Tachysurus vachellii: 132845453
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Entry
132845453 CDS
T09596
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
tvc
Tachysurus vachellii
Pathway
tvc04514
Cell adhesion molecule (CAM) interaction
tvc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132845453 (lrrc4bb)
04517 IgSF CAM signaling
132845453 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132845453 (lrrc4bb)
Cell adhesion molecules [BR:
tvc04515
]
Immunoglobulin superfamily
NGL family
132845453 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
Ig_6
Motif
Other DBs
NCBI-GeneID:
132845453
NCBI-ProteinID:
XP_060725408
LinkDB
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Position
5:395484..406059
Genome browser
AA seq
727 aa
AA seq
DB search
MWAAMLTGLCSPFPLIWLVQLLLWPYFSGPPLAEATPPCPAPCSCSNQASRVICTRKGLD
EVPQSISVNTRYLNLQENSIQMIKSDTFKHLSHLEILQLSKNHIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLVNLRFLNLGMCGLKDVPNLTPLVKLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSRISLIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVETGQEVHDSARQFVNETFIGYLGPT
ASSGSTGPSGSVPSSLSPHVTRAPERPFTVSITDVANLSGLEDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARTIEIINVEDEMGPAGGASGIAGGSTLHSGAGPGT
GGGPGTNLRIHDPEIITLPNIGRSDHVNHYYKSHHFNNNILGLNMGVGQTGNKTSPSSKK
QASSTNQTATSVDSTTAGSVSPPLPIPIPMTMTFHGTLKSLSHTPSSQNEPLLLSNGSKE
SVQETQI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgccatgttaacaggcctctgtagcccctttcccctcatctggttagtccag
cttttattatggccatatttcagtggacccccgctggctgaggcaactcctccatgccct
gccccctgtagctgctccaatcaggcaagtcgggtgatttgtacgagaaagggactggat
gaagtcccacaaagtatctcagtcaacacacgatacctcaacctgcaggaaaactctata
cagatgatcaaatctgacacctttaaacacctgagtcacctggagatccttcagctttca
aagaatcacattcgtcagattgaagttggggcatttaatggcctcccaaacctcatcaca
cttgagcttttcgataatcgtctgccattggtcccatcacaagcattcgaatatctcagt
aaactgcgtgaactctggctgcgaaataatccaatagaaactctcccagcctatgctttc
catcgcgtaccttctctccgacgtctggacctcggtgaactccgaaagcttagtttcatc
tcagaagcagcctttgaaggactagtaaacctccgcttcctgaatttgggaatgtgtgga
ttgaaagatgttccaaacttgacgccacttgtgaaactagaggaacttgaactttctggg
aaccagctaggtgtagtccgtccaggatcattccaaggtcttgtttcgctgcgcaagttg
tggcttatgcactcacgcatctcgctaattgaacgcaatgcttttgatgatctgaagaat
ctagaggaacttaatctttcccacaattctttgcattcactgccgcatgacctttttacc
ccactgcagcaacttgaaagggttcacctgaaccacaatccatgggtttgtaactgtgat
gttctctggctcagttggtggttgaaagagactgtaccagataactccacatgctgtgcc
cgctgccatgctccacctggcaccaaaggacgctacattggagacctggatcagagagac
ttcacttgctatgcccctgtgatcgtggagcctccaactgacctgaatgtgactgaggga
atggcagcagagctgaaatgccgaactggaacatccatgacctctgtgaactggttgacc
cctaatggaaccctgatgacccatggtgcttacaaagtacgaatctcagtgttacatgat
ggcaccctgaacttcactaatgtcaccatgcaggatactgggccatacacttgcatggtg
actaactctgctggaaacaccacggctaccgctgtcctcaatgtgtctgcctccgatcct
ggcaatggatacagttattttacaacagtcactgtggaaaccgtggaaacagggcaggaa
gttcatgactctgctcggcaatttgtcaatgagacctttatcggttatctaggcccaaca
gcatcatcaggctcaacgggaccttctggatcggtaccatcttccctgtcaccccatgtt
actcgagctccagagcgccctttcacagtctccatcactgatgttgctaatctttcagga
cttgaggatgtaatgaagacaacaaagattataattggctgctttgtagccatcactttt
atggctgctgtgatgcttgtggttttctataaactgaggaagcagcaccagctgcacaag
catcatggtcctgcccgtaccattgagatcatcaatgttgaggatgaaatggggccagca
gggggtgccagtggcattgcaggtggctctacccttcactccggggcaggcccaggaact
gggggaggacctggaacaaatcttcgaatccacgaccctgaaattatcacactgcccaac
attgggcgctcagatcatgttaatcactactacaaatcacaccactttaacaacaacatc
ctgggacttaacatgggagtgggccaaactggcaacaagacaagcccctcatctaaaaaa
caggcctcatccaccaatcagacagccacatctgtcgactcaactactgctggatctgtc
tctccaccattacctattccaatcccaatgacgatgactttccatggaacactgaagagc
ttaagccacacccccagctctcaaaatgagcctctgctgttgtccaatgggtccaaggag
agtgttcaggagacacagatataa
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