Tachysurus vachellii: 132846477
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Entry
132846477 CDS
T09596
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
tvc
Tachysurus vachellii
Pathway
tvc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132846477 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132846477 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132846477 (taf2)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132846477 (taf2)
Peptidases and inhibitors [BR:
tvc01002
]
Metallo peptidases
Family M1
132846477 (taf2)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132846477 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
132846477 (taf2)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132846477 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
CCDC106
SR-25
Motif
Other DBs
NCBI-GeneID:
132846477
NCBI-ProteinID:
XP_060727256
LinkDB
All DBs
Position
5:complement(32518446..32540163)
Genome browser
AA seq
1194 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFLYNDPTLEVCHHESKQRNLNYFSSAYAAAVSAVDPDAGNGELSIKVP
AELWKQGDEMKVLKVYIEFSLDQPKGGLHFVVPDMEGSMAERGAHVFSCGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLMETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEVLVDPYMHEVTHFCLPQLLPLLKHTMSYLHEVFEFYEEILTCRYPYSCFKTVFVDE
AYMQVSSFASMSIFSTNLLHSGLIIDQTPVTRRVLAQGLAQQFFGCFISRMSWSDEWVLK
GISGYIYGLYLKKTFGVNEYRHWIREELDRIVEYELKTGGVLLHPTFAGGKEKDSPTPHL
HFSIKHPHTLSWEYYKMFLCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLLSTSGFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YMSSGTQKYVGPIKVTVQELDGSFNHMLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSVLRKVDLAQADFMWQYQLRYERDVVAQEEAIVALEK
FPTAASRLALTDILEQEQCFYKVRMQACFCLAKIANSMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNNFINFQSYFLQKTMPVAMALLRDVQNLCPKEVLNFILDLIKYNDNGKNKFSD
NYYRAELIEALTNSLTPAISINNEVRTVDSLNPDVKLILEEVTRYLNMEKLLPSYRNIIT
VSCLRAIRMLQRNGHIPSDPSVFKSYAAYGHFVDVRLAALEAVVDYTRVDRSTEELQWLL
DMVQNDPVHYVRHRILNMLSKNPPFTKAAESPLCTEALVDQLWKLMNSGTWHDWRLRCDA
VNLYHNLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKSDSEGLELAPDMVFCSSVKEE
HVVMEPSLSSIALTPQGLKRKAETPLASPPEPGQVLQDEPMGKIAVKTRFPMHEDEDIDM
DTVHDSRAFIYHHLSMLDRPSTPGREPPIMEQAAMPMPATPIPTFAKEGASSSSSSKHHH
HHHHHHHEHKKKKKKHKHKHKHKHKHESKDKEKERDLHSFANSPASGRSPSLSD
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggaaaaaggacaaaggcttcgagagtccgcgaccttataaattaacacaccag
gtggtctgtattaacaacatcaacttccagaggaagtcagttattggttttgtggagctg
accatcttccccaccgtggtgaacctgaaccgcatcaaactgaacagcaagcagtgccgc
atttacagggtgcgagtgaacgagctggaagcaccatttctatataacgaccccacgctg
gaggtctgccaccacgagtccaagcagcgaaacctgaactacttctccagcgcttatgct
gcagcagtgagtgccgttgatccagatgcagggaatggagagctctctattaaagtgcct
gctgaactgtggaagcagggagacgagatgaaggtactgaaggtgtatattgagttctcc
ctggaccaacctaaaggagggctgcactttgttgtgcctgacatggagggcagcatggct
gagagaggagctcacgtcttctcctgcggataccagaattccactcggttctggttcccg
tgtgtggactcgtactctgagctgtgcacgtggaagctggagttcactgtggacgcctcc
atggtggccgtgtcgtgtggtgacctcatggagaccatctacactcatgacatgcgcaag
aagacttttcattatgtgctgcccatccccaccgctgcccccaacatctcactggcagtg
gggccattcgaggtccttgtggatccgtacatgcatgaggtgactcatttctgcctgcct
cagcttctgcccctacttaagcacaccatgtcgtacctacacgaggtgtttgagttctat
gaggagatcctgacctgccgctacccgtactcctgctttaagaccgtgtttgtggacgag
gcctacatgcaggtctcctcctttgcctccatgagcatattcagtacgaacctcctgcac
agcggattgattatagaccagactccagtaacacgccgcgttctggcacagggcctggca
caacagttttttggctgcttcatctcacgcatgtcatggtctgacgagtgggtgttgaaa
ggcatctccggctacatctacggtctctacctgaagaagacgtttggagtgaacgagtat
cgccactggatcagggaggagctggacaggattgtggagtacgagctgaaaacaggaggc
gttctgctgcaccccacgttcgccggaggaaaagaaaaagacagcccaacgccacactta
catttctctattaaacacccacacacactgtcctgggagtactacaaaatgttcctgtgc
aaggctcacctggtcatgaggctgatcgagaaccgcatcagtatggagttcatgctgcag
gtgtttaacaagttgctcagcctggccagcacagcttcatctcagaagtatcagtcacac
atgtggagccagatgcttttgtccacctctgggtttctcaaatccatctccaatgtgtca
gggaaggacattgggccgttgatcaagcagtgggtagaccagagtggagtggttaagttc
tttgggagctttgccttcaacaggaaaagaaacgtgctggagctggagatccgtcaggat
tacatgtcctccggcacgcagaaatacgtgggccccattaaagtgactgtgcaggaactg
gacggatcctttaaccacatgctgcagatcgaagagaacagcctgaaacatgacatcccc
tgtcactccaaaagcaggaggaacaagaagaaaaagatccctctgatgaatggagaagaa
gtggacatggacctgtctgccatggacgccgactcgcccctgctgtggatccggatcgac
cccgacatgtcggtgctgaggaaggtggacctggcacaagccgacttcatgtggcagtac
cagctgcgctacgagcgagatgtggtggcgcaggaggaggccattgtggcactggagaaa
ttccccactgctgcctctcgcctggcccttactgacatcctcgagcaagagcagtgcttc
tacaaagtgcgcatgcaggcctgcttctgcttggccaagattgcgaactccatggtgagc
acgtggcaaggacctccagctatgaagtccctgttcacgcgtatgttctgctgcaagagc
tgccctaacatcgtcaagaccaacaacttcattaacttccagagctacttcctgcagaag
accatgccagtggcgatggctttgctcagggacgtgcagaatctctgtcctaaagaggtc
cttaacttcatcctcgacctcatcaagtacaatgacaatgggaaaaataagttctcagat
aattactaccgcgcagaactgatcgaagccctgaccaactccttaactccagccatcagc
atcaacaacgaggtgcgtactgtggacagtctgaaccccgacgtcaagctcatcctggag
gaagtgacacgctacctgaacatggagaaactgctgccgagctacaggaacatcatcacc
gtcagctgcctgcgggccatcaggatgctgcagaggaacggccacatccccagcgacccg
agcgtctttaaatcctacgcggcgtacggccattttgtggacgtgagacttgcggcgctc
gaggctgtggtcgactacacaagagtcgacaggagcactgaggagcttcagtggctgttg
gacatggtccagaatgatcctgtacactatgtgagacacaggattctaaacatgttgtcc
aagaatccgcccttcactaaagcagcagagtctcctctgtgcaccgaggctctcgtggac
caactgtggaaactgatgaattctggtacctggcatgactggcgtttacgctgcgatgct
gtgaacctgtaccacaatctgtttggtctgaccaggccctcatgcctgcctctgccggaa
ctcggactcgtcctcaacctgaaggagaagaaggccgtcctgaaccccaccatcaaatcg
gattcagagggacttgagcttgcacccgacatggtcttctgtagcagtgtgaaagaggag
catgttgttatggagccgagtttaagcagcatagccctcactccacagggcctgaagagg
aaggccgagacgcctttggcttcgccccctgaacctggacaagtgctacaagatgagcca
atgggaaagatagctgtcaagacccgatttcctatgcatgaggatgaggatattgacatg
gacacagttcatgacagccgagcatttatctaccatcacctgagcatgctggatcgacca
tcaacaccaggtcgagaacctcctatcatggagcaggctgccatgcccatgccagctaca
cctattccaacgtttgctaaggagggtgcctcctcctcttcctcctcgaagcaccaccac
caccaccatcaccaccaccatgagcacaagaagaagaagaagaagcacaagcacaagcac
aagcacaaacacaagcatgagagcaaggacaaagagaaggagcgcgacctccacagcttt
gctaacagcccggcgagtggccgctcaccctcactgtctgactaa
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