Tachysurus vachellii: 132845784
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Entry
132845784 CDS
T09596
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132845784 (ddx61)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132845784 (ddx61)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132845784 (ddx61)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132845784 (ddx61)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132845784 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
132845784 (ddx61)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132845784 (ddx61)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
132845784
NCBI-ProteinID:
XP_060726028
LinkDB
All DBs
Position
5:complement(16978180..16986041)
Genome browser
AA seq
471 aa
AA seq
DB search
MATARTQIPTSVMGVTKQNGQTGSQTATVLSASQKGSSIPHTSGGIRFGDDWKKSLQLPE
KDTRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA
KNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQVSQICINMSRHMGGVKVMATT
GGTNLKDDIMRLDEMVHVVIATPGRLLDLMKKGVAKAGKVQMMVMDEADKLLSQDFVTLI
EEIIGFTDKNRQILLYSATFPTTVQKFMSKHLKKPYEINLMDELTLKGITQYYAYVTERQ
KVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDF
RNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITS
DDRFNLKAIEDQLVTDIKPIPGSIDKSLYVAEFHSINHEEEEEKDAALSAS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcaaggacccagattcccacctcagtcatgggagtcaccaaacaaaatggg
cagacagggtcacagacagcaacagtgctcagtgcctcccagaaaggaagcagcatacca
cacaccagtggtggtatcagatttggagatgactggaagaagtccctgcagctcccagaa
aaagatacgagagtgaaaacctcagatgtgactgcaaccaaagggaatgagtttgaagac
tattgccttaaacgtgaattgttaatgggcatttttgaaatgggttgggagaagccatct
cctattcaggaggagagcattcccattgccctgtcaggaagggacattcttgcaagggcc
aaaaatggcacagggaagagcggagcctacctcatccctctcctggagaggattgaccta
aaaaaggatcatattcaagccatagtaatggtgccaactcgtgaactggctctgcaggtg
agccaaatctgtatcaacatgagtaggcacatggggggagtgaaggtcatggccactact
ggtggaactaatctaaaggatgatatcatgcgcctggatgagatggtacatgtggtgatc
gccacaccaggcaggctgctggatcttatgaagaaaggtgtggccaaagctggcaaagtc
caaatgatggtgatggatgaggcagacaaattgctctctcaagactttgtcaccctcatt
gaagaaattattggatttacggacaagaatcgtcagattctactttattctgccaccttc
cccactactgtacaaaaattcatgtcaaaacacctaaaaaagccctatgagattaacctg
atggatgagttgacactcaagggcattactcagtactatgcttatgtaacagagagacag
aaagtgcactgcctcaacacacttttctccaggctccagatcaaccagtctataatcttt
tgtaactcaacccagagggtggaacttttggctaagaagatcacacaattgggctactct
tgtttttacatccatgcaaaaatgatgcaggaatacagaaatcgcgtgttccatgacttc
agaaacggcctctgtagaaacctggtttgcacagatctttttacaagaggaattgacatt
caggctgtcaatgtggtcatcaactttgactttcccaaaaatgcagagacctacctacac
cgcattggaagatcaggtcgctttgggcacctgggtctggccattaatctgattacttca
gatgatcgtttcaatctgaaggccattgaggaccagctagtgacagacattaagcccatt
cccgggagcattgacaagagcctgtatgtggcagagttccactcaatcaaccatgaggaa
gaggaagagaaggatgctgcactcagcgcatcttaa
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