Tachysurus vachellii: 132846816
Help
Entry
132846816 CDS
T09596
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tvc
Tachysurus vachellii
Pathway
tvc03040
Spliceosome
tvc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132846816 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132846816 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132846816 (srsf5a)
Spliceosome [BR:
tvc03041
]
Common components
Common spliceosomal components
SR proteins
132846816 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
132846816
NCBI-ProteinID:
XP_060727518
LinkDB
All DBs
Position
6:100711..104084
Genome browser
AA seq
282 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGGGGGGAGSRFSPRFGGYRQSRSAGSRSLSLYGPPVRTEH
RIIVENLSSRISWQVRKDLKDLMRKVGDVTFVDAHRANKNEGVVEFATHSDMKNAIEKLN
GTELNGRKLKLFEDRKRSRSRSRSRSSSRSRSRSRSKSGSRSHSREDKRESKREKRSRSR
SRSASRTPEKKTSAKSESRSRSRSPTPRKQSRSRSASTESQH
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtgtgtttatcggccgcctcagtcctcacgccagggagagagacgtg
gagaagttcttcaagggttatggacggatccgagagatcaacctgaagaacgggttcggc
ttcgtggagtttgatgaccacagagatgcggacgatgcggtgtacgagttaaacggaaag
gagctttgcagcgagagggtgaccattgagcacgctcgctctcgtcgtggtcgaggaggt
ggaggtggaggaggaggagcaggcagccggttctctcctcgattcggaggctaccgacag
tcacgcagtgcaggatccaggtctctctctctgtacggccctcccgtgcgcacagagcac
aggattatcgtggagaatctgtcgtcccgtatcagctggcaggtgagaaaagacctgaag
gacctgatgaggaaagtgggagacgtgacgttcgtggatgctcacagggcaaacaagaac
gagggggtggttgagtttgccacacacagcgatatgaagaacgccatcgagaagctgaac
ggtacggaactgaacggccgcaaactgaaattgtttgaggatcgtaagaggagccgcagc
aggagtcgctctcgcagctcctcccgttctcgctcccgttctcgctccaaatctggcagt
cggagccacagccgcgaggataagcgtgagagcaagcgagagaaacgctctcgcagccgc
tctcgttcagccagtcgcactccggagaagaagacttcggccaagtccgagtcccgctca
cgctcccgctctccaactcccaggaaacaatctcgctctcgctcagcatccaccgaaagc
cagcactga
DBGET
integrated database retrieval system
