Tachysurus vachellii: 132845082
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Entry
132845082 CDS
T09596
Symbol
usp40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132845082 (usp40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132845082 (usp40)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132845082 (usp40)
Peptidases and inhibitors [BR:
tvc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132845082 (usp40)
Ubiquitin system [BR:
tvc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132845082 (usp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
YukD
Motif
Other DBs
NCBI-GeneID:
132845082
NCBI-ProteinID:
XP_060725099
LinkDB
All DBs
Position
4:complement(33151467..33171813)
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AA seq
1235 aa
AA seq
DB search
MSMFGDLFEEEEEESTTNTITQSKGKVCEPPPPRGKLKLSGIRNQGSTCYLNSLLQTLLH
TPEFREELFRLGPEELGKLEDKDKPDAKVRVIPLELQNLFARLLLLDEQTTTTTALTESF
GWTNSEEMAQQDVQELNRILFSALESSLIGTSGSSLIQRLYHGTLINRITCNECLNVSER
QEDFLDLTVCVRGVSSLEEALWSMFVEEEVFEGNNLYRCSHCDQLVKATKSVKLRKLPPF
LTVSLLRFSFDFKKCERFKETRRYSFPLSINLRPYCEQSDQPDSELSYELYSVIIHKGGC
YGGHYHVYIKDIDQLGHWELPAAGAQDDDVKQMKQKDQVKPVTVSVCESAVEKDNPLSLL
ITVLAQESGSVLMDQLGQKLMEKIGCSWNKKYRKQHGPIRKFLQSNPDVFVLLANGSRVA
LRNPAETPEQGADPKCVADCVQDLLEAGSDFGLEAEPVIRHWFDLNDSMVTAISESDIIK
QYEGKESAYMLFYRKRTLYRDPHVVGNPAFGVPAHLLQMVQEENDKLQQRRAEFEISSNS
IDVRLHFASHYCAENGALKLMDPHTDTHTVTLSIDCRRTVGDLRLAVYQMQDVWKGDMAL
TIAKNLPAGLHLYDTLTDDQQSLYSAGVYNCSDLFVWNGKEVNGLCVQTGAESEPLLLNI
LRPGGPELDLVNQASEPDACGLVHVTQGFSGRATLGGVRDALSLPEALVCQQAKGMGPGG
EGGGASRWKLCSPETMRRTLRELTLQDGDTLLLLPHTPLNTSVFSVSEDVVTVMTPSDCR
WLQVEFHTAHEEEKKLMKIPAAGSTLLREVKQRALEEMQLQEHFTGGVCCLRERDRTGKF
LPPVCEDLSVRDAGIKLMTSLCLCPGYSPNTSQLFLIFCVVPPRGPEMEIIVEQTITVKE
CLMAMLQKAGLTGTCWHLRRMDWCEEVGEPLTDENASLLDMGVVNGDTLVITEGQLPPKG
FLRLPVSWFMDLSDECERNNTTELHTTELQSVGCVEISEEASLHELRCQVLTLPALIQVC
VPSPEFLRVWLVEKKKLIRILRGNQLTLRKLKLSVVSEVCVQKLQCVENLGLKDILLRLQ
VDVAKDELGVSEESVYFPTHEFVWEAGIDSSPRGLYHAVSTHCGISPENLLLAKHLPEQH
TWLTINYGIQALSKQKKKKQKQNNSKGVNLQGAPYCLRDGDTIAVKNLLIDSNREFGTLK
NEHTLREQREYRRCSEKKRNRKAEVALSINVGVFR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcggagatctatttgaagaggaagaagaagagagcacaactaacaccatc
acccagagtaaagggaaggtgtgtgagccgccacctcctcgagggaagctgaagctgagc
ggaattagaaatcagggatcaacatgttacctcaactcactcctgcagactttgttacac
acacctgagtttagagaggagttgttcaggttaggacccgaggagctcggcaagctggag
gataaagacaaacccgatgctaaggtgcgtgttattcctctggagttgcagaatctgttt
gctcgattgttattgttggatgaacaaacaacgacaactacagcgctgaccgagagcttt
ggctggaccaatagtgaggaaatggctcagcaggatgttcaggagttaaacaggattttg
ttcagtgcattagaatcatctctcattgggacgtcaggctccagtctgatacagagactt
taccatggaaccctgatcaacagaatcacctgcaacgaatgtctcaacgtcagtgagaga
caggaggactttctggacctcacagtgtgtgttcgtggtgtgagcagcctggaggaggca
ctgtggagcatgtttgtggaggaggaagtctttgagggaaataatctgtatcgctgcagc
cactgtgaccaacttgtcaaagctaccaagtctgttaaactgaggaagcttcccccattt
ctcaccgtgtctctgctgcgcttcagttttgattttaagaagtgtgagaggtttaaagag
acgagaagatacagcttcccgctcagcatcaacctgcggccgtattgtgagcagtcagac
cagccagactctgagctgtcctatgagctctactccgtcatcattcacaaaggtggatgt
tatggaggtcattaccatgtctacatcaaagacattgaccagcttggccactgggagctg
cctgctgcgggtgcacaggacgatgatgtaaaacagatgaagcagaaagaccaggtgaag
cctgtcactgtgagtgtgtgtgagtctgctgtggagaaggacaaccctctgtctctgcta
ataactgtactggcccaggagtcagggagtgtactgatggatcagcttggtcagaagtta
atggagaaaattggctgttcctggaataagaaatacaggaagcagcacggtccaataaga
aagtttctgcagtctaaccctgacgtgtttgtgttgctggcgaatggctcccgtgtggct
ctcagaaacccagcagaaacacctgagcagggtgcagacccaaaatgtgtggcagactgt
gtacaagatttgttagaggcaggatcagactttggtttggaggcggagcctgtgatcaga
cactggtttgacctgaatgactcaatggtgacggccatcagcgagagtgacatcatcaaa
cagtatgagggaaaagagagtgcatacatgctgttctacaggaaacgtacactgtacaga
gatcctcatgtggtcggtaatcctgcgtttggagttcctgctcatctgctgcagatggtg
caggaggaaaatgacaagcttcagcagaggagggcagagtttgaaatcagcagtaacagt
attgatgtccggcttcactttgcttctcattactgcgctgagaatggagcactaaagcta
atggacccccacacagacacacacaccgtcaccctgagcatcgattgcaggaggactgtg
ggagacctgagactggctgtttatcagatgcaggatgtgtggaaaggggacatggcactg
actatcgctaagaacctgccagcaggcctacacctgtacgacacgctaacagatgatcag
caatctttgtacagtgctggagtgtataattgctccgatctgtttgtttggaatgggaaa
gaggtaaatggtctgtgtgtgcaaaccggcgccgagtctgaacctttgctgttgaacatc
ctgaggccaggtgggccagagctggacctcgtgaaccaggcctcagaaccagatgcttgt
ggtctagtgcatgtaacccaggggttttcaggcagagccacactgggtggagtgagggac
gctctgagcctgccggaggctctggtgtgtcagcaggcaaaagggatgggaccaggtgga
gagggaggtggggccagcaggtggaagctgtgttcacctgagactatgaggaggacacta
agagaactcacactccaggatggagacacactgctgctgctgccacacacacccctgaac
accagtgtcttcagcgttagtgaagatgtagttactgtaatgacaccgtcagactgtcgc
tggctgcaggtggagtttcacaccgcacatgaagaagagaagaagttgatgaagattcct
gctgcaggaagcacattgctgagggaggtgaaacagagggcactggaagagatgcagctg
caggagcacttcacaggtggtgtgtgttgtttgagagagagggacagaacagggaaattt
ttacccccagtctgtgaagacctcagtgtgcgtgatgcaggcatcaagttgatgacatca
ctgtgtctgtgtcctggatactccccaaatacctcacagctcttcctgatcttctgtgtg
gtgccacctagaggcccggagatggagataattgtggagcagacaataactgtgaaggag
tgtttgatggcgatgctgcaaaaggctggactcaccggaacatgctggcatttgagaagg
atggattggtgtgaggaggttggggagcccctgacagatgaaaatgcttctttgttggac
atgggggtagttaatggagacacacttgtgatcactgagggacaacttcctccaaaggga
tttctaaggttgcctgtgagctggtttatggacctgagtgatgagtgtgagagaaataac
acaacagaattacacactacagagctgcagtctgtaggctgtgttgaaatctcagaagag
gcctcactacacgaactcaggtgtcaggtgctgacgttgcctgcactgatacaggtgtgt
gttccatctcctgaatttctacgtgtttggttggtggagaagaaaaaactgatcagaatc
ctcagaggaaaccaactcacactcaggaagttgaagttgtctgtggtatctgaggtttgt
gtgcagaaactgcagtgtgtggagaaccttgggctaaaggacatcctgctgcgtctgcag
gttgatgttgccaaagatgagttgggtgtgtctgaagagagtgtttattttcccactcat
gagtttgtgtgggaggcaggaatagattcttcccctagggggctgtaccatgcagtctcc
acccactgtggaatctcacctgagaacctgctgcttgctaaacacctgcctgaacagcac
acttggcttactatcaactacgggattcaggcattgtccaaacagaagaagaagaaacag
aaacagaataacagtaaaggtgttaacctgcagggggcgccatactgcttgagagatgga
gacactatagcagtgaagaatctactgattgacagtaatcgggagttcggtacactgaaa
aatgagcacacactaagagagcaaagagaatacagaaggtgctcagagaaaaaaaggaac
agaaaagcagaagtggccttgtcaatcaacgtgggtgtgttcagatag
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