Tachysurus vachellii: 132844606
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Entry
132844606 CDS
T09596
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132844606 (ddx27)
03009 Ribosome biogenesis [BR:
tvc03009
]
132844606 (ddx27)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132844606 (ddx27)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132844606 (ddx27)
Ribosome biogenesis [BR:
tvc03009
]
Eukaryotic type
Pre-60S particles
Helicases
132844606 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132844606
NCBI-ProteinID:
XP_060724212
LinkDB
All DBs
Position
4:19297873..19311517
Genome browser
AA seq
769 aa
AA seq
DB search
MLSDFDLIGTIVDDADVPEEEESGSDDEEQPIVLSKEKRALKRRGNGDFNADFEFEERDG
LYSGDWAMADVMSQLKKRKAPTTLDEKIEKVRKKRKIEEKEKGGGKSGSATKEKEEGEDA
EGDNDAEHDDDVDGSDDAGEDGEDHTDEDEFNSGDEVVLKKADTIREKGKKGKRKAAEEP
EAFFEDASQYDENLTFPDMNLSRPLLKAITTMGFKQPTPIQKACVPVGLLGKDICACAAT
GTGKTAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARELAQFTNITTCLAV
GGLDLKSQEAALRLGPDVLIATPGRLIDHLHNTPSFELSQIEVLILDEADRMLDEYFEEQ
MKEIIRMCSYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRP
AREGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLE
SLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSV
SLVGETERKMLKEIVRKAKTPVKARVIPQEVILKFRDLIEKLEKDVYAVLRWEREEKEMV
HSEAQISVAQKRLTQKSDEKQPARSWFQTHEERKKERMSKALQDFDLALRGKKKRAQFLK
DSKKKVLSAEERAQFEMLKSQMFAERSAKRDRKPKRARVVPEDEPKNTASKQKGGKPTKK
SVFDKELTNVSKKVLKQYRSGPSFEDRKRLGLANKKGGRFKSKAKFRRK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagattttgatctgatcggaactattgttgacgacgcagatgtaccagaagaa
gaggaatcgggctcagatgatgaggagcaacccatcgtgttgagtaaggagaagagggcg
ctaaaaagacgaggcaatggagacttcaacgcagactttgagtttgaagagagagatggg
ctgtacagtggggactgggccatggcagatgttatgagccaacttaaaaagagaaaagca
cccaccacactggatgagaagatagagaaagtgcgtaagaagcgcaaaattgaggagaaa
gagaaaggaggcggcaaaagtggttcagcgaccaaggaaaaggaggagggagaggatgct
gaaggtgataatgatgctgaacatgatgatgatgttgatggcagtgatgatgcaggtgaa
gatggggaggatcacactgatgaggatgagtttaattctggggatgaagttgttctcaaa
aaagcagatacaataagagaaaaaggcaagaaaggaaaaagaaaggcagcagaagagcct
gaagccttctttgaagatgcctcgcagtatgatgaaaacctaacattcccggacatgaat
ctgtcaagaccactgctgaaggccatcaccaccatgggcttcaagcagcctacacctatc
cagaaagcgtgtgttccagtgggtttactggggaaggacatctgtgcttgtgctgctact
ggaaccggtaagactgcagcgttcatgttgcctgtactggagcgtctcatttataagccg
agagaaacgcaggtaacacgtgtccttgtgctggtacccacccgagagttgggtatccaa
gtgcacactgtagcacgtgagctggctcagttcaccaacatcaccacctgcttggctgtg
ggcggcttggacctgaaatctcaagaggcggcgctgaggctggggcctgacgtcctgatc
gccacgcctggccgcttgatcgatcacttacacaacacgccgtcgtttgagcttagtcaa
atcgaggtgcttattctggatgaggctgacaggatgttggatgaatatttcgaggagcag
atgaaggagattatccggatgtgctcttatcagagacagactatgttgttctctgcaacc
atgagtgaagaggtgaaggatctggcctcagtgtcactgaagcaaccagtgcgaatcttt
gtgaacagtaacacagatgtggctccatacctcagacaggaatttgtaaggattcgacca
gccagagaaggagacagagaggctatagttgcagcgctcctcacacgcacctttcaggac
catgtcatgttgttcacccagactaagaaacaggcccaccgcatgcacatcctcctcggc
ctcatggggttaaaggttggagagctgcatggaaacctgtctcagacacaaagactggaa
agtctcaggcgatttaaagatgagcagattgacatcctggtggccacagatgtagcagcc
agaggtctggatattgaaggagtcaaaacagttataaacttcaccatgccaaacacagtg
aagcattatgtgcacagagtgggccgcacagcgcgagcagggaaagtaggtcgctctgtg
tcgctggtcggagaaaccgagaggaagatgctgaaggagatcgtcagaaaagccaaaact
cctgttaaagctcgtgttattcctcaggaggtgattctgaagttcagagatctgattgag
aagttagagaaggatgtatatgccgtcttacgttgggagagagaagagaaagagatggtg
cattcagaagcacagatcagtgtggctcagaagaggctaacacagaaatcagatgagaaa
caaccagcaaggtcatggttccaaacccatgaggagaggaagaaggagcgaatgagcaaa
gcacttcaggacttcgacttggccttaagggggaagaagaagcgtgctcagttcttgaaa
gacagcaagaagaaagtgttgtcggctgaagaaagagctcaatttgaaatgcttaagtct
cagatgtttgctgagcgttctgcaaaacgtgaccgcaagccaaagagagccagagtagtg
ccagaagatgagcccaaaaacacagcctcaaaacaaaaaggtggaaaacctacgaagaag
tctgtgtttgacaaggagctcactaacgtcagcaagaaagtcctgaagcaatacagatcc
gggccttcctttgaggacagaaaaagactaggccttgcaaataagaaaggaggacgcttt
aaatccaaagccaagttcaggaggaagtga
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