Tachysurus vachellii: 132847310
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Entry
132847310 CDS
T09596
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
tvc
Tachysurus vachellii
Pathway
tvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132847310 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132847310 (ercc6)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132847310 (ercc6)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
132847310 (ercc6)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
132847310 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SesA
Motif
Other DBs
NCBI-GeneID:
132847310
NCBI-ProteinID:
XP_060728467
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All DBs
Position
6:complement(15311692..15328817)
Genome browser
AA seq
1397 aa
AA seq
DB search
MPIDNNEDPDCPEWSSPVSALTPGGKEDNGSSRASSGLSIPESSQEEPAAAVCPGNAGPE
NSRKSQLLLHINRQEIQAVAQNDQAAELQGLGVDVYDQDVLEQGVLQQVDRAFQEAKQAT
ARADAEKEYESVLDDVRSCTSALKHINKILEQLTPYAASSKDISRKIDSVKRQKENKEKQ
LKKIRAKQRRLQAVLSGEDVQKLEAELLTEDDTEAGPSTQGSMLMPAQETEWEELIRTGQ
MTPFGSRVPQKQEKKEPRKLMLSENSGFDKYLADQARIAERRKKPTPKKKRKVSRSSTTE
VKKNTSSAKQEKKLQKRMRKLQRTALKAHPKARPKTEKEFPQTRGKGFREDGSNSSGSEY
VPSDELMDPEEPERDDEFWQDEKEEYELKPYKKKKENKSMKSKKEDESDEYLPSSSEDDD
SDRKVKVKKCKDDGDIECYRKRIRNWKRQRLQVKEQKRQAGEDESDESDAEFDEGFKVPG
FLWKKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVIAFLAGLSYSKLKTRGSNY
RYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFNNKKEELIPEIVASHGIL
ITSYSYVRIMQDYIQKYDWHYIILDEGHKIRNPNAGVTVASKQFRTPHRFILSGSPMQNN
LKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAYKCACVLRDTINPY
LLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQDFLDSKEVYQILNGDMQIFSGLIV
LRKICNHPDLFTGGPRMLRAIPADQLTEEEHFGYWKRSGKLIVVESLLRLWFKQGHRVLL
FTQSRQMLEILEVFVRENGYTYLKMDGTTAIASRQPLIAQYNESKDIFIFLLTTKVGGLG
INLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQ
FLTNRVLKDPKQRRFFKSNDIYELFTLSNPDGSQGTETSAIFAGTGSDVQIPKRHKAPYP
SPSKLQQTSSKPEKIPSSSLCKENALPETFHRSTPTLNGLSNSNANKESDSLDVTSTSPS
NTPQKHREKKKHCDVTDVASQPSDKNNHKHKKRKNREDARFEGHRISHLVKKRRYKREDS
EDQKETKDEQKNDDYVLTKLFKKSGIHSVMKHDTIMEASNPDYVLVEAEANRVAKDALKA
LKVSRHRCRLPFSGYAPATPAPVKKRFGQKKNSLLNQALKTTQKTGEKCKDAELIKKVSI
KKLGSAAHFSGEGVDEKALSSSLSSSSLLARMRARNHVSLPQSQDDDDDDDDNEQRVQSS
PHISPTEHDELLVDLRNFVAFQAQVDGQASTPEILEYFTPRLTSTQTPVFRELLRNICDF
HRLPGKEGIWKLKDDYR
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgcctatagacaacaatgaggacccagactgccctgaatggtccagtccagtgagtgct
ctaacaccaggagggaaagaggacaatggttccagcagggcatcgagtggcctctccatc
ccagagagcagtcaggaagagccagctgctgcagtctgccctggtaatgctggacctgaa
aactccaggaaatcacagctcctgctccatatcaaccgtcaggagatccaggctgtggct
cagaacgatcaagcagccgagctccagggtttgggagtggacgtgtatgatcaggatgtt
ctggagcaaggagtacttcagcaggtggaccgagcctttcaggaggccaaacaggccaca
gcgagggctgatgcagagaaagaatatgagtctgtcctggatgatgtcaggtcatgcaca
agtgctctaaaacacatcaacaagatattagagcagcttactccttatgctgcctccagc
aaggacatcagccggaaaatcgactctgtcaaaaggcaaaaggaaaacaaggagaagcag
ttaaaaaagatccgagccaagcagagacgcttacaggctgttctgagtggagaggacgtt
cagaagctcgaggcagagttattgactgaagatgacacagaggcaggcccatccacacag
ggcagcatgctcatgcctgctcaggagactgagtgggaagaactcatccgcacaggtcaa
atgaccccttttggctcacgtgtccctcaaaagcaagagaagaaggaaccacgcaagttg
atgctcagcgaaaactctggctttgacaagtaccttgccgaccaagctaggattgcagag
agaagaaagaaaccaaccccaaagaaaaagcggaaggtgtccaggagttccactacagaa
gttaaaaaaaacacatcatccgccaagcaagaaaagaaactgcagaaacggatgcggaaa
ctccaaaggactgcccttaaggctcaccccaaagcaaggcccaaaacagagaaagaattt
ccacagaccagggggaaggggttcagggaagatggctcaaacagctcgggctccgagtat
gtgcctagtgatgagctgatggatcctgaggaaccagagcgagatgatgagttctggcaa
gatgaaaaggaagaatatgaactaaagccttataagaaaaagaaagagaataaaagcatg
aagtcaaaaaaagaggatgagagtgacgaataccttcccagcagttctgaggatgatgac
tctgacagaaaagtcaaggtgaagaaatgcaaagacgacggagatatcgagtgctacagg
aagagaattaggaattggaagagacagagactccaagtgaaagagcagaagaggcaagca
ggagaggacgagtctgatgagagcgatgcagagttcgatgaaggttttaaggtgccagga
tttctctggaagaaactcttcaagtatcagcagacaggtgtcaggtggatgtgggaactg
cactgccagcaggcaggaggcattctgggagatgagatgggccttggcaaaaccatccaa
gtaatagctttcctggcaggactgagctacagcaagttaaagacacgcggctccaattac
aggtatgctggattgggacccacagtcattgtatgcccagccacagtcatgcatcagtgg
gtgaaggagttccacacctggtggcctccattccgtgtagcagttctccatgaaacgggt
tcttttaataataaaaaggaggagctcatccctgagatagtcgctagccacgggatcctc
attacatcgtactcatacgtgcgcattatgcaggattacattcagaaatatgactggcat
tacatcatcttggacgagggccataaaattaggaatccaaatgcaggcgtcactgttgca
tccaagcagttccggaccccgcatcggttcatcctctctggttcacccatgcagaataac
ctgaaggaactttggtccctctttgactttgtgttcccagggaaactaggcaccctccct
gtattcatggagcagttctcagtgccaattaccatggggggatattctaatgcctctcca
gtgcaggtgcagacagcctataaatgtgcctgtgtcttacgtgacaccatcaatccgtac
ctgctgaggaggatgaaggctgatgtaaaggccaatctctcgttaccagacaaaaatgag
caggtactgttctgtagattaaccgaagaacagcggcaagtttatcaggactttttggat
tccaaggaagtgtatcagattctgaacggagatatgcagattttctctggcttgatcgtc
ttgaggaagatttgtaaccacccagacctgttcactggtgggccacgcatgctgagagcc
atacctgcagatcaactgactgaagaggagcactttggctactggaagcgctcggggaag
ctaatagtagtggagtctctgctcaggctgtggttcaaacagggacacagagtcttgctc
tttactcagtccagacagatgctggagatcctggaggtgtttgtcagggaaaatggatac
acctatcttaaaatggatggcaccaccgccatcgcgtctaggcagccgctcatagcgcag
tacaatgagagcaaggatatatttattttccttttgacgaccaaagttggaggattaggc
atcaacctgactggtgcaaaccgagtaattatctatgatccagactggaatcctagcaca
gacactcaggcccgtgagcgtgcttggagaatagggcagaaacagcaggtgactgtttac
aggctgctcaccgctgggaccattgaagagaagatttaccacaggcaaatcttcaagcag
tttctcacaaatcgagtactcaaggatccaaaacagcgtcgttttttcaagtctaatgac
atttacgagctcttcacacttagcaatcctgacggctcccagggaactgaaaccagtgca
atatttgcaggcactggctcagatgtacagattccaaagagacacaaggcgccttatcct
tcaccatcaaaactgcaacaaacctcatcaaagccagagaaaatcccgtcgtcttcactg
tgtaaagaaaatgctttacctgagacttttcacagaagcactcctactctcaatggccta
tccaacagtaatgccaacaaggaaagtgactctttagatgttacatccacatcaccctcc
aacacgcctcagaaacacagggaaaagaaaaagcactgtgatgtgacagatgtagcaagt
cagccctcagacaaaaataatcacaagcataaaaagcgtaagaaccgagaagatgcccgg
tttgagggtcatcgaatttctcacctggtgaaaaagaggagatacaaaagagaagatagc
gaggatcagaaagagacaaaagatgagcagaagaatgatgactatgttctcaccaaactc
ttcaagaaatctgggatccatagtgttatgaaacatgacacaatcatggaggcatcaaac
ccagactatgtcttggtggaagctgaggccaatcgggttgctaaagatgcacttaaagct
ctgaaagtgtccagacatcgctgcaggctgccattcagtggatatgcaccagcaacacca
gcccctgtcaagaaaagatttggacagaagaagaactctcttctcaaccaggccttgaaa
acaacacaaaaaacaggggagaaatgcaaggatgcagagttgataaagaaagtaagcatc
aaaaaactaggatctgctgcccacttcagtggtgagggagtggatgaaaaggcactttct
agctccctctcctcctcctcactgttagccagaatgagggccaggaatcatgtaagccta
cctcagagccaagatgatgatgatgatgatgatgataacgagcaaagagtgcagtcttct
ccacatatttcccctactgagcatgatgagctgctggtggatttgaggaactttgtggct
ttccaggctcaggttgatggccaagccagcactccggagatcctggagtatttcactccg
agattaacctccacacagactccagtgttcagagaattgcttaggaatatctgtgacttc
cacaggcttccaggaaaagaggggatttggaaactcaaagatgattacagatga
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