Tachysurus vachellii: 132846660
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Entry
132846660 CDS
T09596
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132846660 (lingo2b)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
132846660 (lingo2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
Ig_2
V-set
LRR_RPS2
LRR_9
Ig_6
LRRNT
C2-set_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
132846660
NCBI-ProteinID:
XP_060727337
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All DBs
Position
6:11594341..11608482
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AA seq
607 aa
AA seq
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MLLSLFSCAVGFSLLPFLLFPYPTQGCPARCECSVPTRSVSCHRKRLAQVPEGIPIETRA
LDLSKNRLRIITPQNFSGLLLLEELDLSTNLLSSVEPGSFRAQPRLRTLRLRNNQLTLLP
RGALAGLSELTLLDISQNRLVILLDYGFEDQRRLRVLELADNELVFVAPRAFSGLPALRS
LTLQRCNLSAVPSHALAHLHGLTSLRLRQLDIAELLPHTFKGLGRLRHLEVDYWPALEAV
PSLALQGLNLSTLFVTHTNISTVPVLSHLSYLTHVNLSYSNVRVLPAGWLRGLDRLEVLQ
VRKAQLVRVEAQAFQGALSLRLLDLSYNRLTTLERATLPVSVALQNLLIGQNPLVCDCRL
RWLLQRTLSLQFGEVQPQCTTPAALAGKSFGDVVEPLLSRYVICTKPRVIAMSTQPAQAE
EGQKAWLYCTADGAPPPSVSWLTPHRRYITIKSTGRMVVHSNGSLEFRVVEPQDSGIYIC
VASNPAGNSTLSITLTVKSLGLRDGALYANRSFIFDPDYNSSSINGTEHYTIRMVLDFTT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGASSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttgttctcctgtgctgtgggcttctccctcctaccgttcctcctgttt
ccataccccacccagggttgccctgcccgctgtgagtgttctgtgcccacacgctcagtc
tcttgccaccgtaagcggctggcacaggtgcctgagggcattcccatcgagacaagagca
ttggatctcagcaaaaaccggctgcgcattatcacaccacagaatttctctggcctcctg
ttgctagaggagcttgacttgagcaccaacctgttgtcatctgtggagcccggaagtttt
cgcgcccagccgcgcttacgaacattgcgtctgcgcaacaatcagctgaccctcctgcct
cgtggtgcacttgccggcctgagtgagctcactctgctggacatcagccagaaccgtctg
gttatcttgcttgattatggctttgaggaccaacggcgtctgcgtgtgcttgaacttgct
gacaatgagctggtttttgttgcaccccgtgccttcagtggcttgcctgcattgcgctca
ctgaccctgcagcgctgtaacctaagtgctgtgcccagccatgcactggcgcacttgcat
ggtctaaccagccttcgccttagacagctggacattgcagaattgctaccacataccttt
aagggcttgggccgtctgcgtcatcttgaggtggattattggccagcactggaagctgtg
ccctctcttgccctgcagggtctgaatcttagcacgctcttcgtcacccataccaatatt
tcaacggtaccagtgttgagccacctgtcctacttgacccatgtgaacctgtcctacagc
aatgtgagggtgctgccagctggctggctgcgtggcctggataggctggaagtgctgcag
gtacgcaaagctcagttggtgcgtgtggaggctcaggccttccaaggggcactgtcactc
cgcctgcttgacctctcctacaatcgcttgactacgttggaaagagccacactgccagtg
tctgtggccctgcagaatctactgattggccagaacccattagtgtgtgactgccgtctg
cgctggctacttcaaaggacactgtccctacagtttggggaggtgcaacctcagtgcaca
acccctgctgctctcgctggaaaatctttcggtgatgtagtagagccactgctttctcgc
tacgtcatatgcaccaaacccagggtcattgccatgtcgacacaaccggcccaagcagaa
gagggacaaaaggcatggttgtactgcacagcagatggtgcgccacccccctctgtctcc
tggctgacaccacacaggcggtacatcaccatcaaaagcacagggcgcatggttgtccat
agcaacggttcgctggagttccgggtagtggagcctcaggacagcggcatttatatctgt
gtggcatccaatcctgcaggcaattccactctctccataacactaactgtcaaaagtctg
ggccttagagatggggctctctatgccaaccgcagcttcatctttgatcctgattacaat
agctcatcgatcaatggcacagagcattacacaatcaggatggttctggactttactacc
attcttgtgtctacggctatgggctgtctcagcttcctgggtgtggtccttttctgtttc
ctgcttctcttcgcttggagccgaggcaaaggcaagcaccgaggaagtgtggacatccaa
tatgttccacgcaagaggaaaggggccagcagtgagcttactgagaccagcggccccaga
cgtgtcaacatgaagatgatctga
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