Tachysurus vachellii: 132847125
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Entry
132847125 CDS
T09596
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tvc
Tachysurus vachellii
Pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132847125 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132847125 (prpf38b)
Spliceosome [BR:
tvc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132847125 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
132847125 (prpf38b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
132847125
NCBI-ProteinID:
XP_060728104
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All DBs
Position
1:11204985..11216061
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AA seq
466 aa
AA seq
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MAGNQQQQQQQAVSKPPSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPADLIEWFEPFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDTQMKNRPRKPPQKEGKEDEEDGDWHRSRSPRR
TPSPRRSPNRSRSRSRHRERHGASFDRELERERDRQRKDKDRERDKGDRDRCADRDRDRE
RDRRHSQTPDRATEKRRSREQRNERKERDGESERERSRRKERDHKERSSGTERERGRSKD
KRAKGDDDAWRHKDEREERKHREERKSKRSSQSRSRERRHKGERSSRKCSRSRSRSRQEP
EEKSRRHECSHSKEHMHKHSRSRERSHRREASNGKNHMRMDTEGTP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaatcagcagcagcagcagcagcaggccgtgagcaaacctccttcagggaaa
cacggcaatgttttacctctatggggcaacgagaaaacaatgaatctaaaccctatgatt
cttacaaatgtgttatcgtctccgtatttcaaggttcagttgtatgagctgaagacctac
catgaggtcgtggacgaaatctacttcaaggtaacccatgcagagccctgggagaaaggc
agcaggaagactgcagggcagactggaatgtgcggaggggtgcgaggagtaggcacgggt
ggtattgtctccacagctttttgccttctgtataagctgttcacgctgaaactaactcgc
aaacaagtgatgggtctcattacacacacagactccccgtacatccgagcacttggcttc
atgtatatacgatacacacaaccccctgcagacctgattgagtggtttgagcccttccta
gatgatgaggaggagctggacgtgaaggccggcggtgggtgcgtgatgacagttggtgag
atgcttcgctccttcctcacaaaacttgagtggttctccacactgtttccacgtatccca
gtgcctgtgcagaaagccatcgacacacagatgaaaaaccgaccacgcaaaccaccacaa
aaagaaggcaaagaggatgaggaggatggagactggcaccgctcaaggtccccaaggaga
acaccgagtcctcggagatccccaaaccgttcccggagccgcagtcgccaccgagaacgg
catggagccagcttcgaccgtgagcttgagagagagcgggaccgacagcgaaaagataaa
gacagggaacgggacaaaggcgaccgagacaggtgtgcagacagggacagagatcgagag
agggatcgtcggcattcccaaaccccagatcgggccacggagaagcgaagaagtcgcgag
cagaggaacgagcgtaaagagcgggatggcgagagtgaaagagaacggagccgtcggaag
gagcgggatcacaaagagcgctcaagtggcacagagcgagaaagggggcgctcaaaagat
aagcgagccaaaggagacgatgatgcatggcgtcacaaggatgagcgagaggagaggaag
cacagggaggaacgtaagagcaagcggtcaagccagagtcggagtagagagaggaggcac
aaaggtgaacgttcgagtagaaaatgttcgcggtcacgctccaggagccgtcaggaacca
gaggagaagagcaggaggcatgagtgcagccacagcaaagagcatatgcacaaacacagt
cgcagccgagaacgcagtcaccgcagagaagcaagcaacgggaaaaaccatatgagaatg
gacactgaagggactccatga
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