Tachysurus vachellii: 132847170
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Entry
132847170 CDS
T09596
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
tvc
Tachysurus vachellii
Pathway
tvc04080
Neuroactive ligand-receptor interaction
tvc04082
Neuroactive ligand signaling
tvc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132847170 (gabrg1)
04082 Neuroactive ligand signaling
132847170 (gabrg1)
04519 Cadherin signaling
132847170 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132847170 (gabrg1)
Ion channels [BR:
tvc04040
]
Ligand-gated channels
GABA-A
132847170 (gabrg1)
SSDB
Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TcdB_toxin_midC
Motif
Other DBs
NCBI-GeneID:
132847170
NCBI-ProteinID:
XP_060728176
LinkDB
All DBs
Position
6:11443644..11453584
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AA seq
505 aa
AA seq
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MQCAPSVPVQHKPLLAQTHVFGSFLLGFARVSQAVSSSLSESCYFGIMVRTHPRRRRDAL
VWLLPGLLGVCIAFGHSKAEEEDYEDVPINKTWVLSPKVYDSDVTLILNKLLQGYDNKLR
PDIGGKPTIIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMV
GKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEH
SCPLEFSSYGYPKHEIQYRWQRRAVEVADQRYWRLYQFAFVGLRNSSDVAHTQSGEYVIM
TIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIS
RKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQNKKTKSSSAPKSSMENIR
PGTSLLQMNNIAPYHDDDDDFTYECLDGKDCTSFFCCFDDCRSGAWRENRMHVHVSKIDS
YSRIFFPTAFGLFNLVYWIGYLYLI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcaccatctgttccagttcaacacaaacctctgctggctcagacgcacgtg
tttggatccttccttctcggttttgctagagtttcgcaggccgtttcgtccagtctgagt
gagagctgttattttgggatcatggttaggacgcatccccgccggaggagagatgcgctg
gtgtggctgctgcctgggctgcttggagtctgtatagcttttggacacagtaaagctgag
gaggaagattatgaggatgttcctataaataaaacttgggttttatccccaaaggtttat
gacagtgatgtcacactgatcctgaataaattactacagggctatgacaacaaacttcga
ccagacattggaggcaaacccaccatcattgagacagccgtgtatgtgaacagcataggc
ccagtggatcccatcaacatggagtataccatagacatcttcttcgctcagacatggtat
gacagtcggctcaagtttaacagcagcatgaagctcctgatgctaaacagcaacatggtt
ggaaagatctggatccctgatacgttttttcgcaactcccgtaaatctgatgcccactgg
atcactacacccaaccggctccttcgactttggagcaatggacgtgtaatgtacactctg
aggttgactattaatgcggaatgctaccttaagctgcataactttcctatggatgaacat
tcgtgtcctctggagttttcaagctacgggtatccaaaacatgagatccagtatagatgg
cagcgtcgtgctgtcgaggtagctgaccaacgctactggagactttaccagtttgccttt
gttggcctgcgcaattcgtctgatgtggcacatactcagtctggagagtatgtgataatg
acaatcttctttgatctgagccgaagaatgggctactttacaatccagacctacatcccg
tgcagcatgatcgtagtgctgtcctgggtttctttctggatcaacaaagacgctgtgcct
gcccgaacatctttaggtatcacaaccgtccttactatgacaactctaagcactatatcc
aggaagtcattgccgaaggtgtcttatgtcacagccatggatttgtttgtgtctgtttgc
ttcatcttcacctttgctgcacttatggagtatggaacattgcactacttcactagtaac
cgtcagaacaagaagaccaagtcgagcagtgcaccgaaatcaagcatggaaaacatcaga
ccagggacgtctctactccagatgaacaacatagcgccttatcacgacgacgatgatgat
ttcacatacgagtgtttggatgggaaagactgcacaagttttttctgctgctttgatgat
tgtcgctcgggggcgtggcgtgaaaacaggatgcacgttcatgtgtccaaaattgactcc
tactcccgaatattcttcccaactgcttttggcctctttaaccttgtgtactggattggg
tacctctatctcatttaa
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