Tachysurus vachellii: 132845967
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Entry
132845967 CDS
T09596
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tvc00535
]
132845967 (col14a1a)
Proteoglycans [BR:
tvc00535
]
Extracellular matrix (ECM) proteoglycans
Others
132845967 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_Tor_3rd
Pur_ac_phosph_N
Interfer-bind
Fn3_Dep-1_2nd
VWA_3
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
132845967
NCBI-ProteinID:
XP_060726400
LinkDB
All DBs
Position
5:21167479..21249320
Genome browser
AA seq
1879 aa
AA seq
DB search
MDKYRRGLLSHSSEGMQVVRPRMTVWWLLIFLALVQFPEPTKGQIAGPRRLRFKVIGPGK
LHVLWKEPKGEHDGYRFIYSSEPDGERNELRIGKGQTKAIINDFNPTKEYTVKVIAVSGS
QQSRALEGSFAAQAHEFDRESTQPQRIKEMPTEDGSELSGVDQFVCTTSAHADIVILVDG
SWSIGRLNFRLVRTFLESLVNAFDVGIDKTRIGLAQYSGDPRVEWHLNAFTTKESVIDAV
KSLPYKGGNTLTGLALTYILKNSFKPESGSRSNVPKIGILVTDGKSQDAVDVPAQSLKDA
GVELFAIGVKNADENELKVIASEPHDTHTYNVADFSIMNTIVEGLTKTVCEGVQQQEKDI
KRDSVPDDPLYSPQDLVTSEVTARSFRVSWSHAPDSVLKYRVVYYPSKGGRPEEVVVDGT
ETTAVLKDLSSLTEYEIAVFAVYATSASEALRGSETTLALPVVSGLELYDVTHSTMHARW
RSTDGASGYMIVYAPISSETADETEVKVTDTVTDFRLVGLSPDTEYTVTVYTMFGDEASD
PATVQANTLPLRAPRNLRVTELDHNSVRLNWDAPSSTVKSYRLKYAKSNGEQTNEVETGP
MSNVYLRNLASQTEYTVSVFAVYDEDQSEPLKGIFTTKLVPAPRTIRIDEVTPDSFQVSW
TQPGNGVELYKLTWRPFGGGDAKEVVVPGNINTYVVNDLSPLTEYEVLLSAIYSDEAESS
AVPALETTLPMPATTAFPSTSPPVTRLGVTNLRVDDETTYSLQVSWGMDDADVEMYRVTY
VSQRGDRAEESVLVPGSRKSVMLQPLLSDTEYKITVNPIYPEGEDPEGAFSLSSIGRTLQ
LTAPSNLRVSEEWYNRFRLTWDTPSSHTMGYRIIYQPTSVSGPALETFVGEDVNTLLILN
LLTGTEYSVKVISSYTTGSSEPLTGTARTLFLGVSGLSTYQVRMNSMCAQWQPVSQASLY
RVIIESLLNGHKEEHRVSGGASRQCFFNLSPNLQYKISVYTQLENMEGPAVTIVDTTLPA
PTQPPTPPPTTAQVPTIPSAKEVCKAAKAELVFLVDGSWSIGDDNFQKIIRFLYSTTGAL
DIIGPEGTQVAIVQFSDDARTEFKLSSYRDKESLLDAVQRITYKGGNTKTGRAIKHVKES
IFTEESGVRRGIPKVLVVLTDGRSQDDVNKISKDLQTEGYIIFAIGFADADYGELVNIAS
KPSEKHVFFVDDLDAVNKIEEQLITFVCEAATATCPSLLISGNTLAGFRMMEMFGMVEKD
YSNVQGVSMEPGTFNSFPCYRLHKDALISQPTKYLHPEGLPSDYTVSVLFRILPETPQEA
FALWEVLNKANEPLVGLILDNGGKTLTFFNYDYKGDFQTVTFEGPDIRKIFYGSFHKLHV
AISKTSAKVVIDCKIVGEKPINAAGNITTDGLEVLGRMVRSRGSRDNSASFQLQMFDIVC
STSWASRDKCCELPGLRVEKDCPALPHACTCSQDSKGPPGPSGPPGGPGVRGSRGDRGEP
GSAGPQGPTGEIGPPGPQGPPGPQGPSGLSIQGPPGPTGEKGEKGDSGLPGPQGVPGASG
GPGRDGPPGQRGLPGKNGPQGQQGPPGPIGSPGAPGAQGTAGPKGSHGDHGPPGIPGSKG
ERGERGDMQSQAVVRSIARQVCEQLIQSHLSRYNSILNQIPSQSVVRTVPGPPGEPGRQG
SPGPQGEQGPPGRPGFPGGNGLSGRPGERGLPGEKGEKGSPGVGTQGPRGLPGPPGPSGE
GRTGSQGPPGRPGSQGTPGRPGSPGNSGPAGPPGYCDQNACLGYNIGVQQLPPSSYQNYG
PTDTNDEEQEEEEEDPYGGYRRYPPQYYQPNYPNPRVAQPGTASSGATMRERGTHRFSRS
LNEKSGAQSTTQEDDKSAH
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggataagtacagaagaggcttgctgtctcactcgtctgaaggaatgcaggtagtcaga
ccgagaatgaccgtgtggtggctgctaatattcctggcactggtgcagtttccagaacct
acaaaggggcaaattgcaggcccacgaagactacgatttaaagtcataggtcctggcaag
ttgcatgtgttatggaaagagccaaagggagaacacgatggctatagatttatatacagc
agtgagccagacggagagaggaatgagcttcgaattggaaagggtcaaaccaaggcgata
ataaatgacttcaatcccacgaaggagtacacagtcaaggttatagctgtgagtggtagt
cagcagagcagagcacttgaaggaagctttgcagctcaggcccatgaatttgacagagaa
agcacccaaccacagagaataaaggagatgcctacagaggatggttctgaactatcagga
gtggatcagtttgtgtgcaccacatctgcacatgctgatattgtcatcctggtagatggc
tcatggagtatcggaaggctcaatttccgtctggtgcgcacattcctggaaagcctggtt
aatgcttttgatgtgggaattgataaaacccgtataggactggcccagtacagtggagat
cccagggttgagtggcacctcaatgcctttaccactaaagagtctgtcattgatgctgtc
aaaagcctgccatacaaaggaggaaacacactcacaggtttggcccttacctacattctg
aagaacagcttcaaaccagaatctggttctcgaagcaacgttcctaaaattgggatcctg
gtcactgatggtaaatctcaggatgctgttgacgttcctgcgcagagcttgaaggatgct
ggtgttgaactctttgccattggagtaaagaatgcagatgaaaatgagctgaaggtcatc
gcctctgagccacatgatacacacacctacaacgtagctgacttcagcatcatgaatact
atagtggagggactgaccaagactgtctgcgagggagtacagcaacaagagaaagacatt
aaaagagattcagtccctgacgatccgctatactctcctcaggacttggtgacctctgaa
gtgacagcacgaagtttccgtgtgtcctggagccatgcaccagacagtgttctgaagtac
cgtgtggtttactatcccagcaaaggaggtcggccagaagaagttgtggtggacggcaca
gagactacggctgtgctgaaagacctcagctcgctgaccgagtatgagattgctgtgttt
gctgtgtacgcaacctcggccagtgaggccctgaggggcagtgagaccacactggctctg
cctgtggtcagtggcctggagctgtatgatgtgacccacagcaccatgcatgctcgatgg
aggtctacagatggggcttctggttacatgattgtgtatgcacctataagcagtgaaact
gctgatgagactgaggtcaaagtaacagacaccgtgacagactttagacttgtgggttta
agtccggatacagagtacacagtgacagtgtacaccatgtttggagatgaagccagcgat
cctgctactgtgcaggcaaacaccttgcctttgagggctcctcgtaatcttcgagtcaca
gagctggaccacaactcggtgcggctcaactgggatgcaccatcaagcacagtcaaaagc
tatcgcctgaagtatgccaaaagtaatggtgaacaaactaatgaggttgaaacaggtcca
atgtctaacgtgtacttgaggaacctggcttcccaaacagagtacacagtgtctgtgttt
gctgtgtatgatgaggatcagtcagaacccttaaaaggaatcttcaccacaaaacttgtt
ccagctccacggaccattaggattgatgaagtgacaccagatagtttccaggtgagctgg
acacagccagggaacggcgtggagctttataaactcacctggagaccctttggaggagga
gatgctaaagaggtggttgtaccaggcaacattaatacctatgtggtgaatgatctttct
cctcttactgaatacgaagtgctgctgtctgctatctacagtgatgaggctgagagcagt
gctgtacctgcattagagactacattgcccatgcctgctactacggctttcccctctaca
tccccaccagtgacacggctgggtgtgaccaacctgcgggtggacgatgagaccacatac
agtctgcaggtcagctggggcatggacgatgcagatgttgagatgtacagagtgacctat
gtcagtcagagaggagaccgtgcagaagaatcggtgctggtcccaggcagtagaaagagt
gtgatgttgcagcctcttctctcagacacagaatacaagatcacagttaaccctatttat
ccggagggagaagatccagagggcgcattctctctgtcctctattggacgtacattacaa
ctgactgcaccaagcaacctaagggtgtctgaggaatggtacaaccgcttccgcctaacc
tgggacacaccgtcttcacacaccatgggctacaggatcatctaccagcctacttctgtg
tcgggtcctgctctggagacgtttgtaggagaagatgtgaacacactgctgatcctcaac
ctgctgactggcactgaatacagcgttaaggtcatttcttcatacacaacaggctctagt
gagcctctaactggcacagcaaggacactgtttctgggagtcagtggcctcagtacgtac
caggtgcggatgaacagcatgtgtgcacagtggcagcctgtcagccaggcctccctctac
agggtcatcatcgagtcactgctcaatggtcacaaagaggagcacagagtaagtggtggt
gcctccaggcagtgtttcttcaacctgtcgcctaacttgcagtacaagatcagcgtctac
acacagctagagaacatggagggccctgctgtcaccatcgtggacaccacactaccagct
ccaacccagccaccgacgccacctcccacaactgcccaagttcccaccatcccatcagct
aaagaagtttgtaaagcagccaaagcagagttggtgttcttggtagacggttcctggagc
ataggagatgacaacttccagaagatcatccgctttctatacagcaccactggggctttg
gatatcattggtcctgaaggaacacaggtggccatcgttcagttcagcgatgatgccagg
actgagttcaagctcagctcctacagggacaaggagtctctgctggatgctgtacagcgc
atcacctataagggaggaaacaccaaaacaggtcgagccattaaacacgtgaaggagagc
atctttacagaagagtcgggtgtgaggaggggaattcccaaagtcctggttgtgctcaca
gatggtcgctcacaggacgacgttaacaagatctccaaagacctgcaaacagaaggttac
atcatctttgccattggctttgctgatgcggattacggggagctggtgaacattgcaagc
aagcctagcgagaaacatgtcttctttgtagatgatctggatgcagtcaataaaatcgaa
gagcagctcataacatttgtttgtgaggcagcaacagcaacttgtccgtctttgctgata
agtgggaataccttggcaggtttccgtatgatggagatgtttgggatggtggagaaagat
tacagtaatgtgcagggtgtttccatggagcctgggactttcaacagcttcccctgctac
aggctgcataaggatgctctcatctcacagccaaccaaatatctgcaccctgagggactt
ccttctgactacaccgtgtcagtgctgttccgcatcctgcctgaaactcctcaggaggcc
tttgcattgtgggaagttctcaataaagccaatgaacccctggtgggtctcatcctggac
aatggtgggaaaacgttgacattctttaattatgactacaagggtgatttccagacagtg
acctttgaaggacctgacatcagaaaaatcttttatggtagttttcacaagcttcatgtg
gcaatcagcaagacctctgcaaaggtagtgattgactgtaagatcgttggcgagaagccc
atcaacgctgctgggaacatcaccaccgatggactggaggttctgggacgaatggtacgc
tcgcgtggcagcagggacaactcagcatcgtttcagcttcagatgtttgatattgtctgc
agtacatcatgggccagccgagataaatgctgtgagctcccaggcttgagagtagagaaa
gattgccctgctctgcctcatgcgtgcacctgctctcaggacagtaaaggaccacctgga
ccctcgggacctccaggtggtcccggtgtaagagggtcaagaggagaccgaggggaacca
ggctcagcgggacctcaagggccaaccggtgaaattggacctccaggacctcaggggcct
cctggaccacaggggccaagtggactctctatccaaggaccaccaggacctacaggagaa
aaaggagaaaagggtgactcaggtctgccaggtcctcagggtgtgccaggagccagtgga
ggacccggcagagacggcccaccaggacagaggggtttgcctgggaaaaatggaccacag
gggcaacagggcccaccaggaccaattggcagtccaggtgctcctggagcgcaaggaacc
gctggacccaaaggatcacatggtgatcatggaccacctggtattcctggttccaaaggc
gagcgaggagaaaggggcgacatgcagtctcaggcagttgtccgctctatagcacggcaa
gtgtgtgagcaattaattcagagccacttgtctcgctacaactcaatcctgaaccagatc
cctagtcagtctgtagtccggacagtgccaggccctccaggggaaccaggtcgtcagggc
tctccggggccacagggagaacaggggcctccaggcagaccaggcttccccggaggtaat
ggactaagtggccggccaggagagagagggctcccaggagagaaaggagagaaaggcagt
ccaggagtggggacacagggacctcgtggcctcccaggacctccaggtccttccggtgag
ggtcgcacaggaagccagggtcctccaggcaggcctggatctcagggcactccaggtcgc
cctggaagtcctggaaactctggccctgctggaccaccaggttactgcgaccagaacgcc
tgcttagggtacaacataggagtacaacagttacctcccagttcctaccaaaactacggg
cccaccgacactaatgacgaagagcaggaggaggaggaagaggacccgtacggtggatac
cgccgctacccaccccagtactaccagcccaactatcccaaccctcgtgttgcccaacct
ggcactgcttcttccggtgccacgatgagggagcgaggcacacaccgcttctcccgtagc
ctgaatgagaagagtggagctcagtccacaacacaggaagatgataaatctgcacactga
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