Tachysurus vachellii: 132846874
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Entry
132846874 CDS
T09596
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03022
Basal transcription factors
tvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132846874 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
132846874 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132846874 (mnat1)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132846874 (mnat1)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132846874 (mnat1)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132846874 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
132846874
NCBI-ProteinID:
XP_060727631
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All DBs
Position
6:1162702..1172863
Genome browser
AA seq
310 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRL
QLFEDPAVDKEVEIRKKVLKIYNKRDVDFHSLGEYNDYLEQVEEIVFNLTNNVDIENTKQ
MMEQYQRDNRDIIQRNKAKLTREQEELEELLLMEQQDLEIKRLENLQEEQRHLHNKRKSK
QALLDELESSHLPASLLLAQHKERAAQLGSQIEKQKQTVKPATIFSTGILMGQTVSLAPV
ARMEEALYQYHPLQIETYGPAVPELEQLSRLGYLNHVRATTLQDLAGGYTSGLACHRAVQ
DAFSGLFACT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcagggctgcccgagatgtaaaaccactaaatacagaaacccgtctttaaag
ctgatggtgaatgtgtgcggacacacactttgtgagaattgtgtggagatgttgtttgtg
agaggttcaggtaactgtgttcagtgtgacactccactcaggaagagtaacttccgcctg
cagctttttgaagaccctgctgtggataaagaggtggagatccgcaagaaagtgcttaaa
atatataataagcgtgatgtggacttccacagcctgggagagtataatgactatctggag
caggtggaggaaattgtgtttaacctgacgaataacgtggacatagagaacaccaagcag
atgatggagcagtaccagagagacaacagagacatcatccagagaaacaaggccaaactg
acgagggagcaggaggaactggaggagctcctgttaatggagcagcaggacctggagatt
aagagactggagaacctgcaggaggaacagagacacttacacaacaagaggaaaagcaaa
caggccctgcttgatgagctggagagctcccatttgcctgcttccctcctcttagcacaa
cataaagagcgagcagctcagttggggagtcagatcgagaaacagaaacaaactgtcaaa
cctgccaccatcttctctacaggcatactgatgggtcagacggtgtctctagctccggtt
gctcggatggaggaggctttgtatcagtatcaccctctccaaattgagacctatggccct
gcggtgcctgaactggagcagctgtccagactgggttatctaaaccatgtaagagcgacg
actctgcaagatttagcaggaggctatacatcaggtctggcatgtcaccgagcggtgcag
gacgccttcagtggtctcttcgcctgcacgtaa
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