Tachysurus vachellii: 132847196
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Entry
132847196 CDS
T09596
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tvc04091
]
132847196 (atrn)
Lectins [BR:
tvc04091
]
C-Type lectins
Others
132847196 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_4
Kelch_5
Kelch_3
EGF_LMN_ATRN
CUB
Kelch_6
Kelch_2
PSI
EGF_TEN
EGF_Teneurin
NANM
PSI_integrin
DUF4842
EGF_laminin
EGF_2
EGF
TMEM100
Paramecium_SA
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
132847196
NCBI-ProteinID:
XP_060728241
LinkDB
All DBs
Position
6:12026959..12079784
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AA seq
1440 aa
AA seq
DB search
MERRDKSLTTRSLQTPAAAQNAFFLLITYNQSFSDKNRGFFKLCQLVFFLANKNMTGEVR
GARGRRRSVLLGLVRSGLRRPQWRTFILISAAVGGLVGLSAAAEAKECDKPCVNGRCDPA
SGSCVCEPGWLEEQCQHCGGRFRLTGPSGYLTDGPGNYKHKTKCTWLIEGQSNSILRLRF
EHFATECSWDHLYVYDGDSIYSPLLAAFSGLIVPEHYSNETVPEVVAESGYALLHFFSDA
AYNLTGFNISYRINMCPNNCSGRGVCRLANSSDVVQCECEEGWKGDACDVPYCASDCGYP
LQGRCQIKDKRCLCNPGWQGPDCSVSVPANVSFWTHEEFRGHSLARASHKAVVHEDIMWV
IGGHVFNYTKYQMVIAFNLSSQSWMSLNRSANSVTARYGHSLVVHEDNIYMYGGKIDSTG
NVTSELWVFHIRNQSWELLNPQAKEQYAVVGHSAHLVHLQPDGSEAVMLVVFGHCPLYGY
ISQVQQYNIVRNRWSVLDTSGALVHGGYGHSSVYDPQTRSIYIHGGYKAFNATKYGLAGD
LYRYNVDNSMWSILRDSGSYRYLHTAVLVGGNLLVFGGNTHNDTSMSYGAKCFSSDFMAY
NLACDEWTVLPRPDLYHDVNRFGHSAVYVNGVMYVYGGFNSLMLSDMLRFTPANCSAYNG
AEDCVTAVPGVRCLWNTTTSTCLPWETGKLQDQDMCLPRVYANSDKCDQYTDCYSCTVNS
NGCQWCSERCVPIHSNCTASLGAITEYEACPKGVHSYMCNKKTSCKSCAADQNCQWEARN
QECISLPENICGESWHLVGNSCMKLITAKDSYDNAKLACRSHSAVLASLTTQKKVQFVLK
ELQSRSAHVSEALNQSKLVTPWVGLRKVNVSYWCWEDMSPFTNTTLQWLPGEPSDAGFCG
YMAEPNFSGLKAAPCINSFNGSLCERSANHSVKQCRIPCALRSSCSECTSGGAECMWCSN
MRQCVDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCSQCLDQPGCGWCTDPSNTGRG
QCMEGSYRGPIQTLLHAPSSSRPSLVPAPQALLNVSWCPHENKYNWSFIQCPACQCNGHS
ACVNESICERCEDLTTGKHCESCISGYYGDPTNGGNCQPCKCNGHASMCNSNNGKCFCTT
KGIKGDRCHQCEVENRYQGNPLKGTCYYTLLIDYQFTFSLTQEDDRYYTAINFVATPDEQ
NRDLDMIINASKNFNLNITWATSFAAGTQSGEEIHIVSCSNIKEFKDSFSNEKYDFRSNV
NITFFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWA
SRRREQLLREMQQMASRPFATINVALETDEEPPDLIGGNVKAVPKPIALEPCFGNKAAVL
SIFIRLPRGPGGIPTPGQSGLAVASALVDVSQQLCVCYKEKSGGLRSRKQQPIAQPATCI
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagagataaaagtctgacaacacggtcactgcagactcccgcggcagcacaa
aacgcctttttcctcctcatcacttataatcagtcgtttagtgataaaaacagaggcttt
ttcaaactgtgtcagctggttttttttttagcgaataagaacatgaccggggaggttcgc
ggggcccgtggccgaagaaggagcgtgttgctcggcctggttcgctcaggcctccgccgg
ccacaatggcggacttttatcctcatttctgctgctgttgggggactcgttggactgtcc
gcagccgccgaggccaaagagtgcgacaagccgtgtgtgaacggccggtgcgacccggct
agcggcagctgcgtgtgtgagccgggctggttagaggagcagtgccaacactgcggcggc
cgcttcaggctaactggaccttctggatacctgacagatggaccagggaactacaaacac
aaaaccaagtgcacgtggctcatagaggggcagtcaaactctatactgaggctgcgcttc
gagcattttgccaccgagtgcagctgggatcacctatatgtatacgacggagactcgata
tactctcctctgctggctgcattcagtggtctgatcgttcccgagcactacagcaatgaa
accgttccagaggtcgtggccgaatcgggttacgcgctcctccacttcttcagcgatgca
gcctacaacctcacaggtttcaatatctcctacaggataaatatgtgtcctaataactgc
tcaggtcgcggtgtgtgtcgtctggctaactccagtgacgtggtgcagtgtgagtgtgag
gagggctggaaaggcgacgcatgtgatgtcccatactgtgcctcagactgtggctacccc
ctgcagggccgctgccaaatcaaagacaaacgctgcctatgcaaccctggctggcaaggc
cctgactgttcagtgtccgtacctgctaatgtttccttctggacacacgaggagtttaga
ggacacagcctggcacgggcatcccataaggctgtagtgcatgaagatatcatgtgggtg
atcggtggtcacgtgttcaactacacaaagtaccagatggtgatagcattcaatctctcc
tctcagagctggatgtctctgaatcgttcagccaactctgttactgcacgctatggtcat
tcactggttgtgcatgaggataatatttatatgtatggtgggaagattgattccacggga
aacgtgacatctgagctgtgggtgtttcacataaggaatcagtcgtgggagctgctgaac
ccacaagctaaagagcagtatgcagtggtgggtcactctgctcaccttgttcacctccag
cctgacggatcagaggcagttatgctcgtcgtcttcggtcactgccctctgtatggatac
atcagccaagtgcagcagtacaacatcgtgaggaacaggtggagtgttttggacacaagt
ggagccctggttcatggcggctatggccacagcagcgtgtatgaccctcagacacgttct
atctacattcacggtggctacaaggccttcaacgcgacgaagtacggactggctggtgac
ctgtaccgctacaatgtcgacaacagcatgtggtcaattctgagggacagcgggtcttat
cgctacctccacacagccgtgctcgtaggcgggaacttgttagtgtttggcggaaacacc
cacaatgacacatccatgagttacggcgccaagtgcttctcctctgacttcatggcctac
aacctggcatgtgatgagtggactgtgctgcccagacctgatctttaccatgatgtcaac
cgctttggacattctgctgtctacgtcaatggggtgatgtatgtatacggaggctttaac
agcctgatgctcagcgatatgctgaggttcactcctgccaactgttctgcctacaatgga
gcagaagactgtgtgacagctgtgccgggtgtgcggtgtttgtggaatactacaaccagt
acatgccttccttgggagacagggaaactgcaagatcaagatatgtgccttccccgagtg
tatgcaaacagtgacaagtgtgaccagtacactgactgctacagttgcacagttaactcc
aatggctgtcagtggtgctctgaacgctgtgtgcccatccacagcaactgcactgcttcc
ctgggtgcaataacagagtacgaagcgtgtcctaagggtgtccactcttatatgtgtaat
aaaaagaccagctgtaagagttgtgctgctgaccagaactgccagtgggaagccaggaac
caggaatgcatctctcttcctgagaatatctgtggggaaagctggcacctggttgggaac
tcgtgtatgaagcttattacggctaaggactcttatgacaacgccaagctggcctgccgc
agtcacagcgccgtgctggcttccctaaccacccagaaaaaggtgcaatttgtcctgaaa
gagctgcagagcagaagtgcacatgtgagtgaggctctaaatcaatccaaattagttacg
ccgtgggtcggcctgaggaaggtgaacgtgtcgtactggtgctgggaggacatgtccccg
ttcactaacaccacactgcagtggttgcctggggaacccagtgatgctggcttttgtggc
tacatggcagagcccaacttcagcggcctgaaggcagcaccctgcatcaattcctttaac
ggcagcctgtgtgaaagatcagccaaccacagtgtgaagcagtgtcggatcccctgtgct
ctgcgctcctcctgtagcgagtgtacaagtggaggtgcagagtgcatgtggtgcagtaat
atgaggcagtgtgtcgactccaacgcttatgttgcctccttcccctttggtcagtgcatg
gaatggtacaccatgaacagctgcccaccggaaaattgctctggatatcggacatgttca
cagtgtttagatcaacctggttgtggatggtgcactgaccccagtaatacagggcgggga
cagtgtatggagggctcgtaccgtggaccaatccaaaccctcctccatgccccttcatcc
tcaagaccttcccttgtaccagctcctcaagctttgttgaatgtgagctggtgtccccac
gagaacaagtacaactggtcctttatccagtgtccagcatgccagtgtaatggccacagt
gcatgtgtcaatgagagtatttgtgagagatgtgaagatctcaccactggaaagcactgt
gagagctgcatatccggttactatggtgacccgaccaatgggggcaactgtcagccttgt
aagtgtaatggccatgccagcatgtgtaattcaaacaatggcaagtgtttctgcaccacc
aagggcatcaaaggagaccggtgccatcagtgtgaagtggagaatcgttaccagggcaac
cctttaaaaggaacctgttattacactctgttgatagattaccagttcaccttcagcctg
actcaggaggacgaccgctactacactgctattaattttgtagccacaccagacgagcaa
aatcgagacctggacatgatcattaatgcctccaagaactttaacctcaacatcacttgg
gcaaccagctttgcagctgggactcagtctggagaagagattcatattgtctcttgcagc
aatattaaagagttcaaggacagtttctccaatgaaaaatatgattttcggagtaacgtc
aatatcaccttctttgtttacgtcagcaacttcacctggccaatcaaaatacagattgca
ttttcccagcacagtaacttcatggatctagtacagttctttgtcacatttttcagctgt
ttcctgtcccttctgttggtggcagcagttgtgtggaagatcaagcagagttgctgggca
tcacgacgaagagagcaactcctgcgagagatgcagcagatggccagtcggccgttcgcc
accatcaacgttgccttggagacagatgaggagccgcctgacctgattggtggaaatgtg
aaggcagtgccaaagcccatagctttggaaccatgttttgggaataaagccgcagtgctg
tccatctttatcagattacccagaggccccggaggcatcccgactccaggacagtcaggc
ctggcagtagcgagtgccctggtggacgtgtctcagcagttgtgtgtgtgctataaggag
aaatctggagggctgcgcagccgtaagcagcagccaatagcacagccagctacatgcatc
tga
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