Tachysurus vachellii: 132846124
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Entry
132846124 CDS
T09596
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132846124 (cicb)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132846124 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
Motif
Other DBs
NCBI-GeneID:
132846124
NCBI-ProteinID:
XP_060726658
LinkDB
All DBs
Position
5:complement(23995497..24039175)
Genome browser
AA seq
2551 aa
AA seq
DB search
MRSLKKAKGRSNLSTRAKSVRKRGDKHDRQSQTTPAAVSPQKNITSKLDSSEEKTVKRSN
TPNKEGLKGQIKGLSVDVDQAEQIVVRVNKMTTSENTSLKTQNITMTNSITNNPLSTNIP
ANSSNKSITNHSPITLSSRKTATFKARVPKKKYMYEHGTISTSPVSPPVPPLALNSNHLS
KICNPITPNSHLVASNVVTDADNIMSDNINSKVLADNKTTTEASTLNCLDRGEVVKDELP
CTRKNTVEQVKTDEFGDAAPNSACSSSTETASENFPDLEVVESFNVHQSLGTSLNRPKSP
LTRALSLPPNLTQNNYKLEQECFLEIAEALAKGLKNQRVLARHQRTKDIEGEDPIKECVF
IRGVVRGATKEQLNVELQINGEEVQLLLPFHTLVNHPDKTTDLILDAPPPGNDPVEVGTR
VCVPYGEDKGKEWYREGVVSQMDSHPAVACPYRVLLHEEKNHKDAGNKRDEGQQRTGVQA
VWVSRQNLRLLVPPWEGDMQEREERERREDVDVEREMCQLSRGMTIGGIKPPQKISDIGG
QQYEGTPTSSSASSPAVMMSNSALIIVTGRDSQVSKDTDRDRARERERERKQLQTPEVDL
EVLRLNLAPLQDAVGTLISGVPKTVRHSHHRQIISKPSGYSSPISVVRGLAGTSLGTHLT
GPLSGSPQSPASSAFVGTDGLHLQPHPSTLPPSPSSKGLLTILDKSSTASQNSAPIPGSS
ASSSASSSRSRTPLSAAQQIYKKGDVVCTPNGIRKKFNGKQWRRLCSKDSCMKESQRRGY
CSRHLSMRTKEIEGSGGERELKRGGGSSSGTATPSDLRGRTSSEFDWEETSRDSSETSSR
GTDSRPRLVLPSLLPQDFSRFDFDECEAATMLVSLGSSRSGTPSFSPISNQSPFSPAPSP
SPSPLFGFRPANFSPITTLTVLPPRRHRQTSGTCSSKLSTLVAEKDREKLAPGIVPSFQT
SLTFTVPVSPNKHKSDTSQPTALVMQDCTKLEVDNNTGDLSLGTSFHVLSPQTTTFSHCK
RPSSSTASSLPPSPLTLESGSQRTVSQQILHDSPVIVRNPEVPLAKFADCPLVKVADKEG
TNSKHDNLTGVLPGAGLQMPVPINAAASNNGAVLLHSPSTTLVLVSSISSLPNPNPTSLT
TQSSPAISCISVPSPAPESASFGSGERDHGKGGITKLQQPVPCHPAPTALLPLLLPAETL
HPVPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSTQPGEGQQPVNHSQA
GTLKKESQGGSVVKEVVEGASNLALRPVPSIDDLPPERERERETEKERPDSETESDVDDP
FLPGILPDPPVSASPGKRRSQSLSALPKDDKNSPGKREKDHIRRPMNAFMIFSKRHRALV
HQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSS
SESRNAPGGKDVRERSMSETTEPPSVSVSSELKGMGPGVVGVSERAGGERLARPRAFSQS
AMHSLERSERSNPQVLAELAQICGDGGQFSSRGGAVSHVQRGVSEDMTSDEERMVICEEE
GDDDVIEDPYPASSIDLKCKEKVTDSDSENGSGDEGERKRIFAPVICSSASGPGHGRSIS
LSSYPSSKHSSDASIKRKRVIEGGEGEQRDGDCGASDCLSLSSSGQSISVSTSSALGAAR
VASTIVTNVVRPVVSTPVPIASKSGQDRKTTTPQTQLLIGSGVAGSGATLAPSGGGGHHS
SSLQSSVTAPGRQGGLSLVLGGTFQAPSAVQLITPPPSQNPATPATVTPTQSNGPAPLPL
LQPHILPTASPAPSAGQKAVTQVQYILPTFSANNPKSPSPQQPSQATSIFTLPTAPPTHA
SVANGKQTGYSPGPAVGMVNPGARVQTQSPVLQGKMLVPMATVRTTPAPSQQFPLMAPPL
PVQNGAQSGNKIIQIAPMPVVQSSLPTAGSSFPVTMAAATVVAPPGSTPSQAVLLPPPPT
RITYVQSTPGAPSPIPLVSTATGSTSQTASPAPGSAYVQSPLATFAAIAHSGQTLVQPLI
SGQPPLLAPPQSPNPAITAIYPSTSVTLATGVVSAATVSPGVVYTVSSPSILPKHTSSTS
VTHTSLSAPDRPGHGSAHAELDRQTDKLPVSHTDRLTKVGSSSTAPPPGAPLSLQPASPA
QPPLSAAISKLSPGPARPPQKVKATVANIPVGCYDGGGRGKEREKDREKEKERERGKEKE
SSSCFSFEVDKSGEVTPAAPTSLDDGSSEAEAHNAGEAGSASTRSKEANAKEAERKDSTS
SSPLPLSAPEPQSDKDNPLPKKLKSRPPPLKRPFDSVDKVLSEVFFEERFAELPEFRPEE
VLPSPTLQSLATSPRAILGSYRRKRKNSTGERDLDSSTDDPISPKRKSRRRSSCSSEPNT
PKSAAKCEGDIFTFDRPGTDGEDILGELEFDKVPYSSLRRTLDQRRALVMQLFQEHGFFP
SAQATAAFQARYSDIFPTKVCLQLKIREVRQKIMQTAAPAESIGTSDPASLPGPSAIEGG
GGSESAEAMRDEEQNNSEEPRNAGDSLDSTR
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgagatcactcaagaaagcgaaaggacgctctaacctgtccacacgggcaaagagtgtg
aggaaaagaggagataagcatgacagacagtcacaaactacacctgctgcagtgtcaccc
cagaaaaatattacatccaagttggacagctctgaagagaagacagtcaaaaggagcaat
actccaaacaaggaagggctaaaagggcagataaaaggactctctgtggacgtagatcaa
gctgagcaaattgtagttagggtcaataaaatgaccacttctgaaaacactagcttaaaa
acacagaatattaccatgacaaacagtataaccaacaacccactgagcacaaacatacca
gccaacagctcaaacaaaagcatcaccaatcatagtcccatcacactgtctagtaggaaa
acagctaccttcaaagccagagtgcccaagaaaaagtatatgtatgaacacggaactatc
agcacctctccagtcagtcctcctgtacctccacttgctcttaatagcaatcacctcagt
aaaatctgtaaccccattactcctaatagccaccttgtagccagtaatgttgtaacagat
gcagacaatattatgtctgacaacataaatagcaaagttttagcagacaataaaacaacc
acagaagcctcaacactcaattgtctggataggggagaagttgtcaaagatgaacttcca
tgtacgagaaaaaacacagtggaacaagtgaaaactgatgaatttggagatgctgcccca
aactctgcttgctcatcatcaactgaaacagccagtgagaactttccagatctggaggtg
gtggagtcttttaatgtgcatcaaagtttaggaactagcttaaacagaccaaaaagccca
ctaaccagagcactatccctgcctccaaaccttacccaaaacaactataaacttgagcag
gaatgctttttagaaatagctgaggcactggctaaaggccttaagaatcaaagagtgcta
gcacgtcatcagagaacaaaggatatagaaggagaagatccaataaaagaatgtgtcttc
atacgtggtgtggtgcgtggggctactaaagagcagctcaatgtagaattgcagattaat
ggggaggaggtgcaacttttgctcccgtttcatacattggtaaatcacccagacaaaact
actgacctcatcttagatgcccctccaccaggaaacgatccagtggaagtcgggacacgt
gtttgtgtgccttatggagaagataaagggaaggaatggtatagggaaggtgtagtgtca
cagatggactcgcatccagctgttgcttgcccttacagagtgctactacatgaagagaaa
aatcacaaggatgcagggaacaagcgagatgaggggcaacaaagaactggtgttcaggct
gtgtgggtatcacgacagaacttgcgccttcttgtcccaccatgggaaggagacatgcaa
gagagagaagaaagagagagaagggaagatgtggatgtagaaagagagatgtgtcaactt
agtaggggaatgactataggaggtataaagccaccacagaagatctctgatattggtggt
caacagtatgagggcacacccacttcttcatctgcatcctcgccagcagttatgatgtca
aacagtgcactaatcatagtaactggaagagacagtcaagtgtctaaggacacagataga
gacagagcaagagaaagagagagagaaagaaagcagctacagactccagaggttgacttg
gaagttttaaggcttaacctggcacctcttcaagatgcagtaggtactttgatttctgga
gtacccaaaacagttagacacagccaccacagacaaatcatttcaaagccttctggatat
tcaagtcccatttcagttgtccgaggtcttgctggcacatccttgggaacccacctgact
ggtccactatcaggcagcccacagtccccggcttcttcagcttttgttggaactgatgga
cttcatttgcagccccacccttcaactttgcctccctcacctagctcaaaaggtttgctt
acaatcttggacaaaagctccactgcttcccagaattctgctcctatcccagggagttct
gcttcctcctcagcttcctcctctcgatcacgaactccactttctgcagctcagcaaata
tataagaaaggtgatgtggtgtgcacacccaatggtatacgcaagaaatttaatggaaag
cagtggcgtcgtttgtgttcgaaggatagctgcatgaaagagtcacaacgtaggggctac
tgctctcgacatctctcaatgcgcactaaagagattgaaggatcaggtggagagagggag
ctaaagagaggaggagggagcagttcaggtactgcaaccccttcagacttgcggggccgg
actagcagtgagtttgactgggaggagacatcacgagacagtagtgaaaccagcagtcgg
ggaactgactcacgaccacgtcttgttcttccatcacttctgccacaggatttttcacgt
tttgactttgatgaatgtgaggctgctactatgcttgtgtctttggggagctcacgttca
gggacaccttcattttctcctatatcaaaccagtcacctttctctccagctccctctccc
tccccttctccactttttggtttccgtcctgctaatttcagtcctattacaactttaaca
gtcttacctcctcgtcgccaccgacaaacaagtggtacttgcagctccaagcttagtacc
ttagtggcagagaaagatagggaaaaacttgcacctggcattgtaccatctttccaaacc
agcttaacttttactgtacctgtaagtcctaacaagcataaatcagatacctcacaaccc
acagctcttgttatgcaggattgcactaaacttgaagtggacaacaacacaggagatctc
tccttaggaacttcctttcatgtactttctcctcaaacaaccactttttctcactgcaaa
aggcccagctcatccacagcttcttcactaccaccttctcctttaaccttagaatcaggg
tcacaacgtacagtctctcaacagatactacatgactctcctgtaattgtacgaaatcct
gaggttcctctagcaaaatttgctgattgtccactggtaaaggttgcagataaggaggga
acaaactctaagcatgacaacttgactggcgttctccctggtgcagggttacagatgcct
gttccaattaacgctgcagcatctaataatggggcagtcttattacatagcccttcaaca
actttggttctggtgtcttccatctcttcccttccaaaccccaaccctacaagtctcacc
actcaatccagccctgccatatcctgcatatcggtgccaagtcccgctcctgagtctgct
tcctttggatcaggagaacgagatcatggaaagggaggaataacaaaattacagcaacca
gttccatgtcatcctgccccaacggctttattgccacttttacttcctgcagagacatta
cacccagtaccctgcaaggacataatcatgggacgtccaggaaccgtgtggactaatgtg
gagcctcgctcggttccagtgtttccttggcattcgttggtgccatttctggcacctacc
caatcagatccatcgacacagcctggcgagggccagcagcctgtcaatcattctcaagct
ggcactcttaagaaagagtcccagggtggatcggtggtgaaggaggtcgtcgagggagca
tcaaaccttgctttgcgacctgttccctctatcgatgatcttcccccagagagagaaaga
gagagggagacggagaaagagagaccagacagtgaaacagagagcgatgtcgatgatccg
tttttaccaggcatcctcccagacccaccagtctcagcatctcctgggaaacgccgttca
cagtctctgagcgcgctgcctaaagatgacaagaacagccctggcaagagggagaaggat
cacatccggaggcccatgaatgctttcatgatcttcagcaagcgccaccgtgctctcgtt
caccagcggcaccctaatcaggacaaccgcaccgttagcaagatcctgggagagtggtgg
tacgctttgggacccaaagaaaaacagaaatatcacgacctagctttccaggtgaaggaa
gcacactttaaggcccatcctgactggaagtggtgtaataaggacaggaagaagtcgagc
agcgagagtcggaacgcaccaggtggaaaagatgtcagagagagaagcatgtcggagaca
acagagcctccgtctgtttctgtgagttctgagcttaaagggatggggccgggtgtggta
ggagtgtcagagcgcgctggaggggagaggcttgcacgccctcgtgccttctcacagagt
gctatgcacagcttagagagaagtgagaggagtaatcctcaggtgctagcagagctcgca
cagatatgtggagatgggggccagttttcaagccgtgggggagcagtgtctcatgtccag
aggggtgtgagtgaagatatgaccagtgatgaggagcgcatggtgatctgtgaagaggag
ggggatgatgatgtcattgaggacccttatcctgccagctccatagacttgaagtgtaag
gagaaggtgacagacagtgacagtgaaaatggatctggggacgaaggtgaacgcaagaga
atctttgctcctgtgatctgctcgtcagcgtcagggccgggtcacggacggagcatatct
ctctcctcctacccttcctccaaacactcctcagacgcttcaatcaagaggaagcgtgtg
atagagggaggagagggagagcaacgggacggtgactgtggtgcgtctgactgtctttcc
ctgtcttcctctggccagtccatttcagtcagcacatcttcagcactgggagcagcaaga
gtagcatctactattgtcactaacgtggtacgtccggtcgtcagtacaccagtgccaatc
gctagtaaatcaggccaagacagaaaaaccaccactcctcagactcagctgcttattgga
tctggggtggcaggaagtggggcaactttggcaccatcaggagggggtgggcaccattct
tcttctttgcagagttctgtaactgcacctggacgtcaagggggattaagtctagtattg
ggaggcacattccaggcaccatctgcagtgcagcttatcacaccccctccttctcaaaat
ccagcaacccctgccacagtaactccaacacagagtaatggtcctgcacctctgccactg
ctgcagcctcacatcctgcctacagcatcacctgcaccctctgcaggccaaaaagcagtc
acacaagtacagtacatcctgcccactttctctgccaacaatcccaagagcccctcccct
cagcagcccagccaggcaaccagtatcttcaccctgcctacagctccacctacacatgct
tcagtggcaaatgggaagcagactggatatagccctggccctgcagtaggcatggtcaat
ccaggagctagagtgcaaacacagtccccagtcttacagggcaagatgcttgttcccatg
gcaactgtgcggaccactcctgccccttctcagcagtttcccttgatggcacctcctctt
cctgtgcagaatggagctcagtcaggaaacaagatcatccagattgcccccatgcccgtt
gtgcagtcttcgcttcctacagcagggagttcattccctgtaaccatggcagcagccaca
gttgttgcccccccaggctctaccccctcacaagctgtacttctgccgcccccacccaca
agaatcacttatgtccagtcgactccaggagccccctcccctatcccgctcgtatctact
gcgacaggctccacctcccaaacggcctccccagcacctggatctgcatatgtgcagtct
cctttggccacctttgcagcaattgctcattcgggacagactttagtgcagccacttatt
tcaggtcagcctcctttgttagcaccgccccagtctcccaacccagccatcacagccatc
tacccctctacctctgtcaccctggcgacaggggtggtgtctgcagcaacggtatcaccc
ggtgtggtttatacggtctcaagcccctccatccttccaaaacacacttccagcacttct
gttacgcatacatccctgtcagcccctgacaggccgggtcacggttctgcacacgctgag
ctggacagacagacagataaactgcctgtctctcacactgacagactgactaaagttggc
agcagctcaacggctccaccgcctggtgcgccattgtctctacagcctgccagtccagct
cagccgccactttcagctgccatttctaaactttccccgggacctgctaggcctccacag
aaggtcaaggccacagtggcaaacatcccagtcggctgctacgatggaggagggagagga
aaagagagagaaaaagacagggagaaagagaaagagagggaacgtgggaaggagaaagaa
agcagcagctgtttctcttttgaggtggataaatcaggagaagtgactcctgctgctccc
acctcactagatgatggctcttcagaagcagaagctcataacgctggtgaagcaggttcc
gcaagcacacgcagcaaagaggccaatgctaaagaggctgaaaggaaagactctacttcc
tcttctccattacctctatcggcaccagagcctcagtcggacaaagataaccctcttcct
aaaaagcttaagtcccgccccccaccactgaagcgcccgtttgattcggttgacaaagtc
ctgtcagaggtcttctttgaggaacgatttgctgagctgccagagtttcgtccagaggag
gttcttccctcgccgaccttgcagagcctggccacttctccacgcgccattctgggcagc
taccgcagaaagaggaagaactccaccggtgagagagatttagactcctccacagatgac
cccatctccccaaagagaaagagccggcgtaggtctagctgcagctcagaaccaaacacc
cccaaaagcgctgccaagtgtgagggtgatatatttacctttgataggccaggtacagat
ggggaggacattttgggggaactggagtttgataaggtgccatactcctctctgagaaga
actctggatcagaggagagcacttgtcatgcagctattccaggaacacggcttcttccct
tcggcccaagccactgctgcattccaggcacgatattcggatatcttcccaaccaaggtg
tgcttgcagttgaagatccgtgaggtccgccaaaagatcatgcaaacggctgcgcctgcc
gaaagcatagggacttctgaccctgcctctttacccggcccttcagccatcgagggagga
ggcgggtccgagtctgcagaggcgatgcgagacgaggagcaaaacaactctgaggagccc
aggaacgcaggcgattcactggactccaccagatga
DBGET
integrated database retrieval system
