Tachysurus vachellii: 132847248
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Entry
132847248 CDS
T09596
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
132847248 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132847248 (kcnma1a)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
132847248 (kcnma1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
BNR_3
Motif
Other DBs
NCBI-GeneID:
132847248
NCBI-ProteinID:
XP_060728342
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All DBs
Position
6:complement(13252465..13381039)
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AA seq
1257 aa
AA seq
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MLAGADRNLSRGGDGISRMTNNNNYNKNSDSSVSISRMDVIIPFSADVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNVKNKEAQKVNNGQADGPLKSQDEKDEA
PASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFYK
DFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGL
RFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENF
QNSQPLSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELI
GNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLE
LEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVIS
IKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLSTM
LANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLLI
AIEYKSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAYFYCKACHDDITDPKRIK
KCGCKRPKMSVYKRMKLACCFDCGRSERDCSCMAGSVHSNMDSLQRAFPLSSVSVHDCST
SLRAFDDEHPSTLSPKKKQRNGGMRNSPNCSPKVMRHDPLLIPGNEQIENMDANVKRYDS
TGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHY
HELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQN
NIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLVRQA
SVTTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAISVLDSLMSATY
FNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFA
DLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSAPSQCTKRYVITNPPYEFELVPTDL
IFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPTTNRPNRSSKTRESREKHNAT
RMNRMSQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgctagctggggcagatcgcaacctttcccgcggcggcgacggcatctctagaatgact
aataataacaactacaataaaaactcggactcttctgtctctatatccaggatggatgtg
atcatcccgttctccgcagacgtgccgtgcgataacaatggccagcgcatgtggtgggct
ttcctcgcctcgtccatggtgacgttcttcgggggtctctttatcatcctcctgtggagg
accctcaagtacctgtggactgtctgctgtcattgtaacgtcaaaaacaaggaggcccag
aaagtgaataacgggcaggcagatgggccactgaagagccaggatgagaaggacgaggct
ccagctagtgaggtgggctggatgacctctgtgaaagactgggccggtgtcatgatctca
gcacagactcttacaggcagagtactggtcgtgttagtctttgctctcagtattggagcc
cttggaatatacttcatagactcgtctgaccctatagagtcctgtcagaacttctataaa
gacttcacattacagatcgacatggccttcaatgtgttcttcttactctactttggtctg
cgatttattgcagcaaatgacaagctttggttctggctggaggtgaactctgtggtggat
ttctttactgtgccaccagtgtttgtgtcggtgtatcttaacagaagctggctgggtctg
agatttctaagagccttgagactgatacagttctcagaaattttacagtttttgaatatc
ttaaagacaagtaattccatcaagctggtgaacctgtgttccatcttcataagcacatgg
ctcacagctgcaggattcattcatctggtggaaaactcaggggatccttgggaaaacttc
caaaattctcaaccactttcatattgggaatgtgtgtacttactcatggtcactatgtcc
acggtgggatacggggacgtctgtgcgaaaaccacccttggccgacttttcatggtcttc
ttcattcttggcggtttggccatgtttgccagctacgtccctgaaatcatagagttaata
ggaaaccgcaagaaatatggtggttcctatagtgcggttaatggcagaaagcatattgtg
gtctgtggtcatatcacacttgaaagtgtatccaacttccttaaagacttcctacacaag
gacagggatgatgtcaatgtagaaattgtttttcttcataatatttcccctaatcttgag
ctggaagccttgttcaaacgtcacttcactcaggtggaattctaccaaggatctgttctt
aacccacatgatctagctagagtcaagatcgagtcagcggacgcatgcttaattctcgcc
aacaaatactgtgcagacccagatgctgaagatgcatcaaacattatgagagttatatcc
atcaagaattaccatccaaagataagaataatcactcaaatgttacagtatcacaacaag
gcccatctgctaaacattcccagctggaactggaaggagggcgatgatgcgatctgcctg
gccgagctgaaggcaggctttatagcccagagctgcctggcacaaggcctgtccaccatg
cttgccaacctcttctccatgaggtcatacatcaagattgaagaggacacatggcagaag
tattatttggagggagtggctaatgagatgtacactgagtacttgtccagtgcctttgtg
ggcctttcttttcctacagtttgtgagctatgttatgtgaagctcaaattgttgttgatt
gctattgagtacaagtccgagcagagggaaagcagtatcctgatcaaccctgggaaccat
gtaaagatgcaggagggaaccttgggattctttattgccagtgatgccaaagaggtcaaa
agagcatatttttactgcaaagcttgtcatgatgacatcacagatcccaaaaggatcaaa
aagtgtggctgcaagagacccaagatgtccgtctacaagcgaatgaaactggcatgttgt
tttgattgcgggcgctctgagcgcgactgctcgtgcatggcaggcagtgtacatagtaac
atggacagccttcagagggccttcccactttcttctgtctctgttcatgattgctcaacc
agtttacgtgcctttgacgacgagcatccatcaacgctgtcacccaaaaagaagcagcgc
aatggaggcatgcgaaattcacccaactgctcacccaaagtgatgagacatgacccttta
cttattccaggaaacgagcagattgagaatatggacgctaatgtgaagagatacgactcc
actggaatgtttcactggtgcccttccaaagaaattgagaaagtcattctgacaaggagt
gaggcttccatgacggttctaagtggacatgtcgtggtctgtatattcggagatgtcact
tctgctttagtggggctgcgaaacttggttatgcctttaagagcaagtaacttccattac
catgagctgaagcacatagtgtttgtaggctcactggagtatctgaggagagaatgggaa
acccttcataacttccccaaggtctccatcttacctggcacaccattaagtcgagctgat
ttaagggctgtaaacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaac
aatatcgacgatgcttcactgcaggataaggaatgcatcttggcatcactcaacatcaaa
tctatgcagtttgatgacagcattggggtcctgcaggctaattcccaaggttttacacct
cctggaatggatagatcgtctccagacaacagtcctgtgcatgggttggttcgccaggcg
tctgtcactactggctccaacatcccaatcataactgaactagtgaatgattcaaatgtt
cagttcctggaccaagatgatgatgatgacccggatacagagctgtatctgacccaaccc
tttgcctgtgggacagcttttgccatcagtgtgctcgactctcttatgagcgctacgtac
ttcaacgataatatcctgacgctgatccggacgctggtgacaggaggggctacgccggag
cttgaggcactgttggccgaggagaatgctttgcgtggaggatatagcacgccacagacg
ctagctaacagggacaggtgtcgcgtggcacagctcgccctctacgatggcccttttgca
gacttgggggatggtggctgttatggggacttgttttgtaaagcattaaaaacctacaac
atgctgtgctttggaatctatagattaagagatgcacacctaagtgcaccgagccaatgc
acaaaaaggtatgtcatcaccaacccaccctatgagttcgagcttgttcccacagacctg
atcttctgcctgatgcagtttgaccacaacgcaggtcagtcgcgaaccagcctgtcccat
tcctcccattcctcccactcatccagcaagaagagctcctcagttcactcaatccctacc
accaaccggcccaaccgcagcagcaagacccgcgaaagccgcgaaaaacacaatgcaaca
aggatgaatagaatgagccaagaaaagaaatggtttacagatgaaccagaaaatgcctac
ccaaggaacattcaaatcaagcccatgagcactcacatggccaatcaagtcaatcagtac
aaatccactagcagcctgattccaccgatcagagaagttgaagatgaatgctga
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integrated database retrieval system
