDMMKIQQKLRTEEYQDAEQFSEDFKLLINN
AKAYYPPDSPECRAACKLWALFLATKSSLLPGGDVEDDEEEEESEDADNPGVSTEEEMSP
NYMKGVLEQLLDGLVSYTDPSGRIVSELFQKLPSKLQYPDYYAIIKEPIDFRTIAQRIQM
GHYKSISAMAKDIDLLTKNAKVYNEPGSQVYKDANTIKKAFLQRKTELEQAEPTKSSLRI
RNRRSAQGDPLPAITVSLRPGSESDEDSILSGSVRYDVGEAESESGHTRLSTGDPIFQLY
QAVRGARNTQGQLLAEPFLHLPSRREYPDYFQQIKHPISIQQIREKMRNGEYEGVEQMES
DLNSMFENAKRYNVPSSAIYKRAQKLQHIMQLKRRELRDDDEGDSLLSTVTPETGSSKRK
SHKKNTKKNRMKALYAAVTEAREAGTGRRLCDLFMVKPSKKDYPDYYQVIFEPMDLRTIE
SNIRSERYVSEEALMNDMKLMFRNARHYNEEGSQVYNDADILEKIVKEKQKELGPLPEDD
DVGSPKLKLRRSGGATSPKKARSQTSLQQKLGELYEAVRSFTDSRGRRLSTVFLRLPSRS
ELPDYYAAIKRPIDMERVRSYMVQGRYQDIESMAEDFILMFNNACTYNEPESLIYRDALL
LHRAFLDARRNLEKEEEEGEERMGAQVAVAPLVCELIRNLFVSVMSHQDDEGRCYSDSLA
EVPSVDPTNAEEPPLSLDIIRNNVERGRYRRLDVFQEHFFEVLDKARRLNRTDSEIFEDS
IELQQFFLKIRDELCKNGEILLTPALSYTSRHLHADVEQEKREKLPREMEEDRLKIEEDK
KEEKAEGVTGGQWTSSLKNTYSQDCSFENSTYSVGDYVYVQPSEANLQPHIVSIEKLWKD
EAGEQWLYGCWFYRPGETFHLAIRKFLEKEVFKSDYYNNVPFSKILGKCMVVFVKDYFKY
QPEGFKPEDVYVCESRYTTRTKAFKKIKIWTMPPSSVKLISRDVPLPVVRVASMFVSAAN
RDQDKMADSADDHGSFIEKEREAVPVEVSNGEPGCQYYEQLCYNNMWLKVGDCVYIRSHR
LTRPRIGRIEKMWEQDGVPFFFGPIFIHPEETEHEPTKMFYKREVFLSNLEETSPMMCIL
GKCVVSSFKDFISCRPTEFAEENVHLCESRYIESEKQMKKFKGLKRFSLSGKVVDDEIYY
FRKPLVPSKEASPLLDKKIEELEAKFADIEDLDEDLDEMEDEDDEAPATPSLPQHQSSIA
SDMDLPNTPLQSTPKTVKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSR
LVGTEWRNLESTKKSEYEERAAKLVEQQERERALQQQQAAASPRAGTPAGSLMGVVPPPS
SMGMLNQAMPGMMGNYGPPFMPIQGPPDGMMGMGGTPPHPMGVPALPPQHYFTSGMAGYP
GMPPSGGMGPGINGMAGSPGPGNPYGLQMGAYGPGQVAPPPYPGQSQLGQSVHQPQGPPM
FVAPPPRPQRLLHSEAYLKYIEGLSADCPTISKWDQSLKAQRKDSRLSREQESRLPSHWL
KSKGAHTTMVDALWRLRDLMMRDTLSIRQAYNL
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaagagacgacgcatcgcttctccctccagcagtgtgagtggagagtttgat
gatgccgcttcatcaactccaaccagcagctggaaaaggaggaggacttctaatgctact
gctgttgatcaaattgctgtttgcagtgaattgtacaacactatcagggactacaaagat
gagcaagggaggcagatctgtgagctctttgttcgtgctccgaaaagaaggaatcagcca
gattactacgacgtggtgagcaagcccattgacatgatgaagatccaacagaagctcagg
acagaagagtaccaagatgcagagcagttctctgaagattttaagctacttataaacaat
gccaaagcttactatccgcctgatagtccagagtgcagggccgcctgtaagttgtgggct
ctgtttctagccacaaagagtagccttcttcctggaggagatgtcgaagatgatgaggaa
gaagaggaaagtgaagatgctgataacccaggagtctccacagaggaggagatgtcaccc
aactatatgaaaggggtcctagagcagctgttggatggtcttgtatcttatactgaccct
tcagggagaatagttagtgaacttttccagaaactgccctctaaactgcaatacccagac
tactatgccataatcaaagagccaatagattttcgaaccatagctcagaggatacagatg
ggacattacaaatccatcagtgccatggccaaggacattgatcttttgaccaaaaatgcc
aaagtctacaatgaacctggatcacaagtttataaggatgcaaacacaataaagaaggcc
tttttgcagaggaaaactgaactcgagcaggcagaaccaacaaaatccagcctccgcatc
aggaatcggaggtcagctcagggcgatcctttgcctgctattaccgtgtctctgcggcct
ggctcagagagcgatgaagactccattctctcaggctctgtgcgatatgatgttggggag
gcggagtctgagagcgggcacactcgactatctactggtgacccaatctttcagctgtac
caagctgtcagaggggcccgtaacactcagggtcagctccttgctgagccattccttcat
ctaccatcacgcagagagtaccctgattacttccagcagatcaaacaccccatttctatc
cagcaaatcagagaaaaaatgcgaaacggagagtacgagggagtcgagcaaatggaatca
gaccttaattctatgtttgagaatgctaaacgctacaatgttcccagttcagccatttac
aagcgtgctcagaaattacagcacataatgcagttaaaaaggagagaacttcgagatgac
gacgaaggagacagtttgctgtccaccgtgacacccgagacaggaagcagtaagagaaaa
agtcataagaagaacacaaagaaaaacaggatgaaagcattgtatgcagcagtgaccgag
gcacgagaggcaggtacaggtcggcgcctctgcgacctcttcatggtgaagccatcgaaa
aaggactaccctgattactaccaggttatctttgagcccatggaccttcgcaccattgag
agcaatattcgcagcgagcgctacgtcagcgaggaggctctcatgaacgacatgaagctc
atgttccgcaatgctcgccactacaacgaggaaggctctcaggtttacaatgatgcagac
attctggaaaagattgtaaaggaaaaacagaaggaacttggacctttacctgaggatgat
gatgttggctcacccaaacttaaactacggaggagtgggggtgctacatctcccaaaaag
gcccgctctcagacgtctctacagcagaaactgggcgaactctatgaagctgtccgcagt
ttcacagacagccgtggacgtcgtctgagcacagtgttcctgcgtctgccgtcacgctct
gagctccctgattactacgctgccatcaaacgccccattgacatggagcgcgtgcgcagt
tacatggtccagggccgctatcaggacattgagtcaatggctgaggattttatacttatg
tttaacaacgcctgtacatacaatgaacctgagtcactcatctaccgtgacgcactgctg
ctccacagagccttccttgatgcacgacgcaacctggagaaggaggaagaggagggagag
gaaagaatgggagctcaagtggccgtcgcgccattagtttgcgagctcattcggaacctc
tttgtgtcagtgatgagccatcaggatgatgagggccggtgctacagtgactcgctcgca
gaggtgccctcagtggatcctaccaatgcagaggaaccacctcttagcttggatattatc
cgcaacaacgtagagcgtggacgctatcggaggctggatgtgtttcaggagcattttttt
gaggtgctggataaagccagacgcctcaacagaacggactctgaaatctttgaggactcg
attgagctgcagcagttctttctgaagatccgagacgagctatgcaagaatggtgagatc
ctactcactccagcactgagctacacatccaggcatctgcatgcagatgtggagcaggag
aagagagaaaaactgcctcgggaaatggaggaagatcgactcaaaattgaggaagacaaa
aaagaggagaaggcagagggtgttacgggtggacagtggacatctagccttaagaacacc
tatagtcaagactgcagctttgagaacagcacctacagtgtaggagattatgtgtacgtg
cagccgtctgaagccaacttgcagccccacatcgtaagcatcgagaaactgtggaaggat
gaggctggagagcagtggctgtatggctgctggttttatcgaccaggcgagaccttccac
ctggctatacgcaagttcctggaaaaggaagtattcaagagtgactattacaacaatgtt
ccattcagtaagatactggggaaatgtatggtggtgtttgtaaaggattattttaaatac
cagcccgagggcttcaagcctgaggacgtctacgtttgtgagtctcgttacacaacccgg
accaaagccttcaagaagatcaaaatatggactatgccaccaagctctgtgaaattaatc
tctcgcgatgtgccattacctgtagtcagagttgcgtccatgttcgtcagcgctgcaaat
cgtgaccaggacaagatggcagactctgctgacgatcatggtagctttattgagaaagag
agagaggctgttcctgtggaggtgtctaatggtgagcctggatgtcagtactacgaacag
ctatgctacaataacatgtggttgaaagtgggtgattgtgtctacattcgatctcatcgc
ttgacgcgtccacgaattggcaggattgaaaagatgtgggagcaggatggagttcctttc
ttctttgggccgatattcatccaccctgaggagacagaacatgagcccacaaagatgttc
tacaagcgtgaagtgttcctgagcaacctggaggagacctctcccatgatgtgcatttta
ggaaagtgtgttgtctcttcctttaaggactttatttcctgtagaccaactgaatttgca
gaggagaatgtacacttgtgtgagagccgctacattgaaagtgagaagcagatgaaaaaa
tttaaaggcctcaaacgattttccctgtcaggcaaagtggtggatgatgagatctactac
ttcagaaagccgcttgtgccttccaaggaagcatccccgctgctggataaaaaaattgaa
gagctagaggccaaatttgcagatatagaggacctggatgaagatctagatgagatggaa
gatgaggatgatgaagcgccagcgacaccttcattgccccagcatcagtcttcaattgct
agtgatatggaccttcctaacacaccgctacagtccacaccaaagaccgtaaaaggtcta
tccaagaaagaaggagccaagcgcaagatcaacatgagtggctacattctgtttagcagt
gagatgagagctgtcataaaggctcaacacccagatttctcttttggagagttgagtcgt
cttgttggtacagagtggaggaacctggaatctactaagaagtcggagtatgaagagcga
gcagctaaactggtagaacagcaggaacgagaaagggccctccagcagcagcaggcggca
gcttccccaagagcaggtaccccagccgggtctctgatgggggtggtgccccccccaagc
tctatggggatgctaaaccaagccatgccaggcatgatgggaaattatggcccacccttc
atgcctatacagggtcctcctgatggcatgatgggtatgggtggcacacctcctcatccc
atgggggtgcccgcgttgccacctcaacactactttacatcaggcatggctgggtaccct
ggtatgcccccttctggtggaatgggacctggtattaatggtatggctggaagccctggt
ccaggaaacccttatggtcttcagatgggtgcatatggcccagggcaggtggcgccacct
ccatacccaggtcagagtcagctgggtcagtctgtccaccaaccacaaggcccacccatg
ttcgtagcaccacctcccaggccacagcgtctcctgcattcagaagcctaccttaaatac
atagaagggctcagtgcagattgtcccactatcagcaaatgggatcagagccttaaggct
caaagaaaagactctcgcctcagtagagagcaggagagccgtcttccttctcattggctg
aagagcaaaggtgctcacaccacaatggtggatgcgttgtggcgactgagagatttaatg
atgagagacactctcagcatccgacaagcttacaacctttaa
DBGET
integrated database retrieval system