Tachysurus vachellii: 132847206
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Entry
132847206 CDS
T09596
Symbol
alms1
Name
(RefSeq) centrosome-associated protein ALMS1
KO
K16741
alstrom syndrome protein 1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132847206 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvc03037
]
132847206 (alms1)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
132847206 (alms1)
Cilium and associated proteins [BR:
tvc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
132847206 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
132847206
NCBI-ProteinID:
XP_060728265
LinkDB
All DBs
Position
6:12436869..12449676
Genome browser
AA seq
2148 aa
AA seq
DB search
METLGEGEDGEIVNREIESWHQLPIEEDPSQFLGQTSGLLEADGIQGITLNSEGEMATMG
DSNVQPAANRFEFLQLELQDSCLSPALTLIPQGKAFLPSEFTLLHQTDLEFVPLRGSPDL
SIASERRSQMSRLDEDVESNLTHRSHEQASLSQHQLGTMSAILEDANSYCSLSQHSLSPG
SNYQATQIHDEEHNSGLLNNDEVQKEGKEQTDTDLDGRGNSCGQKLLEKDLGVASSRISS
STETVLSQTDVVLRSTDGPEGQNKHSALSQKQDAACTSIKEHEFRPSQSREQPQGGSSSL
LSQRRTMGRGSLSLSTRLSAISNITVRSTIKHSESSLAAPEGGNQTENKNTPIGQNVPLV
SEGGGLQRALWSSGSNKAADGSFLTSQPVYQSTPAVLLGRGALAAARLSPVYSYRDNVAS
TQNSTPNPDDIPALTLSSSSHPSMAGVTIALNQGEAHTESHHQHEIPHSQKAPLPVLDVP
VIADKDKTLDQTTLVTLLPTSDQQLKDQEPRLSEKRVHSLPILSYVQKVDAWKANQSSSR
SIHDSLSLQGFDGVHPKRKEQDSVSEATKQQSQQHSNKTSSGFSANSSTAPTQTGNGVLP
CADVEVAVGAVGSTSPSPFTHSCSHSSNGTVITPIQHDELKQNQNQPPLTHTVAFSRGFN
STAAELSLSPSETNSQRPADDLGTGTLKSPALLNVDQYSGINVNNNMSNTIPNFQASIGA
ASSVVSLELDNYAPYWTSRPGSPRRPPEFNIEDRIPLYLHNLGIDQSPSTILNPFTQRGP
IREPEYSPTDLCTIKGSVGTPTKSIQPSDGDSFQKEAFSSSSVLSADSSASLTQLFIQQS
LQQPTRPASSGSIRMDHFQTGILPEPLSQSHSVLHAADSSNREGSYGLPTQLSLQSAAGT
SESIKEGDSFLVGSGTLQEIRRLLGHADSLVSEHSSEASFHGSHCYSESDASFLSLRQKT
QPYHDDSFLSVDEKISLVLACSSSDSALKESSSSSSAPLELSTNSDHVSKGPTAPSLRRE
EVPKSRDICVAPRRAEPEGCSAADPDRVGPVSQSITQGNASSTSDCQQQSQDHTENAGII
LSEIRPTHSQTEAEMGVLSNGSSEHSLASRVAKLLQSESSVSVVTSRSSTADSDESQARE
WIMMKVSSAKCESLDLNAEDRKRIEEIKRELLLYTKHAKSSSDSESSTQASVGTVPQPAV
GFAAVHSAEDHLSEQLQRVCQIPLHTPPEDRVSQVGIKEGCNPEHTPSPQTASQCLHTHN
SHTSHNDNGPTKNEGGKGIMGKEKEVRDEDEHLDSEPLVIRGKREFPTGLESGLALGHKP
HFTNSHFTPAVTVTLQQNTTQSPANTSSSYPELLTGSHTHQSESLNTSRGVSILVSSTNE
EQQVSVSSETNLSKDRNAHKDQNIGMLNGYSQMSSSSPQDFTSAQRLAGPSRPLLVTTAT
ASLLPYKPHGSSELFYMPQIFPELSPNHSDTTVESSHPGSDDAVPPQFTPEVLGSRELLD
NSVTPKHKEGIYSKRPKMKRESTISGKGFHNRKGNTGLLYQHTAFSKTAVLEKEQVDEQT
EEGKAFIPLHMEANYSTTELDPNHRVQKHNMGKETICSLTKATREKKQNINAQDLSAEID
SSLDQLWHRFNEQFIFQETKTTNNLEISLLERLERLSRLLQGSSQLHTPSPANSRVEKDK
SRTREHEPRRTQGTDTTKNRKEKERNEVRGILKTAWDKNKSFSNKQILVEKKQQGKDYCF
PEESVKSDSVSVDTSSSQSTIDTHRLIKAFGVHRVSSGREGVEGSQPPKPNDGLLKLYNH
IKKQKRGHGKGRSENHLVSVATEISNTDDSMASETLSSSSTCTLPSQCDTGRTTSCKRAK
VKLVSRSIQAGDLEIVVNGTRKDTRDVGTTFPSPGSARVPRTSSADCSEVKDSMSALKAS
SAVHVQPVLRKQAPNKLPSYPNGLSWFVSADELKWDARKENNPQTDAGKSEGHAWFEPYT
RVQPWREPLRERHIQVERENSPEHKTHAENDSGSKPSSLVRLSLQEVLELRRPEFVSRSR
ERMKRLCLLAEERKMQAIFNKEREELFNPSAVQQPKAAPAPPPLPSKRVIPVNEMIQRSK
RIYSQLPEVQKRKEEERRKAEYNTYRLNAQLFNKKITNRVLGKRAPWQ
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttaggagaaggtgaagatggggaaattgttaacagagagattgagtcatgg
caccaactccccattgaagaggatcctagtcagtttctgggacaaacatcaggtttgctg
gaagctgatggtatacaagggatcacacttaactctgaaggagaaatggctaccatgggt
gactcaaatgtgcagccagcagccaacagatttgaatttttacagctagaattgcaggat
agctgtttgtcgcctgcactgactctaattcctcagggaaaggcctttttaccttcggag
ttcaccctcctccatcagacagatttagagtttgtccctttaagggggtcacctgatctg
tccattgcttctgagaggcgctctcagatgtctcgcctagatgaggatgtagagtccaac
ctcacacacagatcccatgaacaggcatcactatcacagcatcaattggggacaatgtct
gcgattttagaggatgctaatagctactgctcattatcacagcacagcctgtcacctggt
agcaattaccaggcaacccagattcatgatgaggaacacaatagtggcctgttgaataat
gatgaagtgcagaaggagggaaaggaacaaactgatactgatttggatggaagaggaaat
tcatgtggtcagaagcttctggaaaaagatcttggcgtagccagtagcagaatctcctct
tccactgaaacggttctcagtcagacagatgttgtcctacgatcaacagacggccctgaa
ggccagaataaacattctgctctttcccagaagcaggatgctgcatgtacctctataaag
gaacacgagttcagaccatctcagagcagagagcagccacaaggtggctcttcatccttg
ttatcacaaagaagaactatgggtagaggcagtttgtcactttccactcgtttatctgct
atctcaaatattacagttcggtccacaattaagcacagtgagtcctcattagctgcacca
gaaggtggaaatcaaactgagaacaaaaacactccaattggacagaatgtccctctggtc
agtgaaggtggtgggctgcagagagcactctggagctcaggcagcaataaagcagcagat
ggttcctttttgacctctcagcctgtgtatcagtccacgcctgcagtgctccttggtaga
ggagcattagccgcagccagactctcccccgtatattcttatcgagacaatgtggcatca
acccaaaacagcactcctaatccagacgacattccagcattaaccctaagttcctcaagc
catccaagcatggctggagttacaatagctttaaaccaaggtgaggctcatacagagtca
caccatcaacatgagatacctcatagccaaaaagcccctttgccagtattagatgtgcct
gtcattgctgataaagacaaaacacttgatcaaactaccttagtcacacttctgcctaca
tctgaccaacaacttaaagatcaggagcctaggctgtctgaaaaaagagtgcattctcta
cccatccttagttatgtgcagaaggttgatgcttggaaagccaaccagagttccagcagg
tcaatacatgacagtttgtctctgcaagggtttgatggtgtacatccaaaaaggaaagaa
caagactctgtttctgaggcaacaaaacaacaaagtcagcaacattccaataagacatct
tcaggatttagtgccaatagcagcactgcacccactcagacaggtaatggtgtgctgcca
tgtgcagatgtggaagtggcagtaggagctgtaggatcaacatcaccatcaccatttact
cactcctgttcccactcctctaatggaacagtcatcacccccatccagcatgatgaattg
aaacaaaaccaaaatcagcctcctcttacacacactgttgccttctctcgaggcttcaac
tccactgcagctgaattgtccctgtcaccaagtgaaacaaatagccagaggccagctgat
gacttaggaactggaactttaaagtcccctgctttgcttaatgtagatcagtacagtggc
ataaatgtaaataacaacatgagcaacacaattcccaattttcaggcatcaataggtgca
gcttcctctgttgtaagtcttgaattggacaactatgcaccttattggacctctagacct
gggtctccccgacggccccctgagtttaacatcgaagacagaatccctctctaccttcac
aatttggggattgatcagtcaccgtcaacaatcttgaatccctttacacagcgggggccc
atcagagaacctgaatattctcctactgatttatgtaccattaaaggctcagtgggaacg
cccacaaagagcatacagccatctgatggtgacagttttcagaaggaggcattctcaagt
tcaagtgtgctttctgcagattccagtgcctctttaacacagttatttattcaacagtcc
cttcagcagccaaccagaccagctagttcaggcagtataagaatggaccacttccagaca
ggcattcttcctgagccccttagtcaatcacacagtgttctccatgcagctgacagttca
aatcgagagggcagttatggactgccaactcagttgagcctgcagtctgctgctgggacc
tcggagagtattaaagaaggggactcatttctagtgggttctggaaccctgcaagagatc
aggcgattacttggtcatgcagatagcctggtgtctgaacattcctcagaagcctccttc
catggctcacactgttactcagagagcgatgcctcttttttgtcactcaggcagaaaaca
caaccatatcatgatgactcgtttttgtcagttgatgaaaagatttctttggtactagct
tgctcatcttcagactctgccctgaaggagagctcctcatcttcatctgcgcctctagag
ctgtccacaaattctgatcatgtgagcaaagggcctacagcaccctctctgcgcagggag
gaagttccaaagtcacgtgatatttgtgtggctccaaggagagcagagcctgagggatgc
agtgcagcagaccctgacagggtaggccctgtgagccagtcgattacacaggggaatgct
tcttcaacatcagattgccagcagcaaagtcaggaccatacagagaatgctggcataatt
ttgtctgagataagacccacccacagtcaaacagaggcagaaatgggtgttttaagtaat
ggcagcagtgagcattcactggcttctagggttgctaagcttctgcagagcgagtcgtct
gtctctgtggttacaagccgctcaagtactgctgattccgatgagagccaagctagagag
tggatcatgatgaaggtttctagtgccaagtgtgaatccttagaccttaatgcagaggac
agaaagagaattgaggaaattaaaagagagctcctgctgtatacgaaacacgccaagtcg
agctcagattcagaaagcagtacacaggctagtgttggcactgttcctcagcctgctgta
ggctttgcagcagtgcacagtgcagaagaccatctctctgagcagctgcagagagtctgt
cagattccactgcacacaccaccagaggacagagtaagtcaggttggcatcaaggaaggg
tgtaaccctgagcacacaccatcccctcagacagcgagtcaatgtctgcacacacacaac
agccatacttcacacaatgacaatggaccaacaaagaatgaagggggaaagggtatcatg
ggaaaggaaaaagaggtgagagatgaagatgaacacctggacagtgagccattagtcatc
agaggaaaacgagagttccctacaggcttggaatcaggtttagcccttggtcataaacct
cacttcaccaatagccacttcacacctgcagtgacagtgacattacagcaaaacaccacc
caaagtcctgccaatacttcctccagctacccagaactgctgactggatcgcacacccat
cagtcagaaagtttgaatacctcaagaggagtctcaatcctagtctccagcacaaatgaa
gaacagcaagtgtctgtatccagtgagaccaacttaagtaaagacagaaacgcacacaag
gatcagaacataggaatgctcaatggatattcacagatgagctccagttctccacaagac
tttacctctgcccaaagactggctggaccaagtcgacctttattagttacaactgctact
gcaagtttattgccatacaaacctcatggtagttcagagctcttctatatgccacagatt
ttccctgaactttcccctaaccactctgataccacagtggagagctctcatccaggatct
gatgacgctgtaccccctcaatttacccctgaggttttgggatccagagagctcttggac
aacagcgttacaccgaaacataaggagggcatttacagcaagaggcccaaaatgaaaaga
gaatccactatatctggaaaaggctttcataaccgaaaaggaaatactggtcttctttat
cagcatactgcgtttagtaagactgctgtccttgaaaaggagcaggttgatgagcagact
gaggagggaaaagcatttatccccctgcatatggaggcaaactacagcacaactgaacta
gatcctaaccacagagtacaaaagcataacatgggaaaggaaactatatgttcgcttact
aaggccacaagggagaagaaacagaacataaatgctcaggatctcagtgcagagattgac
agctctctggaccagttgtggcatcgtttcaatgagcaattcatttttcaggagactaaa
accactaacaacctagaaatatctctgctagagagactggaaagattgtcccgccttcta
caggggtcctctcagcttcacacaccttcaccggcaaacagtagagtggagaaagacaag
agtaggacaagagaacatgagccacggagaacacagggaacagacacaaccaaaaataga
aaagaaaaagaaagaaatgaagtgagaggtattctaaaaacagcatgggataaaaataaa
tcttttagtaacaaacaaatattagtagagaagaaacagcaaggaaaagactattgcttt
cctgaagagagtgtcaagtccgatagtgtttctgtggacactagtagcagccagtctacc
atcgacacacaccgcttgatcaaagctttcggagtacatagagttagcagtgggagagaa
ggggtggaaggaagtcagccgccaaagcccaatgatggcctgctgaaactttataaccac
attaagaagcagaaaagaggacatggaaaaggtagatctgaaaatcaccttgtttctgtt
gccacagaaataagcaacacagatgactccatggcctcagaaacattatcatcctcaagc
acttgtaccctaccctcccaatgtgacactggacgtactactagttgtaagagagcaaaa
gtcaaactggtcagcagaagcatacaagcaggtgatttggagattgttgtaaatggcacc
cgcaaagacacacgggatgttggcactaccttcccatctccaggtagtgccagagtcccc
aggacatcttcagcagactgcagtgaggtaaaggacagtatgtctgctctcaaggcttcc
agtgctgttcacgtccaaccagtgctgagaaaacaggcccccaacaaactccccagttac
ccaaatggtttatcatggtttgtttctgctgatgaactgaaatgggatgcacggaaggag
aacaacccccagacagatgcagggaagtctgaaggccatgcctggttcgagccatacact
agggtgcagccatggagagagccgcttagagaacgacacattcaagtagaaagagagaat
tcccctgagcataaaacacatgcagagaatgattccggtagcaaaccctcttccctagtc
cgtctttctctgcaggaggtgctggagttgcgtcgaccagagtttgtgtcccgttcacgg
gagcggatgaaaaggctgtgcctgctagcggaggagagaaaaatgcaagccatctttaac
aaagaaagagaagagcttttcaacccttcagcagtacagcagccaaaagcagcaccagct
cctccacctcttccttctaagcgagttattcctgtaaatgagatgatccagagatccaag
cggatctattctcaactcccagaggttcagaagaggaaggaggaagaaaggagaaaagca
gagtataacacttatcgccttaatgctcagctatttaacaagaaaattaccaatcgtgtg
ctgggaaaaagagcaccttggcagtag
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