Tachysurus vachellii: 132845466
Help
Entry
132845466 CDS
T09596
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132845466 (sbno2a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132845466 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
132845466
NCBI-ProteinID:
XP_060725435
LinkDB
All DBs
Position
1:complement(5222804..5249731)
Genome browser
AA seq
1625 aa
AA seq
DB search
MPILATSVVMDTEDFLHPEGPQLESPEYIAPSPPLPSAGETQLFSSNSWPFPQQPQYNQY
SYPMQQSGRQFQVNPPSVDEFISFAEVDFPDLTSGRNGDFQPDLSCMDDLSNTSLFSSTP
ESLTEYTDPPGISIDCLSHTTSEGFASTQAFWDTPGHSQRQSPRFPGLHINPILNNQQFT
GFKLTEISQTPPEEEEEADEEETEELGHVDTYAEYKPSKSTIGISHPDFVVETSTLSSVP
PPDISYTLSIPENTIRTGQLSALQLEAIIYACQQHEVILKNDQRAGFLIGDGAGVGKGRT
IAGIILENYLKGRKRALWFSVSNDLKYDAERDLKDIDAPNIPVFALNKIKYGDTATSEGV
LFATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDL
QNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFEDFLHAIEKRGVGAMEIVA
MDMKVSGMYIARQLSFSDVRFRIEEITLDKEFKVVYNKAARLWAEALEVFTRAADMLGLV
SRKSLWGQFWSSHQRFFKYLCIAAKVRRLVELAKAEINRGKCIVIGLQSTGEARTREVLD
ENDGHLDRFVSAAEGVFQSLVQKHFPLEKPKREKTAGNKRKRKPRGRPPKFPKHCVEVGG
VIKISDGSDSDSEDMDSDSNSSPDSLQDNDDVIFVNHINGPTAKLEELKHGLLAKIAELG
KELPLNTLDELIDQFGGPEKVSEMTGRKGRVVRRLDGRVQYESRAEQGFTIDHVNIKEKE
RFMAGEKLVAIISEAASSGISLQADKRVKNKKRRVHMTLELPWSADRAIQQFGRTHRSNQ
ETAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKAL
DKITKAILRCIENKVPPPKGYPGGEARFFQEMKKGMIDVGIFCKEPRFGLNTEKDCTITK
FLNRILGLEVHQQNFLFQYFIDNFEYLIDKDKKEGKYDMGILDLAPGNDEIHEEKQEVFL
TPGNPQEGQVILYKISVDRGMPWADAVRKSETLTGEYEGFYLSHKLRGSQPCVLLAEQGR
GRNLVVYKPNIGRQAHPENLENLLQRYRKVTPEEAKDCWENQFVFSFQKCSHANWKGKCK
QVEQGQECWLGMRLRQYHMLCGALLRVWKRVADVVSDITNSSILQIVRLKTKQNSKQVGI
KIPENCVERVRSELSQMDAEVKRARQQKELKAQERAKEQSIRQELLRFEQQKLLYRHKNL
SHTAMHLANPPPYPGSHPIQAALPKSHAVDEVLDLTLSPCPSPEPKPTHANGTLSLNGVA
GLNGIFGMRRGTGEGGLKFPETFHLEELISQEQQRERRPTLQHNMAHNSIETLQTIHTLK
QHTALSVLQQNRANPGHLLTPQQNSSQFNTQLLRHNGSKPDINPLANHGIRVQQFPQRVN
SMSRPPHLLQPSQHLQQDGHQHSLMHTHARSLHTHVRENKMPVNEPAPLSLKLGPQSQQG
SLSSQSVTENSVTPQNNFGFNLDLLSHPSYSVTPQAPPSPSFSCSTPGTSSIFSSDPQPP
SLSDSISPSSLFAPLSERLPLSLSNGHCSMDAQDSHKGLDRMARGGSADRRHSVIQYNSP
DWDTT
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgcccattctcgcaacatctgtcgtcatggacacggaggacttcctgcacccagagggc
cctcagctggagagccccgaatacattgcacccagtcctccactccccagtgccggcgag
actcagctgttttcctctaactcgtggccatttccccagcagcctcagtacaaccagtac
agctatcctatgcaacaatctgggaggcagttccaggtcaaccccccatctgtggacgag
ttcatctcattcgctgaagtggatttccctgacctcacatcaggcagaaatggagacttc
caaccagacctgtcgtgtatggatgacctgtccaacacgtccctgttctcttctacccct
gagtctcttactgaatatactgaccctcctggcattagcattgattgcctgtcccacaca
accagcgagggctttgcctcaacacaagcattctgggacacacctggacatagccagaga
cagtcacccaggtttccaggtttacatatcaatcccatcttgaacaaccaacaatttaca
ggatttaagctcactgaaatcagtcagactccgccagaggaggaagaggaggcagatgag
gaagagacagaagaacttggccacgtagacacttatgctgaatacaagccgtccaaatct
actataggaatttctcatccagactttgtggtagagaccagcactctctccagtgtccct
cccccagacatcagctacacactctccatcccagaaaacactatccggactggccagctt
tctgccctgcagctcgaagcgatcatttatgcctgccagcaacatgaggttatcctgaag
aatgaccagagggcaggttttctgattggggatggagcgggtgtgggaaagggtcgcact
atagctggcatcatactggagaactacttaaaaggaaggaagcgagccctgtggttcagt
gtgtctaatgatctgaagtatgatgcagaaagagacctcaaggacatagatgccccaaat
attcctgtgtttgctttaaacaagattaagtatggagacacagctacctcagagggtgtc
ctgtttgccacatactcagcgctgatcggggagagtcaggcagggggacagcaccgcact
cgactcaaacagatattggattggtgtaaacctggctttgacggagtcattgtgtttgat
gaatgccataaagccaaaaatgcgacatctacgaagatgggcaaagctgtcctggatctg
cagaataagctgccccgcgccagggtggtgtatgctagtgccacaggtgcctctgagcca
aagaacatgatctatatgagccggttggggatttggggagagggaacacctttcaaaaca
tttgaggacttcctacatgccattgagaagaggggtgttggcgccatggagatagttgcc
atggatatgaaagtcagtggcatgtacatagcccggcagctcagcttttctgacgtgagg
tttcggatcgaggaaatcacactggataaagagttcaaggtggtctacaacaaggcggca
cgtctgtgggctgaagctctggaagtgttcaccagggctgcagatatgctgggacttgtc
tcccgtaagtccctctggggtcagttttggtcctctcaccagcgcttctttaaatacctc
tgtattgccgccaaagtgcgccgcctcgtggagctcgcaaaggctgagataaatcgtggc
aagtgcattgtgattggactacagtctactggtgaggcccgcactcgtgaggttctggat
gagaatgatggacatctagaccgattcgtctctgcagctgagggtgtgtttcagtctctg
gttcagaagcactttccattagagaaaccgaagagagaaaagacggctggaaataaaaga
aagcgaaaaccgagaggtcgtccacccaaatttccaaagcactgtgtagaggtgggtgga
gttattaagatcagcgatggttcagattcagactccgaggacatggatagtgactcaaac
tcgtcccctgattcactgcaagacaatgatgacgtcatctttgttaaccacatcaatgga
cctactgcaaaactggaggagttgaaacatggcctgctggctaagatagcagagctggga
aaggagcttcctcttaacacattggatgagcttattgatcaatttggagggccagagaaa
gtgtctgaaatgactggtcgcaagggtcgagtggtgcggaggctggatgggagggtgcag
tatgaatcacgtgctgaacaaggattcaccatcgaccacgtgaacatcaaagagaaggaa
cgctttatggctggtgaaaagttggtggcgatcatctcagaggctgcaagttcagggatt
tctctacaggcagataaacgtgtgaagaataaaaagagaagggtgcacatgacactagag
ctgccatggagtgctgaccgcgccatccagcaattcggtcggactcatcgctctaaccag
gaaacggctccagagtacatctttttgatctcagagttagcaggagagagacgcttcgct
tccattgtggccaagcgcctggagagtttgggggcactgacacatggtgatagacgagcc
actgagtccagagatctgagcaaatacaactttgaaaacaaatatggcacaaaagctttg
gataaaatcactaaagccatcctgagatgcattgaaaacaaagttcctccaccaaaaggc
tatccagggggtgaagcaagattctttcaagaaatgaagaaagggatgattgacgtgggt
attttctgtaaggagccacgctttggcctcaacacagagaaagactgcaccatcactaaa
ttcttgaatcggattctgggcctggaggtgcaccagcagaactttctcttccagtacttt
attgacaactttgaatacctgattgacaaggacaaaaaggaaggcaaatatgacatggga
atacttgatctggcgccaggtaatgatgagattcatgaagagaaacaggaagtgttcctg
actcctgggaacccccaagaaggccaggtcatcctctataagatcagcgtggatcggggg
atgccgtgggccgatgccgtgcgcaaatcagagacattaactggggaatacgaggggttc
tatctttctcacaagctacgagggagccagccgtgtgtgttgcttgctgagcaaggcagg
ggtcgtaatcttgttgtctataagcctaacatcggtaggcaggcccatcctgagaatctg
gagaatctgctgcagcgatacagaaaggtgacaccagaagaggccaaagactgctgggag
aatcagtttgtcttctcgtttcagaagtgtagccacgccaactggaaaggtaaatgtaag
caggtggagcagggtcaggagtgttggctgggcatgcgtctgcgacagtatcacatgctg
tgtggggctttgctaagagtgtggaagcgagtcgcagatgtcgtctctgacatcaccaac
tctagcatcctgcagattgtgcgcctcaaaactaaacagaacagcaagcaagttggtata
aagataccagagaactgtgtggagcgtgtgcgcagcgagctctctcagatggatgccgag
gtgaagcgagctcgccagcagaaggagctgaaagcgcaggagcgtgcaaaggaacagagc
atccgccaggagcttctcaggtttgagcagcagaaactcctctacagacacaagaacttg
agtcacactgctatgcatctagcaaaccctccaccatacccaggctcacatcctatccag
gctgccctgcccaaaagccatgctgtggatgaagtgctggacctcactctcagcccctgc
ccctcccctgagccaaaaccgactcatgcaaacggaacactgagcctgaacggagtagca
ggattgaacggcatctttggcatgcggagaggaaccggggaaggagggctgaagttcccc
gagacgtttcacctggaagagctgatctcacaggagcagcagagggagagacgaccgacc
ttacagcacaacatggcccataacagcatagaaaccctgcaaaccatccacacactgaag
cagcacacagctttgagcgtgctgcagcaaaacagggcaaacccgggacacttgctcact
ccccagcagaactctagtcagttcaacacacagcttctgagacacaatgggagcaaacca
gacattaacccactagccaaccacggcattcgtgtgcagcagtttccacagcgtgtgaac
tccatgtcacgaccacctcacttgcttcagccatctcagcatctacagcaggatggtcat
caacactcactgatgcacacacacgcacgcagtttgcatacacatgtgcgggaaaacaaa
atgccagtcaacgaacctgctcctctttctttaaaactgggtccgcagtctcagcagggg
tcacttagcagccagtctgtaaccgagaattctgtaactccacagaacaacttcggtttt
aaccttgacctcctcagtcatccttcatactcggtaacccctcaagcccctccctcaccg
tcattttcttgttccacgcccgggacttcgtcaatcttctcatcagacccccagccgcct
tcactctctgactccatctccccttcttctctgtttgcgcctttgtccgagcgactgcct
ctttcattatccaacggccactgcagcatggacgcccaggattcccacaagggcctcgat
cgaatggctcgtggaggttcagcggaccgccgccactcagtcattcagtataattctcca
gactgggacaccacctag
DBGET
integrated database retrieval system
