Tachysurus vachellii: 132845719
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Entry
132845719 CDS
T09596
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132845719 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132845719 (arid1aa)
03021 Transcription machinery [BR:
tvc03021
]
132845719 (arid1aa)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132845719 (arid1aa)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Helix-turn-helix
ARID
132845719 (arid1aa)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132845719 (arid1aa)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132845719 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
132845719
NCBI-ProteinID:
XP_060725900
LinkDB
All DBs
Position
5:14776214..14799651
Genome browser
AA seq
2257 aa
AA seq
DB search
MAAQVASATSLNSSPPSELKKADRDPKEESVPVEKQQENKEPGSEIGSPGRGELHERPEP
GNATGGGGGGESEMKNGNGNPPRLTNNQNDPAGPEANNHPGMAHQHHGSGFPPPSYGYTH
HYARGPFHQHGGQQSPGMAAAAPSNIMEPYGPNSHDHGFPNHQFNSYGQFPNRAPYTSSG
YAMNSPRSAPAQAAKQQQQQQQPAGGSPTMAASYNNQRYNIANPQATSTPTLNQLLTSPS
SSRGYGNYPPSDYNNQEGANKGAADISAAAAQYGGGHPGWQQRSHHPPPMSPGSTGQTLG
RTQTPSSIDQLGKMRGQPYGTGSPYSQQPHQGPPGGQQGPAYPGQGYGPPGPQRYPMAMQ
GRMQYGQQMAYGQQGPGGYGQQGQQPYYSQQGPGTHPGQQQSPYPHPPQPSAPHGQGGHP
YPQPHMPQQSQGPLGAPPPGPTQSQPPYSQPPTPQTTQSPYPQQQTPQPQPPPQGASQAP
PASQAQSNYTLSQGTQQPPTQQTPQAPTPATQQPTVQGPSSYSQNPSQQQSSYQRFPPPP
QEISQESFSSQSSATASSQPVASTKSSSEDMQGRPSSLPDLSGSIDDLPTGTESALSPGV
STSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASATASRSGPLSPAALPG
AQMPPRPPSGQSDGILHPGMNQPGMGQDRGFMQRNQMPPYGSPQSGSALSPRQSSGGQMH
SGMGPFQQNNSLGTYGPQGGQYGPQGYQRQPGYGAMPNANYPGPGMAGSMNAMSGQGGGP
PFTGMPPSRMPHGQMGGRPYGPNMGPNMGPNMGPNMGNMPPQVGSAMCPPPGLNRKPQEA
AAAMQHGSTNSIHNRMPGYPNMSPGMMGSGPPYGPSMNNMPGMINTQGPPFPMSGNMPNN
SSGMSPGPEFAMDGKLNQTQKINNKAEGTPKSESKSKKSSSSTTTNEKITRLYELGSEPE
RKMWVDRYLSFTEEKAMGMNNLPAVGRRPLDLFRLYMSVKEIGGLTQVNKNKKWRELATS
LNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIMSADTKKNQAKVQPPSPAGSGS
LQGPQTPQSTSSSMAESGDLKPPTPASTPHSQMPSMQSGRSSVNLQDPFADGNDPAFSRR
NTLTPNSGYQSGMSTPEMPGRIGPYEPNKDPFSGMRKVGEPFMSGGQGPNSNIGEQFNRG
PGGPIGNMPMGQRQQYPYGTGYERRPESGMGPENNMGPGVPQPNMMPSNTDTGMYSPNRY
PSQQQRHDSYGNQYPGPGAPPGGSYPNQQPGMFPQQQTNYKRPGEGGYPPAKRHHDGEMY
GGPFGGQQPQQQPQAPPNAPTSAQPEMYNQFGSSYPGPERRPPGPQNQFPFPFGRDRMQP
GSGPNSQGSMPPQMMSSSMQSGPDGPQAGMWQGRGEMGFPNYPNRQGPLGGPTQGPGYHG
MNRSEEMLSSEQRMNHEGPWPGQRQPAYSPAGAGPPMSRPLQSNYQSPQAMQNHIPQVSS
PTPMPRPMESRTSPSKSPYIHSNIKMQKAGPPVPASHIIPSSVQPPMMRRDPPFPPGSVE
ATQPVLKTRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISNFNLI
QLPGFLELIVEYFRRCLIEIFGILREYEVGDPGQRTLLDPNALKEVENGEDEEEPVVMGM
EEDGESEEEGEGEENSSQQRVERVSAVEPQIKTEKKVGESKKDEEGKVMESILPAEPKTT
EAPSLDLCVTQERPKQASKFDKLPLKVVKKKDPFVVDCSGKLGRLQEFDSGLVHWSIGGG
DTTEHIQTHFESKNDLLQSRIRTPSTQTCRRKKASEMIESEPPVVPSCSAERMKEEEQTQ
PQQSSTRQLNDSITEDEEEKPANVPESSLESILQKVEEEPEGSNQEASKPVLPSISSSSQ
SQRSVTVLEDEPHSKDEAPLITLSDWQDSLARRCVCVSNIVRSLSFVPGNDLEMSKHPGL
LLLLGRLVLLHHRHPERKQAPLTYEKEEEADKDIGQKEEWWWDCLELLRENCLVTLANIS
GQLDFSIYSESICLPLLDGLLHWAVCPSAEAQDPFPSLGLNAALSPQRLVLETLSKLSIQ
DNNVDLILATPPFSRLEKLFGNLVRLVGDRKVAVCREMAVVLLANLAQGDSLAARAIAVQ
KGSIGNLLGFLEDSLAATQFQQSQGSLLHMQGAHFEPTSVDMMRRAARALHALAKVEENH
SEFTLYESRLLDLSVSPLMNSSVSHVICDVLFLIGQS
NT seq
6774 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacagcagcccgccttccgagctgaaa
aaagcggaccgagacccaaaggaggagtcggtaccggtggagaagcagcaggaaaataag
gagccgggatcggagatcggatcaccgggccgcggcgagctgcacgagcggcccgagcct
ggcaatgctacgggaggaggtggaggaggggagtccgagatgaagaacggcaacggcaat
cctccgagactcaccaataatcaaaatgatcccgccggacccgaagcgaataaccacccg
ggcatggcccatcaacaccacgggtccggttttccgccgccgtcctacggctacactcac
cactacgcacggggcccttttcatcaacatggcggacaacaaagccctggcatggcagcc
gcggcgcccagcaacataatggagccgtatggaccgaactcgcacgaccacggctttccg
aaccatcagtttaacagctacggacaatttccgaaccgagcgccgtacacgagctcgggc
tacgccatgaactccccgcgcagcgctccggctcaggcggctaaacagcagcagcagcag
cagcagccagcaggaggatctccgactatggccgcgtcctacaataatcagcgctataat
attgcaaatccacaggccacgtccacaccgactctaaatcagctcctaacatcgccgagc
tccagtcgcggatacggcaattacccgccgagcgactacaacaaccaggaaggcgctaac
aagggagccgcggatatcagcgctgctgctgcccagtatggagggggccatccgggctgg
caacaaaggagccatcacccgccacccatgagcccgggaagcaccggtcaaaccctcggt
agaacccagactccgagctctatagatcagctggggaagatgcgtggccagccgtatgga
acgggcagcccatactcccagcagccccaccaaggacctccaggaggccagcagggtcct
gcatatccaggccagggttatgggcctcctggccctcagagataccccatggccatgcag
ggtcgcatgcagtatggccaacagatggcatacggacagcagggaccaggtggttatgga
cagcaggggcagcagccttattacagtcagcagggcccgggcactcacccgggtcaacaa
cagtcaccatatcctcaccctccccaaccatctgcccctcacgggcaaggtggccatcca
tacccacagccccacatgcctcagcagtcccaggggccactgggagcacccccaccaggg
ccaacccaatcccaacctccctactctcagccccctacaccacagactactcagtcgcca
taccctcagcagcagactccccagccccagcctcctccgcagggagcctcgcaagctcct
ccagcatcacaggctcagtccaactatactctcagccaaggaacccaacaaccaccaaca
caacagaccccacaagctcctacgccagccacacagcagcccacagtgcaggggccatcc
tcatactcccagaatccttcacagcagcagtcgtcttatcagcgttttcctcctcctcct
caggagatttcccaggaatccttcagctcacagtccagtgctactgcctccagtcagcct
gtggcctccactaagagctcctctgaggacatgcagggacgaccctccagtctacctgat
ctgtcaggttctattgatgacctgcccactggtacagaaagtgcgctcagtcccggtgtt
agtacatctggagtgtctagcagtcagggcgagcagagcaacccagcacagtctccgttt
tcgcctcacacttcccctcatctaccaggcatccgtggcccttcaccctcccctgttggc
tcacctgctagtgccacagcgtctcgctctggacccctctctccagcagctctgccagga
gcccagatgccgcctcggccccctagtggtcagtctgatggtattttacaccctggcatg
aatcagcctggcatgggccaggacagagggttcatgcaaaggaatcaaatgccaccatac
ggttctccccagtctggctctgcattgtcacctcgccagtcgtctggaggtcagatgcat
agtggaatgggaccttttcagcagaataactcattgggaacctatggacctcagggtggc
caatatggcccacaaggttatcaaaggcaaccaggctatggtgccatgcccaatgccaac
tacccaggccctggcatggcgggttctatgaatgctatgtctgggcaaggaggtggacca
ccatttactggaatgccacctagtaggatgccacatggacagatgggtgggcgtccttat
ggtcctaatatggggcccaatatgggtcctaacatggggcccaatatgggcaatatgccc
ccacaggttggttctgcgatgtgccctccaccaggcctcaacaggaagcctcaagaagca
gcagctgctatgcagcatggatctactaattcaatacacaacaggatgcctggttacccc
aacatgtctccaggtatgatgggctcaggacctccatatgggccctccatgaacaatatg
ccaggaatgataaacacccagggacctcccttccctatgagtggaaacatgccaaacaac
agcagcggtatgtctcctggtccagaatttgcaatggatgggaaactcaaccagacacag
aagattaataacaaagctgaagggacacccaagtcagagtccaaatccaagaagtcaagc
tcttccacaacaaccaatgagaagatcactcgtctgtatgagcttggttctgagcctgaa
aggaagatgtgggtggaccgttacctatcattcactgaggaaaaggcaatgggcatgaac
aacctgcctgctgtgggccgcaggcccctcgatctcttccgcctctacatgtctgttaag
gaaattggaggtctcacacaggtcaacaagaataaaaagtggcgagaacttgccacgagt
ctgaatgttggcacatccagcagtgcagctagctcgctaaagaagcagtacatccagtgt
ctgtatgcttttgaatgcaagatcgagcgtggagaagatccaccacctgacatcatgtct
gcagataccaagaagaaccaagctaaggtccaaccaccctccccagctggatctggttcc
ctgcagggacctcagacccctcagtccacaagcagctctatggctgagagtggggatttg
aagccccctactcctgcttctaccccacatagccagatgccctcaatgcaaagtggcagg
agcagtgtgaaccttcaggatccatttgctgatggtaatgacccagccttctctaggaga
aacaccctgactcccaactcgggctaccagtctggcatgagcactccagagatgcctggc
cggattggcccttatgagcccaacaaggacccatttagcggcatgcgtaaagtcggggag
cctttcatgtctggtggacagggtcctaatagcaacattggtgagcagtttaaccgtgga
ccaggaggtccaattgggaatatgcccatggggcaaaggcagcagtatccttatggaaca
ggctatgagagaagaccagaatcagggatgggcccagaaaacaatatgggacctggagta
ccacagccaaacatgatgccttccaacacggacactgggatgtactcaccgaatcgctac
ccatcgcagcaacagcggcacgattcctatggtaatcagtatcctggcccgggtgcgcct
cctggtggctcgtacccaaatcagcaaccaggaatgtttccacagcaacagactaactat
aagagaccaggggagggaggctaccctccagcaaagcgccatcatgatggtgagatgtat
ggtgggccatttggtggtcaacagccacagcagcagcctcaggctccacctaatgcaccc
acatcggcacagccagaaatgtataaccagttcggcagctcttatcctggaccagagcgg
cggcctcctggaccacaaaaccagttccctttcccttttggaagggaccgcatgcagcct
ggctcaggccccaactctcaaggatctatgccacctcagatgatgagcagctccatgcag
tcaggtcctgatggtcctcaggctggtatgtggcagggcagaggcgagatgggattcccc
aactatccaaacagacaagggccacttggtgggcctactcagggcccgggatatcatggc
atgaaccgatctgaagagatgctgtcatctgagcagcgtatgaaccatgaagggccatgg
ccagggcaaaggcagcctgcatacagcccagctggggctgggccacccatgagccgcccc
ctgcagtccaactaccagtctccccaagccatgcaaaaccacattccacaggtgtccagc
cccactcccatgcctcggccgatggagagcaggacatccccaagcaaatctccctacata
cacagcaacatcaagatgcagaaggcaggtccaccagtgcccgcatcccatattatccct
tcatctgtacagccacccatgatgaggagagatcctccgttccctcccggatctgtagag
gccactcagcctgttctcaagacccgtaggcgactcacaatgaaagacataggtacacca
gaagcatggcgagtcatgatgtccctaaagtcgggtctgttagcagagagcacatgggct
ttagacaccattaatatcctgttgtatgatgacaacagtatctctaattttaaccttatt
cagctccctggtttcctggaactaatagttgagtattttaggcgttgcctcattgagatc
tttggcattctgagggaatatgaagttggtgatccaggacagagaaccctgctggacccc
aatgccctcaaagaagtagagaatggcgaggatgaagaagagccagtggtaatgggaatg
gaggaagatggtgaatctgaggaggagggtgaaggggaggaaaactcatcacagcagcgt
gtagaacgtgtgtcagcagtggagccacaaataaagacagagaagaaggtgggtgagtca
aagaaagatgaagagggcaaagtaatggaaagcattttgcctgcagaaccaaaaacaaca
gaagcaccctctctagatctttgtgtgactcaggagaggccaaaacaggccagcaagttt
gacaaacttcccttgaaagtggtgaaaaagaaggatccatttgtagtagactgctctggc
aagcttgggcggcttcaggagtttgacagtggactggttcactggagtattggtggaggt
gatactacagagcacattcagacccattttgagagcaagaatgatctactgcagtcaagg
atccggacaccgtctactcaaacatgtagacggaaaaaagcatcagagatgattgagagt
gagccacccgtggtcccttcatgtagtgcagagcgaatgaaagaagaggagcagacacaa
ccacagcagtcctctacaagacagttaaacgatagcattacagaagatgaggaggagaaa
cctgccaatgtcccggagtcttcactggaatcaatattgcagaaagtggaagaggagcca
gaaggctcgaaccaagaggccagtaagccggttctccccagcatcagttcttcctcacag
agtcagcgctctgtcactgttctagaggatgaaccgcacagcaaggacgaagccccacta
atcacgctttcagactggcaggactcactcgcccgccgctgtgtctgtgtctccaatata
gtccgcagtctttcgtttgttcctggcaatgacttggagatgtccaagcatccagggctg
ctgctgctattgggccgccttgtgctgcttcatcatcgtcatccagagcgtaaacaggcc
cctttaacgtatgagaaggaagaagaggcagacaaggacattggccagaaggaggaatgg
tggtgggactgtttggaactgctgcgagaaaactgcttggtcacactggcaaacatttca
ggtcagcttgacttttccatctactctgagagcatctgcttgcctctgcttgatggcttg
ctccactgggctgtgtgtccttctgcagaagcccaggatcccttcccgtctcttgggctt
aatgcagctttatctcctcagagactggttctggaaactctcagcaaactcagtatccaa
gacaataatgtggaccttattctggcaacacctcccttcagtcgactagagaagcttttt
gggaaccttgtacgtctggtcggggaccggaaggttgctgtgtgccgggagatggcagtc
gtgttattggccaaccttgcccagggtgacagccttgcagcccgtgccattgcggtacaa
aaaggcagtatagggaaccttttgggtttcctagaggacagtttagcggccacgcagttc
caacagagccaagggtccctgctgcacatgcagggggcgcactttgaacctacaagtgtg
gacatgatgcgccgggctgctcgggctctacacgcccttgctaaggtcgaggagaaccac
tctgagtttacgctctatgagtcgcggctactggacctctcagtctcccctcttatgaac
tcttcagtgtcccatgtcatctgtgatgtactgtttctgattggccagtcatga
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integrated database retrieval system
