KEGG   Tachysurus vachellii: 132844694
Entry
132844694         CDS       T09596                                 
Symbol
sdc4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
tvc  Tachysurus vachellii
Pathway
tvc04512  ECM-receptor interaction
tvc04514  Cell adhesion molecule (CAM) interaction
tvc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132844694 (sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    132844694 (sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132844694 (sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tvc00535]
    132844694 (sdc4)
Proteoglycans [BR:tvc00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   132844694 (sdc4)
SSDB
Motif
Pfam: Syndecan DUF8063 Holin_BhlA
Other DBs
NCBI-GeneID: 132844694
NCBI-ProteinID: XP_060724395
LinkDB
Position
4:23580256..23588410
AA seq 188 aa
MLKVSVVLVLLAATAFAESVQETETWMPPKAGESHDDLVSSGDFVFNNEERAIDEEDDYE
DIEVYDDMSGSGDIETITKTYEPEEIDNSIPDIEPSGQPHPTVNEIKLVRENEVGHHPSV
QLSHAGEQNIFNKTEVLAAVIAGGAVGLLFAVLLILLLVYRMKKKDEGSYDLGKKPIYKK
APTTEIYA
NT seq 567 nt   +upstreamnt  +downstreamnt
atgctgaaagtgtccgtcgtgttggttttattggctgctactgccttcgccgagtcggta
caagagacagaaacatggatgcctccaaaggctggggaatcacatgatgacctggtttca
tctggtgatttcgtttttaataatgaggaaagagcaatcgatgaagaggacgattatgag
gacattgaagtctatgatgatatgtcaggttctggtgatatcgagacgataacgaaaacc
tatgagcctgaagaaattgataacagcatcccagacatagagccatcgggtcagcctcac
ccaacagttaatgaaattaaactggtgagagagaacgaagttggtcaccatcccagtgtc
cagctgtctcatgcaggagaacagaacatctttaacaaaactgaagtgcttgccgctgtt
attgctggtggtgctgttgggctgctttttgccgtgcttctcatccttctccttgtctat
cgcatgaagaaaaaggacgaaggcagctacgatttgggcaagaaacctatttacaagaaa
gctccaactaccgagatctacgcatga

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