Tachysurus vachellii: 132845611
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Entry
132845611 CDS
T09596
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
tvc
Tachysurus vachellii
Pathway
tvc04510
Focal adhesion
tvc04512
ECM-receptor interaction
tvc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132845611 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132845611 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132845611 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
132845611
NCBI-ProteinID:
XP_060725697
LinkDB
All DBs
Position
5:11308625..11349133
Genome browser
AA seq
3094 aa
AA seq
DB search
MRFILALVLLCASSVYCQQRGLFPAILNLASNAEISTNATCGDPVPEMYCKLVEHVPGRR
IRNPQCRICDANSTNSKEQHPITYAIDGTNQWWQSPSIKNGRQFHWVTITLDLRQVFQVA
YIIIKAANSPRPGNWILERSLDGVQYHPWQYYAISDTECLTRYNVTPRLGPPTYKRDNEV
ICTSYYSRLVPLEHGEIHTSLINGRPGADDLTPELLGFTSARFIRLRLQRIRTLNADLMT
LSYKDPKDVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDPVTKKLQCMCEHNTCGES
CNECCPGYHQELWQPGTISEGNTCEKCNCHDKAEDCYYNQTVADLKMSMNSHGQFVGGGV
CINCTQNTAGVNCETCTDGYYRPHKVSPYADEPCVECNCDMRGSLSRVCVKDDNQANPGK
GVFPGQCVCKNGFAGEKCDRCAFGYRDFPSCTRCECSLEGSLNIDPCRECICKVNVMGAN
CDLCKQGFYNLQSSNPEGCTECFCFGVSDVCESSTWSSSMIVHRDGWLRPSTRSTSVYTA
PIIEDNLIIANNATAARSYQTVSAWTAPEPFLGNKLTAYGNLLNFSVAYDVSVDNNVDKT
LPSHFDVIIEGNGKTLLQLLPRRVFLNPHREQQVALELLPHVFMDVHTERRVQRDELMSV
LADVASFRIRAHLNTTVDGVLRLSTVYMVVADPTSTSSKISPDVEQCECPWGYSGTSCET
CISGFYRVGGILFGGNCLQCECNDHASECDINGVCLDCSHNTTGPHCNQCLPGYYGDPTE
GTEEDCQRCACPLTLASNNFSPTCSLRGPGGVTCDQCERGYTGAKCERCANGFYGNPTIP
GQKCSVCECNGNVDPSEPGYCDAITGECLKCVRHTAGRHCERCEDGYYGDAIIAKNCRAC
GCHANSSVSTVCNIITGQCECKANVEGDKCDRCQVGYFGINSGDGCRECKCNQSGSVSEA
CDEAGQCQCTVGVAGDKCDRCLHGYYNFTDDGCTPCNCDHTHGNCNAETGECICPPNTRG
EKCEICDDDHWGHDGVTGCKSCGCDAAGSNSSQCDLLSGQCMCRPHFTSQKCNRCTLGFR
NFPECTACNCNADGTHEEFCDAELGVCGCEDDGQCMCKENVGGGGCDECKSGTFGLWRQN
PAGCSPCFCFGVSSICEELGGLVRVPITAGLTTERLHVVSQSDLQGTLEGVYYIAGEILL
DVAQLQTGSTLTGPYYWRLPQPFQSSKLLSYGGELSYTVTFAAMDGSGLSNYEPQVLMRG
GHLRKLVIYIDMPAPENGVRTTQRVPLTEHKWKYFNAVSENAVSHEDFMSILSNVEYIII
KASFGTGLQQSRISNISMETAVDVDESPEGMEVARLVEICECPPGYAGLSCQECAPGYYR
QRVSELNMKGMNRPMIQPCVPCQCNNHSLACDLDTGECLGCQHHTAGEHCNICAPGYYGQ
VKGSISDCSLCACPIQSNSFSPTCVLDGVGDYHCNACKPGYEGRYCERCSLGYYGNPSQP
SGKCEECVCGTSGSLHNLCDAQTGRCECKLGFRGHLCDQCEDRHVLTDDQCVSCDDECTG
VLLDDVDAIEASIRSLNLSGVILAPYTLLISLENQTQELQTKMSSEQNSSYQLKGREEDT
THLTKQVDQLQQKAMNISAFGDNVLRATEESVNHGKGLLDQISNVYTAIQVVKEDVSNLN
ETVKEEMEEGRSAVLLEQMEAILENIRAVDLVSSNSTALEELSAAVVNLDSVQKEIMEPF
NQTENLKHNISTNLARHHQHLQYAQELLNTAKNHTNHTEHLLMNIHTNLEEYKVNVTITR
HNVSSLNQSVEANLEEAQEFLTDALHIAEDMRNLTAKVEEAKEELLQWSPTVRKHVDTLV
MELTKRDALQLVYSAEDHAQALRTEAQTINSTLSGVREASLNATTTSRGISDISDNIQQA
ENVALSVSQNANYTLNLILHSNESLTELGKQAVQRSLKILNESADLNKYIEGLALNASAV
TSKLSVIRTSVHNISQLLPEALINLNNLPSGNREQILKAKQQAANANASLQKALEHLEDY
HIKLEASSSAVRSANSSAGTVNVMVKDSEDTASAVESKIKEAQSRTERLFDRLQPLKLLG
ENLSRNLSEIKEMINQARKQAASIKVAVSADMSCVRSYKPEITSSNFNTLTLTVKTTEPD
NLLFYMGSSTSVDFMALEMRHGKVAFLWDSGSGHTKLEFPNLQINNNKWHRINATRFGRQ
GSLTIQQLDSEPMPPVKTTAPGSSTVMEVNKSTWVFVGGLGGQVKKSSAVKMTHFTGCIG
EASLNEKNIGLWNYAEREGSCGGCFMRPETEETSFHFDGSGYSVVVKNLRPTSTSIVMFF
KTLSPNGLLLYLASNGTRDLLSIELVEGKVHLTFELGSGPLTLTSTKVYNTGVWYKIALN
RNKRKGYLSIMTADSPSEREIMEAESPGTASDLNRSDLDPIYIGGLPASRPIRRQVVARS
YVGCIKNVEIARTNFDLLREAYSVKKGCILKSIRSVSVLGGGYVQMPEVTVGPHSELMSS
FSSRNSSGLILAGFSSASAHKRRHTQQPFLAVMLVSGRVEVHMSMAEGGGTYKAVVKSQN
GTFSDGQEHSLILQRNKRTLTVYVDEDQQETVKLGLPSEKVLTLSNFYIGGVPPGEATGT
LFSTTSFYGCIRNMAVDTMLLDLSGAIKYEGVDMDSCLLEERPKRLLLPDEGDVEPEPTA
GPDQRPLSPPSEHSAVTPGATTCAASDNTESIPDAHQLGFSKNSYMMFSFKNKTVRSSFT
VELSIRTLAHSGILYYMANANQQDYAVLQLLGGRLLFSCDLGKGPAMTTSLTNINDGQWH
TVRTDFSKKSILISVDGAESERTTIKGQSLDVEGKLYVGGLPAGYTAKRIGNVTHSVASC
VLKVKLNNAELNLNNAAASYDTGSCFSAVQDGTFFNGSGYAAFMKEGYYVGSDVTVSLEF
RSTSLDGVLLGVSSARVDAIGLELVDGQVVFNVNNGAGRFSAVSRSRSWLCDGRWHTLVA
KKLKHSLSLTVDGVTVSAENPHSSSTSAETKNPIYIGGYPANVKQSCLSTRTSFRGCMRN
LRLSRGHIIDVLEFSSAFTRPGVSPHSCPAAAAA
NT seq
9285 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcatcctggcgctcgtgctcctctgtgcatcctcagtatactgccagcaaaga
ggtctctttcctgccattctgaacttggccagcaatgctgaaatatccaccaatgccaca
tgtggggaccctgttcccgagatgtactgtaagctagtggagcatgtccctggaagacgc
atacgaaacccgcagtgcaggatatgtgatgctaacagcacaaactctaaagaacaacac
cctatcacttatgctattgatggcaccaatcagtggtggcagagtcccagcatcaagaat
ggccgtcagttccactgggtcaccatcacgctggatttacgacaggtcttccaggttgct
tacatcatcatcaaggcagcaaactctcctcggccagggaactggattctggagaggtct
ctggatggtgtccagtaccatccatggcagtattatgccatcagtgatacggagtgtcta
actcgttataatgtcaccccgcgtcttgggcctcctacctacaagagagataatgaggtc
atctgtacctcctactactcccgactggtgcctctggaacatggagagatccacacgtct
ctgataaacgggcgtccaggcgctgacgacctgactccggagctactggggttcacctct
gcccgatttatccgtctgcgtctgcaacgaatccgcacactcaacgccgacctcatgaca
ctaagctacaaggaccccaaggacgtggatcccatcgtcacccgccggtattactactca
atcaaggacatttcagtgggtgggatgtgtatctgctatggccacgcccagagctgtccc
ttggaccctgttaccaagaaactgcagtgtatgtgtgagcacaacacttgtggcgagagc
tgtaatgagtgttgtcccggctaccaccaggaactgtggcaaccagggaccatctctgaa
ggcaacacatgcgagaaatgcaactgtcacgacaaagcagaggactgttattacaaccag
acggtggccgatctgaagatgagcatgaactcacatggccagtttgtaggaggtggtgtg
tgtatcaactgcacgcaaaacactgcaggagttaactgtgaaacttgcactgatggttac
tacagaccacacaaggtgtctccatatgctgacgagccttgtgtggagtgtaactgcgat
atgaggggctcactcagccgtgtctgcgttaaagacgacaaccaggcaaatcctggaaaa
ggtgtttttccaggtcagtgtgtgtgtaaaaacgggtttgcaggtgagaagtgtgatcgc
tgtgcgttcggctacagggacttcccctcgtgcacaaggtgcgagtgcagccttgaagga
agccttaacatcgacccctgtagagagtgtatctgtaaggtcaatgtgatgggggcaaat
tgtgacctgtgtaagcagggcttctacaacctacagtccagtaacccagagggatgcact
gaatgtttctgtttcggtgtctctgatgtgtgtgaaagctccacctggtccagctctatg
attgtacacagagatggttggctccgtccctcgactcgcagcacctcagtctacacagcc
cctatcatagaggacaacctcatcatcgctaataacgctaccgctgctaggagctaccaa
actgtatctgcctggactgccccagaacccttcctcggcaacaagctgactgcatatgga
aaccttctgaacttcagcgtggcatatgatgtatcagttgacaataatgtggacaaaact
cttccatcacattttgatgtgattattgagggaaatgggaagacgctgctccagcttctc
cccaggcgtgtatttctgaatcctcacagagagcagcaggtggccctggaactcctgcct
catgttttcatggacgtacacacagagcgaagggtgcagagagacgagctgatgagcgta
cttgctgacgtggccagtttcaggatcagagctcacctcaacaccactgtggatggagtg
ctaagattgagcactgtgtacatggtcgtagctgatcccacttccacaagctctaaaata
tctccagatgtggagcagtgtgagtgtccttggggatactccgggacatcctgtgagacc
tgcatttctggcttttatcgagttggaggcatcctgttcggaggcaactgtctgcagtgt
gaatgtaatgatcatgcctctgagtgtgatattaatggagtgtgtctggactgctctcac
aacactacaggaccacactgtaaccagtgcctgccaggttactatggtgacccaacggaa
ggcactgaggaagactgtcaacgatgcgcctgcccgctgacactggcgtccaacaacttt
agtcctacttgttctctgcgaggtcctggaggggtcacatgtgaccagtgtgagcgagga
tacacaggagccaagtgtgagaggtgtgctaacggattttatggcaacccaaccatccct
ggtcagaaatgctcagtgtgtgagtgtaacgggaacgtggacccgtctgaaccaggctac
tgtgacgctataactggcgaatgtttaaagtgtgtgagacacacagcaggcagacactgt
gaacgctgcgaggatggttactatggagatgctattatagctaagaactgccgagcctgt
ggctgccatgctaacagctcagtttccactgtgtgtaacattataacgggtcagtgtgag
tgtaaagccaatgtggagggagacaagtgtgaccgctgtcaggtcggttactttggcatc
aacagtggcgatggttgcagggagtgcaaatgtaatcagtcaggatcagtatcagaagca
tgtgatgaagccggtcagtgccagtgtactgttggtgtagctggtgataaatgtgaccgc
tgcctgcacggctactacaatttcacagacgacggctgcacaccttgcaactgtgatcac
acacatggtaactgcaatgctgagacaggagagtgtatctgcccaccaaacaccagagga
gagaaatgtgaaatatgtgacgacgatcactggggacatgatggagtgactggatgcaag
tcatgtggatgcgatgccgccggctcaaactcgtctcagtgtgacctgctcagcggtcag
tgcatgtgcaggccacacttcacttctcagaaatgtaaccgttgcactctaggcttcaga
aatttcccagagtgcactgcatgcaactgcaacgctgacggcacccatgaggagttttgt
gatgcagaactgggagtgtgtggatgtgaggatgacggacagtgtatgtgcaaggagaac
gtaggtggtggtggatgtgatgaatgtaaaagtgggacatttggtctgtggaggcagaat
ccagctggatgcagcccctgcttctgttttggggtctcctccatctgtgaggagcttggt
gggctggtcagagtgccaataacagcagggcttacgactgagcgtctacacgtagtgagc
caaagtgacctgcaagggacactagagggagtttattacatagcaggagaaattctgctg
gatgtggctcagctccagactggttcaactctgactggaccttattactggcgattgccc
caaccttttcagagcagcaagctgctgtcctatggtggtgaactctcatatactgtaacc
tttgctgcaatggatggatcaggtctatccaattatgagcctcaagtgctgatgagggga
ggacatctgaggaagctggtgatttacattgacatgcctgctccagagaacggcgtccgc
accacacagcgtgtccctctcacagagcacaagtggaagtacttcaatgcagtgtctgag
aacgctgtgagtcacgaagacttcatgtccatcttgagtaatgtggagtacatcatcatc
aaagcctcattcgggacaggactccagcaaagcaggatctcaaatatctccatggagaca
gcagtggatgtggacgaatctcctgagggaatggaggtggccaggctggtggagatatgt
gaatgccctccaggctatgcaggcctgtcctgtcaggaatgtgctccaggttactatagg
cagcgagtatcggagctcaatatgaagggcatgaatagacctatgattcagccttgtgtc
ccctgccagtgtaataaccacagcttggcatgtgacctagacacaggcgagtgcctgggc
tgtcagcaccacacagcaggagaacactgtaatatatgtgccccggggtattatggccag
gtgaagggatccatcagtgactgctcactttgtgcttgtccaatacaaagcaacagtttt
agcccaacatgtgtattggatggtgttggtgattaccactgtaatgcctgtaaaccaggc
tatgagggacgctactgtgagaggtgttcactgggttactatggtaacccctcacaaccc
agtgggaagtgtgaggagtgtgtgtgcggcacgagcggctcactgcacaacctttgtgac
gcacaaaccgggaggtgcgagtgcaaacttgggttcaggggtcatctatgtgaccagtgt
gaagaccgacatgtcctcactgatgatcagtgtgtgtcatgcgatgatgaatgcactggg
gtgctgctggatgatgtagatgctatagaagcctcaatacggtctctgaacctcagtggt
gtcattctggccccatacaccctgttgatcagcctggagaaccagacccaagagcttcaa
accaagatgtcatcagagcagaactcaagctatcagttgaaagggagagaggaagataca
acacatctcactaaacaagtggatcagctacaacaaaaggctatgaacatatctgctttt
ggcgacaatgttttgcgggctaccgaagagagcgttaatcacggaaaaggtcttcttgac
cagatttctaacgtttatactgccatccaagttgtgaaggaggatgtgagcaatcttaac
gagacagtgaaagaggagatggaggaaggacgcagtgctgttctgctggagcagatggag
gccattttggagaatattagggctgtcgatttagtcagcagcaacagcactgctttagaa
gaactcagtgctgcagtggtgaaccttgacagcgtgcaaaaggaaataatggaacccttt
aatcaaacggagaatctgaagcacaacatctccactaacctagctaggcatcaccagcat
ctccagtatgcacaggagctcctgaacacagccaagaatcacactaatcacacagaacat
cttctgatgaatatccacaccaatctggaagagtacaaggtgaatgttactataacaagg
cataacgtgagcagtctgaatcagtctgtggaggcaaatctggaggaagctcaggaattt
ttgactgatgcacttcatatcgccgaagacatgcgcaatctcacagcgaaggtggaggag
gctaaggaggagctgctgcagtggagccccactgtgaggaaacatgtggacactctagtg
atggagctaaccaaaagagatgctctacagttagtgtacagtgcggaggaccatgcccaa
gcactcaggacagaggcacagacaatcaacagtactttgtctggagttagagaagcatcg
ctgaatgccaccaccacttcccgaggaatctctgacatcagcgacaacatccagcaggct
gaaaacgtggcactgtccgtcagtcagaatgctaattacacccttaacctgattctacat
tcaaacgaatccttaactgaactggggaaacaggctgtgcagagaagcttaaagatttta
aatgaaagtgcagatttgaataaatacattgaagggcttgcgctgaatgccagtgctgta
actagcaagctcagtgtaatcagaacgagtgtgcacaacatctcccagctgctccctgag
gctctcatcaacctgaacaacctgcccagtggaaatagggagcagatccttaaagcaaag
cagcaagcagccaacgccaatgcctcattacagaaagctctagagcatttggaggactac
cacataaagctagaggcatcatcttcagctgtgagatcagccaacagcagcgccggcact
gttaacgtgatggttaaagactctgaggacactgccagtgcagttgaatctaagataaaa
gaggctcagtcgcggacagagagactctttgacaggttacaacctctgaagttgctgggg
gagaacttgagcaggaacctgtcagagataaaggagatgatcaatcaggcccgaaagcaa
gcagcctcgatcaaagttgctgtgtcagcagatatgagctgtgtgcgttcatacaaacct
gaaatcacctccagcaatttcaacacactcacccttaccgtgaaaacgacagaaccagac
aacctgctcttctacatgggcagcagcacaagtgtggatttcatggctcttgagatgagg
catggaaaagtggcctttctgtgggattcaggctcaggccacactaaactggagttccct
aacctgcagataaacaacaacaaatggcacagaattaatgccactcgattcggaaggcaa
ggctccctcaccattcagcagttggactcagagccgatgcccccggtcaagacaacggcg
ccaggttcatccacagtcatggaagtcaacaaatccacatgggtgtttgtgggagggctg
ggtggacaggttaagaaatcttcagcagtgaagatgactcactttacaggatgtattggt
gaagcatctctgaatgagaagaacatcgggctctggaattacgctgaaagggaagggagc
tgtggtggttgctttatgaggccggagacagaggagacctcttttcactttgatggcagt
ggatattcggtggtagtgaaaaatctgcgtcccacatccacaagcatcgttatgttcttc
aaaactctttctcctaacggcctgcttctctacctggcttccaacggcactagagacctc
ttgtccattgaattggtagaaggtaaagtgcacctgacctttgaactgggctctggacct
ctcacattgacctccacaaaagtgtacaatacaggagtatggtacaagattgccctgaat
cgcaacaaacgcaaaggttatttatccataatgaccgcagactccccatcagagagagag
atcatggaggcagagtctcctggaactgcctctgacctcaaccgatcagatctagaccct
atctacattggtgggctgcctgcatccaggccaatcaggaggcaggttgttgcacgctca
tatgtgggctgtatcaagaatgttgaaattgcacgcacaaactttgacctcctgagagaa
gcctacagcgtaaagaaaggctgcattctaaagtctatccgcagcgtgtctgtgctgggt
gggggatacgtgcagatgcctgaagtcactgttggtcctcatagcgagctcatgagcagc
ttctctagcagaaacagcagtggtcttatcctggcaggcttcagctcagccagtgcccac
aaacgcagacacacacagcagccgttcctggctgtgatgctggtgtcaggcagagtagaa
gtccacatgagcatggcggagggaggaggaacgtacaaagctgttgtcaaatcccaaaat
ggcacattcagtgatggacaggagcactccctcatcctgcagaggaacaaaaggacattg
acagtgtatgttgatgaggaccagcaggaaacagtaaagcttgggttaccttcagagaaa
gttcttactctgagtaatttctacatcggaggcgttcctccaggagaggccactggaacg
ctcttctccaccacatcgttctatggctgcatcaggaacatggctgtggacaccatgttg
ttggacctgtcaggagcaataaagtatgagggagtagacatggacagctgcctgctggag
gagcgtccaaaacgcctgcttcttccagacgagggtgacgtggagcctgagcccactgct
ggcccggaccaaagacccctgtcacctcccagtgaacatagtgctgttacaccaggagcc
actacttgcgctgccagtgacaacacagaaagtatcccagatgcacatcagcttggattc
tccaaaaacagttacatgatgttcagcttcaagaataaaacagtcaggtcgagttttaca
gtcgagctgtcgatccgtacgctggcacacagtgggatcctgtactacatggctaatgct
aatcagcaggattacgcagtactgcagctgctgggaggtcggctgctgttctcttgtgac
ctgggcaaaggacctgccatgaccacatcactcacaaacatcaacgatggacagtggcac
actgtgaggaccgacttcagcaagaaaagcatactgatcagtgtcgatggagccgagtcg
gagcgaacaaccattaaaggccagagtctggatgtagaagggaagctctacgtgggtgga
ttgccagcaggatatacagccaagaggatcggaaacgtgacccacagtgtagccagctgt
gtgctgaaggtcaagttgaacaacgctgaactgaacttgaacaacgcagctgcatcttac
gataccggctcatgtttcagcgcggtgcaggacggcaccttcttcaacggctcgggatac
gccgctttcatgaaagagggttattatgtgggctctgatgtgaccgtgagtttggagttt
cgttccacgtcactggatggggttctgctgggagtgagcagtgccagagtggacgccatc
ggactggagctcgtcgatggacaggtggtgttcaatgtgaataacggtgctggaagattc
tcagctgtgtccagaagcaggtcatggctgtgtgacggccgctggcacactctggtggcc
aagaagttaaagcacagcctgagtctgaccgtagacggtgtgaccgtgagcgcagagaac
ccacactcttcctctacctcagccgagacgaagaaccctatctacattggaggatatccg
gctaacgtgaagcagagctgtctgagcaccagaacatctttccggggctgtatgaggaac
ctgcgcctctccagaggtcatattatagacgtgttagagttcagctcagccttcactcgg
cctggcgtctctcctcactcctgtcctgctgctgctgctgcctga
DBGET
integrated database retrieval system
