Tachysurus vachellii: 132844728
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Entry
132844728 CDS
T09596
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132844728 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132844728 (nhej1)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
132844728 (nhej1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
132844728
NCBI-ProteinID:
XP_060724459
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Position
4:complement(24513906..24525064)
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AA seq
323 aa
AA seq
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MENTGHAEGALSTLPWVHVNVGGSKLLAKAWFGDTEYRLLLSDLSSVWEEEMSRNDIKSR
AQVLNKRLRAPVHAFFAHLRSVAWPCFSRQSSEQNTSIQFRLVHHEGHLTVKLKSEMGDV
PFYWEFHCSPASVALVSRELVSPLLSMTQVLHRHVGELTSLLLKKDAEIQDYKENGAVLS
RGRLQTEPFDEEIYRKNFIQRLPQMLQDSLEFDSELQELYVSIRDARNTQKRKRSPEYSS
ASVDSFIPDQDQTSCVPTGMRPASFRSDANRIMQQAEDTQSANTKETVRLPLPVSAASAV
PPVVTPAGRSDMPKKTKATGLFQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggagaatacaggccatgctgagggagcgttgtccactttgccatgggtgcatgtgaat
gtcgggggttccaagttgttggccaaagcctggtttggtgacacagaatatcgattgctg
ctgagtgacctgagcagcgtttgggaggaagagatgagcagaaacgacatcaaaagccgt
gctcaggttctaaataaacgtctaagggctccagtacatgcattttttgctcacctgcgc
tcagtggcttggccttgtttctccagacaatcttctgaacagaacacatctatacagttc
cgtctcgtgcatcatgagggccatctaacagtgaaactcaagagtgagatgggagatgta
ccattctactgggaattccactgcagccctgcctcagtagcattggtttccagagagcta
gtgagtcccttgttgtctatgactcaagtgctgcataggcatgttggagaactaacttct
ttgttgctcaagaaagacgctgagatacaagactacaaagagaatggagcagtgcttagt
agaggtaggcttcagactgagccatttgatgaagagatatacagaaagaacttcatccag
agacttccacagatgttgcaggacagtctggaatttgattctgagctgcaagagctgtat
gtgtctatacgtgatgcgagaaatacccagaaacgcaagcgatctcccgaatacagctct
gcttcagtagacagctttatccctgaccaggaccagaccagctgtgtgccaacaggtatg
aggcctgcctcttttcggtctgatgctaatcgtataatgcagcaagcagaagacacacag
tctgctaacaccaaagagactgtcagactcccgttacccgtttctgctgcttctgctgtt
cctcctgtagtcacacctgcaggcagatcagatatgccaaagaagacaaaagcaacaggg
ctcttccagtga
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