Tachysurus vachellii: 132845841
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Entry
132845841 CDS
T09596
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132845841 (ptbp2a)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132845841 (ptbp2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
132845841
NCBI-ProteinID:
XP_060726143
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All DBs
Position
5:complement(18664349..18678099)
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AA seq
510 aa
AA seq
DB search
MDGISDVAVGVKRGSDELLSSSMYNSPNSGMSSISDGTSNGSDSKKLRVEERVGEAPPSR
VLHIRKLPSEVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTP
HIRNVPVFIQYSNHKELKTETNQSGTPTSGSGDGTLSTPSSPVLRIIIDNMFYPVTLDVL
QQIFSKFGTVMKIITFTKNNQFQALLQYNDATSAQQAKVALDGQNIYNACCTLRIDYSKL
VNLNVKYNNDKSRDYTRPELPAGDGQPAVDPSVAVAFGKDSNSLLGKIPGALSPLSAAAA
AAAAAGRVALSGHSGTGVLLVSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQ
MADMNQAQLAMSHLNGQKMYSKIIRVTLSKHQTVQLPRDGLDDQGLTKDFTNSPLHRFKK
PGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFNNSGGTVKAFKFFQDRKMALIQLSTV
EESIQCLIDLHNYNMGNNHHLRVSFSKSTI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggtgtgaagagggggtcagatgagctgctgtcc
agcagcatgtacaacagtcccaactctgggatgagcagtatcagtgatggcacatccaat
ggaagtgacagcaaaaaattgagagttgaagaaagggttggagaggctcctccatcacgc
gttctccatatcaggaaactacccagtgaggtttcagaaacggagatcatcgccttagga
ttgccttttggaaaggtcactaatatccttaccttgaaaggcaaaaaccaggcattcctt
gagcttagcacggaagaagcagctataaccatggtgaactactattcagctgttacaccc
cacattcgaaatgtcccagtcttcattcagtattcaaatcacaaagagctcaagactgag
acaaaccagtctggaacacccacatcaggctccggtgatggaacgctctcaacacccagc
agtccagttttgaggattatcatagacaacatgttctaccctgtcactctagatgtgttg
cagcagatcttctcaaagtttggcacagttatgaaaatcatcacattcacaaagaacaat
cagtttcaggccttgctacaatacaatgatgcaacgagtgcacagcaagctaaagtggca
ctcgatggtcaaaacatatacaatgcttgctgtacacttcgtatagactactccaagctt
gtcaacctgaatgtgaagtacaacaatgataagagcagggattacactagaccagagctg
ccggcgggtgatgggcagcctgctgtggacccctcagtggcagtggcctttggcaaggac
tcgaactcactgctcggtaagatcccaggtgcgttgagtcccctgagtgcggcggcggca
gcggcggcggcagcaggacgagttgctctgtctgggcactcgggtaccggagtgctcctg
gttagcaatctcaatgacgagatggttacgccccaaagtctgtttaccctcttcggagtg
tatggtgatgtgcagcgtgtgaagatcctctacaacaaaaaagatagtgcactgatacag
atggcagatatgaatcaggcccaacttgcaatgagtcatctcaatggtcagaagatgtat
tcaaaaatcatccgggtgacactgtccaagcatcagactgtgcagttaccaagagatggc
ttggatgatcaaggccttaccaaggatttcaccaattctcctcttcatcgtttcaaaaaa
cctggctccaaaaacttccagaacatctttcctccctctgccacccttcatttgtcaaac
atcccgcaagacataactgaagatgacctcagagtactgttcaataactccggaggcact
gtgaaagctttcaaatttttccaagatcgcaaaatggctctaattcaattatctacagtt
gaagagtccattcagtgcttgattgacctacacaactacaacatgggcaacaatcaccat
ctgagggtttcattctccaaatcaacaatttaa
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