Tachysurus vachellii: 132845567
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Entry
132845567 CDS
T09596
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03271
Virion - Rotavirus
tvc04145
Phagosome
tvc04510
Focal adhesion
tvc04512
ECM-receptor interaction
tvc04514
Cell adhesion molecules
tvc04530
Tight junction
tvc04810
Regulation of actin cytoskeleton
tvc04820
Cytoskeleton in muscle cells
tvc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
132845567 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132845567 (itgb1a)
04514 Cell adhesion molecules
132845567 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132845567 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
132845567 (itgb1a)
04530 Tight junction
132845567 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132845567 (itgb1a)
04810 Regulation of actin cytoskeleton
132845567 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132845567 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132845567 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132845567 (itgb1a)
04515 Cell adhesion molecules [BR:
tvc04515
]
132845567 (itgb1a)
04090 CD molecules [BR:
tvc04090
]
132845567 (itgb1a)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
132845567 (itgb1a)
Exosome [BR:
tvc04147
]
Exosomal proteins
Proteins found in most exosomes
132845567 (itgb1a)
Cell adhesion molecules [BR:
tvc04515
]
Integrins
Integrin beta subunits
132845567 (itgb1a)
CD molecules [BR:
tvc04090
]
Proteins
132845567 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
RBP_receptor
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
132845567
NCBI-ProteinID:
XP_060725617
LinkDB
All DBs
Position
5:8807157..8841710
Genome browser
AA seq
800 aa
AA seq
DB search
MDLKLLSISVLLGIICYSSAQPEGNECIKANAESCGDCIQVGAKCGWCTDTEFLKQGEPT
SARCDELESLKKRGCSVSMIENPQGSLKILKNKPVTHRKKGGEKLKPEDITQIQPQKLAV
SLRSGEPQTINLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMVEMSAITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGEQFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVVSVGEEGRKCSNISIG
DEVSFSINITVNGCPKQGKPQILKIRPLGFTEEVEIKLSFICDCECQKKGIANSDLCHNG
NGTFECGACRCNKDRIGRECECWKDEVSSEDLEKTCRKDNATDLCSNNGECVCGKCECKK
RDNPEEYYSGKYCECDNFNCDRSNNKLCGGHGHCECRVCVCDANYTGSACDCSLDMSTCL
ASNNQICNGRGMCECGTCRCTDPKFQGPTCEICPTCPGVCTEHKACVQCRAFGTGEKKDT
CERDCSYFTLIKVKDTDNLPQPVQAFPLMHCKERDANDCWFYYTYSVTNHTEVHVVDTLE
CPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKINAKWDMQENPI
YKSPVNKFQNPNYGQKTAAL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaccttaaactactttctatatcagtgttgttaggaatcatatgctacagtagcgcc
cagccagaggggaacgagtgcatcaaggctaatgctgaatcctgtggtgattgcatccaa
gtaggggccaagtgtgggtggtgcacagatacagagttcctgaagcagggagagcctacg
tcggcacgctgtgatgagcttgagtccttgaagaaaagaggctgttcagtgtccatgatt
gaaaaccctcaagggagcctgaaaatcctcaaaaacaaacctgtgacccaccgcaagaaa
ggaggcgagaaactcaaacccgaggacatcacccaaattcagccccagaaacttgcagtc
agcctaagatctggagagccacaaacaattaatctaaagtttaaaagggcagaggactat
cccattgacctgtactaccttatggacttgtcctactccatgaaagatgatctggaaaat
gtcaaaaacctgggcaccagcctgatggtggagatgtctgcaatcacatcagacttcaga
attggttttggttcgtttgtcgagaagacagtcatgccctacatcagcaccacccctgcc
aagcttctgaacccctgcaccggggaccagaactgcacgagtcccttcagctacaagaac
gtgctgaaactcaccagtaatggtgagcagttcaacacactggtgggtcagcagcagatc
tcaggcaatctggactctccagagggtgggtttgatgctataatgcaggtcgctgtgtgc
ggggagcacattggctggagaaacgtcactcgtttgctggtgttttctacagatgcaggt
ttccattttgccggagatggaaaactgggtggaattgtgcttcctaatgatggcaaatgt
caccttgaaaacaacatgtacaccatgagccattattatgattacccatcaatagcacat
ctggtgcagaaactaagtgaaaataacatccagaccatctttgctgtaacagaggaattt
cagcctgtttataaagaattgaaaaacctcattccaaagtctgcagtgggaacattgtcg
gcaaactccagcaacgtgatcaaccttattatcgatgcgtacaattctctgtcttcagag
gtgattctagagaacagcaagctgcctgaaggagtcaccatcacatatcaatcccgctgc
aagaacggagtagtaagtgttggagaggagggacgcaaatgctccaacatctcaattgga
gatgaggtctccttcagcataaacattacagttaatggctgccccaaacaaggcaaacct
cagatcctaaagatcagacctctgggcttcactgaggaagtggagatcaaactgagcttt
atctgtgactgtgagtgccagaagaaaggtattgcgaacagtgacctctgccataatggc
aatggcaccttcgaatgtggtgcctgcaggtgcaataaagatcgtattggccgagagtgt
gagtgctggaaagacgaagtgtccagcgaagacctggaaaagacctgccgtaaagataac
gccactgatctctgcagcaacaacggcgagtgtgtgtgcggcaaatgcgaatgtaagaag
agggacaacccagaggagtactacagcggcaagtactgcgaatgtgacaacttcaattgc
gaccgctcaaataacaagctctgtggaggtcatggccactgtgaatgcagagtctgcgtt
tgtgatgctaactacacaggaagtgcatgcgactgctccttggatatgtcgacatgtttg
gcctccaacaatcagatctgtaatggcagaggcatgtgtgaatgtggaacctgtaggtgc
actgatcctaaattccagggacccacatgtgagatctgccccacctgccctggagtctgc
actgaacacaaggcgtgtgtgcaatgccgagcttttggtacaggagaaaagaaggacact
tgtgagagagactgcagctacttcactctgattaaagtgaaagatacagataacctgcct
cagcctgtacaagccttcccactcatgcactgcaaggaaagagatgctaatgactgctgg
ttctactacacctactccgtcacgaaccacaccgaggtccatgtcgtcgatactttagaa
tgcccagctggtcctgatatcatccccatcgtggctggagtggttgcaggaattgtgctg
attggactagcccttctgttaatctggaaattgctcatgatcattcacgaccgccgcgag
tttgccaagtttgagaaagagaaaattaatgccaaatgggatatgcaagagaatccaatt
tacaagagtcccgttaataagttccagaatccaaactatggacaaaaaactgcagctctt
taa
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