Tachysurus vachellii: 132844852
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Entry
132844852 CDS
T09596
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132844852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132844852
03036 Chromosome and associated proteins [BR:
tvc03036
]
132844852
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132844852
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132844852
Chromatin remodeling factors
BAF complex
132844852
PBAF complex
132844852
GBAF(ncBAF) complex
132844852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
132844852
NCBI-ProteinID:
XP_060724670
LinkDB
All DBs
Position
4:28211078..28230186
Genome browser
AA seq
1603 aa
AA seq
DB search
MSTPDPPLGPSPGPGPSPGPMMGPGPSPGSSHGMMGPSPGPSTTSGHSVPQQGAAGYTQQ
DSMHSMHKSLEGLHEKNVGEESRFGQMKGVSMRAGGHAGMGPPPSPMDQHSQGYPSPLGS
SDHVSSPLPAGAPPTSGPLLSSSCTSSSPLEGTDSQPNRSGAQSNTPGTSANPTPFNQNQ
LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQGQTMPSLPPGGGGGPGTGPGP
LGPNYSRGHVLSGPNVPPSGPNAVPPANGPPKTWPEGPMVNAATPSNAPQKLIPPQPTGR
PSPVPPSVPPAASPVMPPQTQSPGHPGHSAQPAPTIPVHQKHNRITPMQKPCGLDPVEIL
QEREYRLEARITHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD
AALETALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFK
EYHRSITGKIQKLTKAVSTYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKD
KRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQPLALGPDGEPL
DETSQMSDLPVKVIHVDSGKILSGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDTGSDEDE
EEEEEPQPSQAPVEEKKKIPDPDSEDVSEVDARHIIEHAKQDVDDEYGGAAFTCGLQSYY
SVAHAVTEKVDRQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEYKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGK
FNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT
KTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGADLYRASGKFEVLDRILPKL
RATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKMFNDPESQYFIF
LLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQM
IARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELPTWIMKDDAEVERLTCEEEAEK
MFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEEEVRHKKTTRKRKRDRDIDAGPST
SGTRGARDKDDDTKRQKKRGRPPAEKITPNPPSLTKKMKKIVEAVIKYKESSNGRQLSEV
FIQLPSRKELPEYYELIRRPVDFRKIKERIRSHRYRSLNDLERDVMLLCQNAQTFNLEGS
LIYEDSIVLQSVFTSLRQKIEKEEESDGEESEEEEEEQDEGSESESRSVKVKIKLGRKER
GAERGKGRRRGGRTRAKPVVSDDDTEDEREEERSNTASDEDQG
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagatcctccgttaggcccttcccctggtcctgggccttctcctgggcca
atgatggggcctggaccatcacctggatcttcccatggcatgatgggtccaagcccagga
ccctccaccacatccggtcactctgtccctcagcaaggagccgctggttacacacagcag
gacagtatgcactccatgcacaaatctctggagggtctgcatgagaagaatgtaggagag
gaatctcgttttggtcagatgaaaggtgtgtccatgagagctggtggacatgctggcatg
gggcctccaccaagtcctatggaccaacactcccaaggctacccctctccgctgggctcc
tcagatcacgtctccagtcctctcccagctggtgcccctcctacatctggtcctttactt
tcttcttcttgcacctcctccagtccactagagggcactgactcccagccgaaccgctct
ggggctcagagcaacacacccggaacctccgccaaccccacaccttttaaccaaaaccag
ctgcaccagcttagggcacaaatcatggcctacaagatgctggcacgtggacagcctctg
cccgaccatctacagatggcagtacagggcaagaggcccatgccaggcatgcagcaaggc
cagaccatgccaagtctgccccctggtggaggaggagggccaggtacaggtcctggacct
ctgggacccaactatagtcgagggcatgtgttgagtggaccaaatgtgcccccgtcaggc
ccaaatgccgttccccctgccaacgggccaccaaaaacctggcctgagggtcccatggtg
aacgcagccacgccttctaatgctcctcaaaagctgatacctccacaacccactggccgg
ccatctccagtgcccccctctgtgccccctgctgcctccccggtcatgccccctcagact
cagtctcctggacaccctgggcactcggcccagccagcgcccaccatccctgtgcatcag
aaacacaaccgaatcactcccatgcagaaaccctgcggcctggaccctgtggagatccta
caggagagagagtacaggctcgaagcacgtataacacaccgtatccaggagctagagaat
cttccaggctcactagctggagacctgcgtacgaaagccactatcgagctcaaagctctg
cgactgctcaactttcagagacagctgcgtcaagaggtggtggtgtgtatgaggcgtgac
gcggctcttgagacggctctggatgcgaaggcttataagcgcagtaagagacaatccttg
cgagaggctcgaatcacagagaaactggagaaacagcaaaagatcgaacaggaacgcaaa
cgacgacagaaacatcaggaatatctaaacagcatcctccagcatgccaaagactttaaa
gaataccatcgttccatcactggaaagatccagaagctgaccaaagctgtgtctacgtac
cacgccaacacagagcgagagcagaagaaagagaatgaacgcatcgagaaggagaggatg
aggagactgatggcagaagatgaggagggatacaggaagctgatcgatcagaagaaggat
aagcggctggcgtacctgttgcagcagaccgatgagtacgtagccaacctgaccgagctg
gttcgggctcacaaggcggcccaggctctcaaagagaagaagaagaaaaagaaaaagaag
aagaagctggagaacgcagaagggcagccactcgctttgggaccagatggagagccgctg
gacgagacgagtcagatgagtgacctgcctgtgaaggtgatccacgtggacagcgggaag
atcctgagcggagtggacgctcccaaagcgggacagctggatacctggctggagatgaac
cccggctatgaggtagcgccgagatcagacagcgaggacacaggttctgatgaggacgag
gaggaagaggaagagccccaaccatcacaggctccagtggaagagaagaaaaagattcca
gatccagacagtgaggatgtttcagaagtagacgctcgtcacatcattgagcatgctaag
caggatgtagatgatgaatatggtggtgcagcgttcacatgcggcctgcagtcgtactac
tcagtcgctcacgcggtcaccgaaaaggtcgatagacagtcgtccttgttgattaacggg
cagctcaaacagtatcagattaaaggtttagagtggctggtgtctctgtacaataataat
ctgaatggaatcctagctgatgagatgggtttaggaaaaaccatccagactatcgcgctc
atcacctacctcatggagtacaaacgcctcaacggtccatatctcatcatcgtaccgctt
tcaactctttctaactgggtctacgagtttgacaaatgggccccgtctgtagtgaaggtc
tcctacaagggatctcctgcagccagacgggcgtttgttcctcaactccgcagtggaaaa
ttcaacgttcttctcaccacctatgagtacatcattaaagacaagcaaatattggcaaag
atacgctggaagtatatgatcgtggatgagggccatcggatgaagaaccatcactgtaag
ctgactcaggtgctgaacacacactacttggctccgaggcgcgtactgctgacagggacg
ccgctgcagaacaagctgcctgagctctgggcactgctcaacttcctgttgccaaccatc
ttcaagagctgcagcaccttcgaacagtggttcaacgccccctttgccatgacaggagag
aaggtggacctgaacgaagaggagaccatcctgatcattcgccgtctccacaaagtgctc
cgccccttcctgttacgtaggctgaagaaagaggtggaagctcaactacctgagaaggtg
gaatatgtgataaagtgcgatatgtcagcactgcagagggttctttacagacacatgcag
gccaaaggggttctgctgaccgacggatctgaaaaagacaagaagggtaaaggtggcact
aaaactctgatgaacactatcatgcagttgaggaagatttgtaatcatccctacatgttc
cagcagattgaggagtccttttctgagcacttggggttttctggtggtatagtacaaggc
gctgatctgtatcgagcttctggaaagtttgaagtgctggaccggatccttcccaaactc
cgagcgaccaatcacaaagtgctgctcttctgccagatgacatcactgatgaccatcatg
gaggactattttgcgtatcgcaactttaaatacctccgtctggatggtaccactaaggca
gaggatcgcggcatgctgctgaagatgtttaatgatcctgagtcacagtacttcatcttt
ttgctgagcaccagggcagggggtctcggtcttaacctgcagagtgcggacacggtggtc
atctttgacagtgactggaaccctcaccaggacctgcaggctcaggaccgggctcatcgt
atcgggcagcagaacgaggtacgggtgttgcgcttgtgcactgtgaacagtgttgaagag
aaaatcctcgctgctgccaagtacaagctcaatgtggaccagaaggtcatccaagcaggc
atgtttgaccagaaatcttccagtcacgagcgccgcgcgttcctgcaggccatcctggag
cacgaggagcaggacgaggaagaggatgaagttccagacgatgaaactgtgaatcagatg
atagcaaggagtgaagaggagtttgatcacttcatgcgtatggatttggaccggcgtcgt
gaagaggcgagaaaccccaagcgcaggcctcggctcatggaggaagacgagttgccgact
tggatcatgaaagacgatgccgaggttgagcggctcacctgtgaggaggaggcagagaag
atgtttggccgcggatcacgtcagagaaaggaagtcgactacagtgactcgctcactgag
aaacagtggctcaaggctatagaggaaggcacactggacgagatcgaggaggaagtgcgc
cacaagaagacgacccgaaagaggaaacgcgatcgggacattgacgctggtccatctaca
tcagggacacgtggagcgagagacaaagatgacgacactaaaagacagaagaagcgcggt
cgacctccagcagagaagataaccccaaacccaccaagcctcaccaagaagatgaagaag
attgtcgaagctgttattaaatacaaagagagcagtaatggccggcagctgagcgaagtc
ttcatccagctcccgtctcgtaaagagcttcctgagtattacgagctgatccgcagacct
gtcgactttcgaaagatcaaggagcgtattcgcagccaccgctatcgcagtctgaacgac
ctggagagagacgtgatgctgctgtgtcagaatgctcagacctttaacctggagggctca
ttgatttacgaggactccattgtgctgcagtcagtgttcaccagcctgcgacaaaagatc
gagaaagaagaggaaagtgacggagaggagagtgaggaagaggaggaggaacaggacgaa
ggctcggagtctgagtctcgctcagtgaaggtgaagatcaaactgggccggaaagaacgc
ggtgcagagagaggaaaaggcagaaggaggggaggaagaaccagagccaaacctgtcgtc
agtgatgatgacaccgaggacgaacgagaggaggagcgctctaacactgccagtgatgaa
gaccagggatga
DBGET
integrated database retrieval system
