Tachysurus vachellii: 132846045
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Entry
132846045 CDS
T09596
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC132846045
Organism
tvc
Tachysurus vachellii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
rve
rve_3
zf-H2C2
zf-CCHC
Asp_protease_2
gag-asp_proteas
RVP
Motif
Other DBs
NCBI-GeneID:
132846045
NCBI-ProteinID:
XP_060726541
LinkDB
All DBs
Position
5:complement(22069836..22090429)
Genome browser
AA seq
2828 aa
AA seq
DB search
MRVPAEDRVELVKQHLKDEAKATVKFMMEGKEETVDNLFSVLLDTYGDKVPIGTRLKDFY
DRAQNAGETIRSYAYDIREQLHRVQRREPNRVADVGNVLKEQLVLGLRDDFLRREMKRRL
KSEPDLTFVQLMQAAIVWSEEEETQTPSNVRSSTRTRGVVNVTAVQDAPSALSLEKLHEA
IQKIAACQEDLYQAVYGKERNKPPPSHPKKQPLKDSEGRYICYSCGEPGHTSRYCSQTGK
LKRELARPQHIVDSAEMFEDESRGAVKKSPGPSLIRCHTAEWMADDTAEKLKDSAFGDCL
VIDVKIAGVRTKCLLDTGSEVSTISESHFKEHFGEQKLKLSSACWVKLTAANGLDIPVLG
CLQADVECLGKILPGKCIFVLNDTSPDVKEMKGVSGIIGMNVLNEIQSLFISAEGMEKVN
KYTRRDEAQVRRVLARVKKEVGHDGRIAYVKIAGKQAVTIPPRCEKVLEGRCGVSSKIMS
QVLVEPAAGTSLPKGLLVAHVLARTEDGKVPVRMLNLSEKTVRLAPRSRVASLYRPKEVI
TKEVLEFQEDDGVLHVKEMARDNGPADETSLAQLPVPVEVNSEGLTQAQLKKLVELLTKH
RDIFSKDDQDYGYTTAVLHNIPTGDAPPIKQHHRRIPPHIFQEVKXVQNLLLQGILTESS
SPWVSPAVIVMKKDGSVRFCCDYRKLNQVTCKDAYPLPRVDESLDALGNAKLFSTLDLTA
GYFQVAMSDKDREKTSVTTPFGLFEWSRMPFGLCNAPATFQRLMGVVLGDLAFDVLLVYL
DDVIVFSKDFESHCERLELVFNRLRQHGLKLKPSKCFLLRAEVKFLGHRISAEGIKVDDE
KVKALEMWPNPKSVREVRQVLGFMSYYRKFVPRFAQIAKPLHALVGGGKKNKRPVTFFWS
QECQTALNELKKCLMSPPILAYPDFTMPFTLTTDGSHHGLGAVLSQKQGGNERVVAYASR
GLRRSEKNDKNYSSFKLELLALKWAVTEKFREYLMYSKFTVITDHNPLRYLDSANLGAVE
QRWAAQLAEYSFEVSYKPGRLNTNADALLRIPSREVPEKNDDGKDFIQLRADEVRACLWP
AKKVDQEESVKKVAVQTAIRGEMSGYSWSEIGKQQRNDPLIFPILKVVTENKRPSRVDQN
GMEPRMKKLAREFDRLKLHQGVLFRRILDPRDGEEIWQIVVPERLQREVYESTHEHGGHF
GERSTLNKMRRNYYWPTMSADLSCWVRQCKRCTLAKDVFPRLRAAMTCSNVSAPLEVLAM
DYTQLEQSAGGXENVLVLTDMFTRFTVAVPTKNQTASTTAKALLKHWFVNYGCPARLHSD
QGRCFEANVIKELCKLYGIGKSRTSPYHPQGNSQCERFNRTMHDLLRTLPPEKKRDWKTH
LPELVMAYNSHVHSSTGYSPFYLLFGRDARLPMDVLGEKDLEDDEIDNLDDWVKSHHTRL
KTAVEIANAASQEASRRRKRIYDRKSCGALVRAGDRVLLRNRKPRGRNKIQDKWENTPYI
VIKQNHADIPVFTIKPEKGGLTKVVDRDQLRHCSFPTPRTHRHIMRDQPDSDTDMSDIVC
FPETSQCPIHHAHTGVDQEGLGEVDQPEGNEGQDNISDLDLRLQDNSDDADISGDEMELL
EMEWQGLVGGECNVYMQPVKEDSTLIFEPDVKHQWPDGLEFTVSLVRLKKGAPTNITMEV
YNDTDHDVTLKGQTPIGTLQLVKNVFPASMFEVPANPNSVGVCHIQPADNGLDNSSPNEW
LLPVDVSHLDKHQRQVVQQMLREECHSFSKSDNDIGCIRNLQLSISLKDDEPVNRTYMSV
PKPLYREMKEYLHDLIAQGWVEKSNSSYSSPIVCVRKKDGSLRLCIDYRDLNRKTHPDRQ
PIPRVQDIMDSLGGNCLFSSLDQGKAYHQGFMSRESKDLTAFVTPWGLYEWVRIPFGLMN
GPAAFQRCMEECLEGLRDEICIPYLDDTLVFSKTFENHVQDVRKVLQRLRQHGIKLKPSK
CELFKSEVRYLGRIVSAERSKVDPADKEAVRSLKDKQPKNVGELRRILGLLSYYRQYIKD
FSHIANPLYDLLKSTPEDNAHLKESQKRSKTKCKKLGVPSSKPITWTELHQSTLHKLIDC
LLQPPVLAFPDFSQPYILHTDASAQGLGAVLYQKQNEKLRVIAYGSRTLSAAEKNYHLQS
GKLEFLALKWSITEKFRDYLYYAPTFTVYSDNNPLTYVLSTAKLNATGCRWVAELADFHF
TIRYRPGRENIDADTLSRLPLDIGTMMKECSEELSSDIIGATIQAVEAQEGPSIPWSVST
TCSSIEACPVVPTITPLSVNEIKEAQLNDEDISPVYECKLSGTKPPVKHLKTYSLKTKCL
FREWKKLTINKDGILCRSTSTRTQLVLPEKFKGTVLRELHDEMGHQGTDRTLSLIRERFF
WPYMQADIEHYVTKTCRCLMQKKPFHETRAPLTNIITTQPFELISNDFLHLDRCKGGFEY
ILVVVDHFTRFAQAYATTSKSGKTAADRIFNDFALKFGFPSRIHHDQGGEFENQLFEQLQ
KYCGVIGSRTTPYHPQGNGQAERFNRTLLQMLRTLSERAKRSLTGRSDPKVHLKKPQTSQ
VESDDESEDEVDFHYVPPQVPQPNHVVEPESLEPLPTTESDEQPSGVLEQVPASMSSVES
DQEDEEPPAGTESAEQEIDLPVVEQAPSPMASPESDQEGQREETYQPPGRQRYPPRIYVV
GLISNNNEVAYLQEIKNLETWCQTNNLLLDASKMKELIVDFSRDQERKYQPLTINGTLVE
RVKSFRYLGVHISQDLSCSCHISTLGAKNFLNLHFLTGSITAWFGNSTKLSREWCGQKNV
SSTLSSLT
NT seq
8487 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgcctgctgaggacagggttgagctagtaaaacagcacctaaaagatgaagcc
aaagccacagtgaagttcatgatggagggaaaggaggagactgttgataatcttttctct
gttctccttgacacctatggagataaagtgcctattggaacaaggctgaaagatttctac
gatcgtgctcagaatgcaggtgaaacgatacggtcctacgcatatgacattcgagaacaa
ctgcatcgtgttcagcgtcgagaaccaaatagggtggccgatgttggaaacgtcctgaag
gaacagttagtgcttggcttaagagatgactttctgcgacgcgagatgaagcgcaggctt
aaatctgagccagatctaacttttgtgcagctgatgcaagcagcaattgtctggtcggaa
gaggaggagacgcagacacctagtaatgtaaggtccagtacccggaccagaggagtagtg
aatgttactgcagtacaggatgctccttctgccttgtcgctagagaaactgcatgaagcg
atccagaaaatcgctgcctgtcaagaggacttatatcaagctgtgtacggaaaagaaaga
aataagccaccaccaagccatcctaagaaacaaccgttaaaagacagtgaaggccgatat
atttgttattcatgtggtgaacctggacataccagtcgttactgttcacaaactggcaag
ttgaagagagaactagcccgacctcagcatatagtggattcagctgaaatgttcgaggat
gagtcaagaggagcagtgaagaaaagtccagggccctcgttgattcgatgtcacacggca
gagtggatggctgatgataccgctgaaaaactgaaagacagtgcttttggggactgccta
gtcattgacgtgaagattgccggtgttcgaaccaaatgcctcctggatacaggatcagag
gtatctaccatatccgagtcgcactttaaagaacactttggagagcaaaagctgaagcta
tcctctgcatgctgggtcaagctgaccgcggccaatggtttggacattcctgtcttggga
tgcctgcaggccgatgtagaatgtcttggaaaaatactgcctggaaaatgtatatttgtc
ctcaacgacacaagtccagatgtgaaagaaatgaaaggtgtgtctggaatcatcgggatg
aatgtacttaatgaaattcagtctttgtttatctcagcagagggaatggagaaagtcaac
aagtacactcgacgggatgaggctcaggttcggagagtgcttgctagagtgaaaaaggaa
gtaggacatgatggaaggattgcatatgttaaaattgctggaaaacaagctgtcactatt
ccccctcgttgcgagaaagtgctggagggacgttgtggagtatcatctaaaataatgagt
caagtgctagttgaaccagcagctggaacaagtttgccaaaagggcttttagtggcgcat
gttcttgctagaacagaggacgggaaggtccctgtgcgtatgctgaacctgagtgaaaag
actgttagacttgcccctcgatccagagttgcttctctgtacagaccaaaggaggtgatc
acaaaagaagtgcttgaatttcaggaagatgacggcgtacttcatgtcaaagagatggca
agagacaatggaccagccgatgaaacctcgctcgcacagttaccggttcctgttgaagta
aattctgaagggctaacacaggctcaactcaaaaagctagtggagttgctaacaaagcac
agagacattttctctaaggatgaccaggactatggctatactacagctgtcttgcacaac
attcctacaggcgacgcaccaccaataaagcagcatcatcgtcgtataccaccgcacata
ttccaggaagtcaagnnagtccaaaatctgctgttacaaggaatcctcacagagagtagt
agtccctgggtatcaccggccgttattgtcatgaagaaggatggaagcgtacgtttctgt
tgtgattacagaaagctaaaccaagtgacgtgtaaggatgcatatcctctcccaagggtg
gatgagtctctagatgcattgggtaatgccaaactgttttctactctagatctgactgct
gggtacttccaggtagcaatgagtgataaagacagagagaagacttctgttactactcca
tttggcctgttcgagtggtctaggatgccattcgggctttgtaatgccccagccaccttt
cagcgcctcatgggggtggttttaggtgacctagcctttgatgttcttctagtctacctg
gatgatgttattgttttctctaaagactttgaaagccactgtgagaggttggaacttgtc
tttaaccgtttgagacagcatggcctaaaactaaagccaagcaagtgctttctcctacga
gctgaagttaagtttttggggcaccgaatttctgccgagggaataaaagtggatgacgag
aaggtcaaagccctggaaatgtggccaaatcccaaaagtgtcagggaggttaggcaagta
ctcggatttatgagctactaccgaaaattcgtcccaaggttcgctcagattgctaagcct
ttacatgcattggtagggggaggaaagaaaaacaaacgcccagtaactttcttctggagt
caggaatgtcagacggcattaaatgagttaaaaaagtgcttgatgtcaccccccatactt
gcgtaccctgatttcactatgccctttacacttaccacggatggaagtcatcatggatta
ggagctgtactgagtcaaaaacaaggaggcaatgagcgtgttgtggcgtatgcaagtaga
ggtctgaggaggtccgagaagaatgacaagaattatagctcattcaagctggaactgctg
gcgttaaaatgggcggtcacagaaaagttcagagagtatctcatgtattcgaaattcact
gtcattacggaccataacccgctgcgttaccttgactcagctaaccttggagctgttgaa
caacgctgggcagcacagctagcggaatacagttttgaagtaagctataaacctggccgc
ctcaacacgaatgcagatgccctattgagaataccttccagggaggttccggagaaaaat
gatgatgggaaagatttcatacagctgagagctgatgaagtgagagcatgcttgtggccg
gccaagaaagttgaccaagaggaatcggttaaaaaagtggcagttcaaacggcgataaga
ggggaaatgagtggttacagctggagtgagattggaaaacagcagagaaatgaccctttg
atttttcccattcttaaagtagtgactgagaataaaaggccaagcagagtggaccagaat
ggtatggaaccaagaatgaaaaaacttgccagggaattcgaccgtcttaagctgcatcag
ggagtactgtttagacgcattctggaccctagagatggagaggagatctggcagatagtt
gtgcctgaacgtctacaacgtgaagtgtatgagagtacacatgagcatggaggccatttc
ggggagagaagtaccttgaataagatgcgacgcaattactactggcctactatgtctgca
gatctttcatgctgggtgaggcagtgtaaaaggtgtacgctagccaaggatgtctttccc
agacttagagctgctatgacctgtagtaatgtctcagccccattagaggtccttgccatg
gattacacacagcttgagcaatctgctggagggtaggaaaatgtactggtcctgaccgac
atgtttaccaggttcacagtcgctgttcctactaagaatcagacagccagcaccacggcg
aaagccctgcttaagcattggtttgttaattacggttgcccagctcgtctacattctgat
cagggcaggtgtttcgaagccaacgtaatcaaagagctttgcaaactttatggtataggg
aaaagtcgcaccagcccctatcatccgcagggaaactctcaatgtgagcgcttcaatcgt
accatgcatgatctattaagaaccttgccacccgagaagaaaagagattggaagacacac
cttccagagctggtaatggcttacaacagccacgtccattcatccactggttattcccca
ttctatctactattcggaagggacgcacgtttaccgatggatgtgcttggagagaaagat
ttagaagacgatgagattgataacctggacgattgggtgaaaagtcaccatacaagattg
aagaccgctgtggagattgcaaatgcagcatcccaagaagcttccagaaggagaaagagg
atatatgaccgcaagtcgtgcggagctcttgtgagggctggagatcgggtgctattgcga
aaccgtaagcctaggggtaggaacaagattcaagacaaatgggagaacacaccgtacata
gtgataaaacaaaatcacgcagacatacctgtgtttaccattaaaccagagaaagggggt
ctgacaaaagtagtggaccgggatcagctccgacattgttcgttcccgacacctcgtaca
caccgacacataatgagagatcagccagactcagatactgacatgtcagacattgtctgt
tttccagaaacttcacaatgccctattcaccatgcacacaccggggtggatcaagagggg
ttaggggaagtagatcaacctgaaggtaatgagggtcaggataacatatctgatttggat
ttgagattgcaagataattcagatgatgcagatatttctggtgatgagatggagctgctg
gagatggagtggcagggtttagtggggggggaatgtaacgtgtacatgcagccagtgaaa
gaggacagcacactcatttttgaacctgatgtaaaacaccagtggccagatgggcttgaa
ttcacagtcagtctagtgaggctaaaaaaaggagctccaaccaatatcacaatggaggtg
tacaatgacacggatcatgatgtaaccctcaagggccagaccccgatcggtacattacag
cttgtcaagaatgttttccctgctagtatgtttgaggtgccagcaaaccctaactctgtt
ggagtatgtcatatccagcctgcagataacggtcttgataacagcagtcctaatgaatgg
ctcctgcctgtcgatgtcagccacctggataaacaccagagacaggtagtacagcaaatg
ttaagggaagagtgccattcattttctaagtcagataatgacattgggtgcatcagaaat
ttgcaattgagcatctcccttaaagatgatgaaccagttaatcgtacttacatgtctgta
ccaaagcctctgtatcgtgaaatgaaagaatatttacatgacctcatagcacaaggctgg
gttgaaaaatcaaactcatcgtactcttctccaatcgtgtgcgtaagaaagaaagacggc
agcctccgtttatgcatcgattatcgggacctaaacagaaagactcacccagatcgacag
ccaatcccgagggtgcaggacattatggacagccttggtggtaactgtttgttttcgtca
ttggaccaggggaaggcctatcaccaggggtttatgtcaagggagagtaaagacctaacg
gctttcgtgacaccctggggcctatatgaatgggtgcgtatcccttttgggctgatgaat
ggtcccgcagccttccagcgctgtatggaagagtgcttagaaggcttgcgagatgagatc
tgcatcccataccttgacgacaccttggtgtttagtaagacctttgagaaccatgtccaa
gatgtcagaaaagtactgcaacggcttaggcaacatggcatcaaacttaagccaagtaag
tgtgagcttttcaaatctgaagtccgttatctgggtagaatagtctcagcagagcgaagt
aaagtcgatcctgctgacaaagaagctgtccgatccctgaaagacaagcaaccgaagaat
gttggtgagttgaggagaatacttggtctacttagctactataggcagtacattaaagat
ttctctcacattgctaaccctttgtatgacctgttaaaaagtactccagaagataatgcc
cacctgaaagaaagccagaaacgatcaaagacaaaatgcaagaaacttggtgtcccatca
agtaagcccattacctggactgaactacatcagagcactcttcataaactaattgactgt
ttgctccaaccccctgtattagctttccctgacttttcacagccttatatactgcatacg
gacgcatcagctcaaggcttaggtgcagtattataccagaaacaaaatgagaaacttcgt
gtgattgcctatggatcccgtactctatcagctgctgagaaaaactaccacttgcaatca
ggcaagcttgaatttctcgctttaaagtggtcaatcacagaaaaatttcgtgattacttg
tattatgctccaacattcactgtatatagtgataacaacccccttacatatgtcctgtca
accgccaaattgaatgccacaggttgcaggtgggttgcagaattggcagatttccacttc
acaatcagatatcgcccaggtcgtgaaaatattgatgctgacacactgtcccgattaccc
ctcgacataggaacgatgatgaaagagtgttctgaggagttgtcatctgatataataggt
gcaacaatccaagctgtagaagctcaagaaggtcccagcatcccatggtcagtctcaacc
acctgctcatctattgaagcctgcccagtagttccaacaataactccattgtcggtgaat
gagatcaaagaagctcaactgaatgatgaggatattagtcctgtctatgaatgcaaactg
tctggaaccaagccaccagtgaaacatctgaaaacatacagcctcaaaacaaaatgcctg
tttcgtgaatggaaaaagcttaccattaataaagatggcatcctctgccgaagcacttcc
acacgcactcagttggtcctccccgagaaatttaaaggaacagtcttgcgggagcttcat
gatgaaatgggccatcaaggtacagatcgcactctttcactcatccgtgaacgtttcttt
tggccatatatgcaggcagacattgagcattatgtcacaaaaacatgcagatgcctgatg
cagaaaaagccctttcatgagacgagagcccccttgacaaacattattacaactcagccc
tttgaattgatctcaaatgactttctccacttagaccgctgcaaaggaggttttgagtat
atactggtggtagtagatcatttcacccgattcgcccaagcatacgccactacctctaaa
tcaggtaaaacagctgcagatcggatctttaacgactttgccttaaaatttggcttccct
tctcgcatccatcatgatcaaggtggagagtttgagaatcaattgtttgaacagctccaa
aaatactgtggtgtcataggctccaggacaactccatatcatccgcaaggcaatggccaa
gccgaacgttttaacaggacgttgttacaaatgctaagaacgctctcagaaagagcaaaa
agatctttgacaggaagatcagacccaaaggtacatttgaaaaagcctcaaaccagccag
gtggaatctgatgatgaaagtgaagatgaagtcgatttccattatgtaccaccacaagta
cctcagccaaaccatgttgtggaacctgaaagcctcgaaccactacctactacagagtct
gatgagcagccaagtggggtcctggaacaagttcctgcttcgatgtcatctgtggagagt
gaccaagaggatgaagagccacctgcaggtaccgagagtgcagaacaagagattgactta
cctgttgtcgaacaagctccttctcccatggcatcccctgaaagtgaccaagagggtcaa
agagaggaaacgtaccagccacctggaaggcagagatacccaccaagaatctatgtagtg
ggcctcatctcaaacaacaatgaggtggcctacctacaggagattaagaacttggagaca
tggtgccagacgaacaatctccttctcgatgccagcaaaatgaaggagctaatagtggac
ttcagccgagaccaggagaggaaataccaaccactaacaatcaatgggaccctagtggaa
agagtgaagagtttccggtaccttggtgttcacatctcgcaggatctgtcatgttcctgt
cacatcagcactctgggtgctaagaactttctgaacttgcacttcctgacgggaagcatc
acagcctggtttgggaacagcaccaagctctccagagagtggtgcggtcagaagaacgta
tcatccacactgagctccctgacctga
DBGET
integrated database retrieval system
