Tachysurus vachellii: 132845550
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Entry
132845550 CDS
T09596
Symbol
mbd3a
Name
(RefSeq) methyl-CpG-binding domain protein 3a isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132845550 (mbd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132845550 (mbd3a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
132845550 (mbd3a)
Chromatin remodeling factors
NuRD complex
132845550 (mbd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF7028
Pardaxin
Motif
Other DBs
NCBI-GeneID:
132845550
NCBI-ProteinID:
XP_060725585
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Position
1:complement(5522163..5528384)
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AA seq
279 aa
AA seq
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MERKRWECSALPNGWKREEVTRKSGLSAGKSDVYYFSPTGKKFRSKPQLARYLGNSMDLS
TFDFRTGKMIMSKLNKNRQRLRYEQSGQNRGKPDLNTSLPVRQTASIFKQPVTKVTNHPN
NKVKTDPQKAVDQPRQLFWEKKLSGLNVYDIAEELMKTMELPKGLQVSSTAGVGPGYSDK
TLLSAIASALHTSSAPITGQLSAAVEKNPGVWLNSTQPLCKAFMVTDEDIRKQEDLVYNV
RKRLEDALMADMLAQVEETSSDTKSVKEETNGSSETETV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaaaggtgggagtgctcggctctcccaaatggttggaaaagggaagaagtg
accagaaagtcgggcttgtccgcggggaaaagcgatgtctattattttagtcctacggga
aagaaatttcggagtaaaccccaactggcccgttatcttggcaactccatggacctgagc
accttcgactttcgtactggaaaaatgatcatgagtaaactgaacaaaaacagacagcgc
ttacgctatgagcaaagtggtcagaacaggggtaagcctgatttaaacacttctctaccg
gtgcgacagacagcatctatcttcaagcaacctgttacaaaagtcacaaaccatccaaac
aacaaagtgaagacggacccgcaaaaagctgtcgatcagccaagacagcttttctgggag
aagaagctaagcggactgaatgtgtatgacatagccgaagagttgatgaagaccatggag
cttcccaaaggccttcaagtgtcctccactgcaggggtcggcccaggctactcggataaa
acgctcctgtctgccatcgccagcgccctgcacaccagcagcgcccccatcacaggccag
ctatctgctgctgtggagaaaaaccccggagtctggctcaacagcacgcagcccctctgc
aaggcttttatggtgactgatgaggatatcaggaagcaggaggacctggtgtacaacgtg
aggaagcggttggaagacgcacttatggcagacatgctggcacaagtagaagaaacctcc
agtgatacgaagtcagtgaaggaggagacaaacggcagcagtgaaacagagactgtatag
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