Tachysurus vachellii: 132845849
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Entry
132845849 CDS
T09596
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132845849 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tvc03310
]
132845849 (rorc)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132845849 (rorc)
Nuclear receptors [BR:
tvc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132845849 (rorc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132845849
NCBI-ProteinID:
XP_060726156
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Position
5:complement(18838061..18856481)
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AA seq
482 aa
AA seq
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MMRAHIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQSSSVQYSCSRQSNCLIDRASR
NRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLFAEVERHQQQQQQQQRLQASQGDPDP
LPTYKPSKEPRGRPTHLIQPLVPTFPYNLDPELNCSSEVHPYQGSATGEAQAAALAYRSS
QRGGESSSFSTLRVFDHRRSTPETILSIPGSEMGLRVFDTENLFCPYPTSTHIEELCASI
FRSHRETGQYCVEELQALRWKFFSREEILAYQNKSVDEMWQHCAVRLTDAVQYVVEFAKR
IPGFRQLGQNDQIALLKSGSMEVVLVRMSRIFNMENSTVFFDGKFAGTELFKSLACCDFI
ASVFDFAHGLCALRLTEQQVALFSALVLINADRPCLEDRDRVLRVRKDVELALSHILHRD
NQESLLHKLYQKLALLKNLCTLHIEKLRWFRQYFPVTVHSLFPPLYKELFVSDTDIHTMV
TL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagctcatattgaggtcattccttgtaagatctgtggagacaagtcatcaggc
gtgcactatggggtcatcacttgtgaaggctgcaagggatttttccgaaggagtcaatcg
tccagtgtgcagtattcttgctctaggcagagtaactgcctcattgaccgggccagcagg
aaccgctgccagagctgccgtcttaagaaatgtgttgcacagggaatgagccgagatgct
gtgaagtttggccgcatgtcaaagcgtcagagagattctctttttgctgaggtggagagg
catcagcagcagcaacaacaacagcagcgtctccaggctagtcaaggtgatcccgaccct
ctgcccacctacaagcccagcaaagagccccgaggtcggccaacacatttaatccagccc
ctggttcccaccttcccctacaacctggacccagagcttaactgctcttcagaggttcat
ccatatcagggtagtgccacaggtgaggcccaggctgcagctttggcctacagaagttct
caaaggggtggagagagcagcagcttttcgacactgagggtctttgaccacagaagatct
acaccagagaccattctgagcattccaggaagtgaaatgggattacgagtttttgacact
gaaaacttgttctgtccttaccctacgtcaacacacatagaggagctgtgtgcaagtatt
ttccgctctcacagggaaacgggtcagtattgtgtggaagagctccaggcccttaggtgg
aagttcttcagcagggaggagatccttgcttaccaaaacaaatctgtggatgagatgtgg
cagcactgtgcagttcgtttgacagatgcagtacagtatgtggtggaatttgcaaagcgc
attccaggcttccgtcagcttggtcagaatgatcaaattgctcttctcaagagtggttcg
atggaagtagttctggtccgcatgagtcggatatttaatatggagaacagcacagtcttt
tttgatggcaagtttgctggaactgaacttttcaagtctcttgcctgttgtgattttatt
gcatcagtatttgacttcgcgcacggtctatgtgctctgaggctgacagagcagcaggtg
gcgctgttcagtgcgcttgtgctcataaatgcagatcgtccatgtctggaggacagagac
agagtgctgagagtgagaaaagatgtggaattggccctcagtcacatcctacacagagac
aaccaagaaagtttactgcacaagctgtaccagaagttggcactgttgaaaaacctgtgt
acgctgcacattgagaaactgcgctggttccggcagtatttccctgtgactgtgcactct
ctcttcccaccactttataaggagctgtttgtctcagacactgatatacacacaatggtt
actctctga
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