Tachysurus vachellii: 132847472
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Entry
132847472 CDS
T09596
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03271
Virion - Rotavirus
tvc04145
Phagocytosis
tvc04510
Focal adhesion
tvc04512
ECM-receptor interaction
tvc04514
Cell adhesion molecule (CAM) interaction
tvc04517
IgSF CAM signaling
tvc04518
Integrin signaling
tvc04530
Tight junction
tvc04810
Regulation of actin cytoskeleton
tvc04820
Cytoskeleton in muscle cells
tvc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
132847472
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132847472
04514 Cell adhesion molecule (CAM) interaction
132847472
04517 IgSF CAM signaling
132847472
04518 Integrin signaling
132847472
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132847472
09144 Cellular community - eukaryotes
04510 Focal adhesion
132847472
04530 Tight junction
132847472
09142 Cell motility
04820 Cytoskeleton in muscle cells
132847472
04810 Regulation of actin cytoskeleton
132847472
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132847472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132847472
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132847472
04515 Cell adhesion molecules [BR:
tvc04515
]
132847472
04090 CD molecules [BR:
tvc04090
]
132847472
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
132847472
Exosome [BR:
tvc04147
]
Exosomal proteins
Proteins found in most exosomes
132847472
Cell adhesion molecules [BR:
tvc04515
]
Integrins
Integrin beta subunits
132847472
CD molecules [BR:
tvc04090
]
Proteins
132847472
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
132847472
NCBI-ProteinID:
XP_060728765
LinkDB
All DBs
Position
1:12285027..12306873
Genome browser
AA seq
798 aa
AA seq
DB search
MKVNVVLIAVLLGFSSFCSAQLDGNDCTKASAQSCGECIQVGEKCGWCTYEAFLKQGESK
STRCDEIDALVKKGCPMINVENPRGVVIVNENKTVTNRKKDVAEKLKPDQITQIQPQKLT
LNLRAGEPQKFSLRFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTDLMREMQTVTSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTTDQNCTSPFSYKNVLSLTENGQQFNSLVSRQQ
ISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLKDNIYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENSKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
GDEVTFDIAITTKGCPSPGKQEVIKIKPLGFNEEVVIVLNFICECECSKGGIPKSPDCHF
GNGTLECGACRCNEGRIGRVCECSKDDVRAEDLDANCRMDNGTDICSNNGDCICGTCECK
KRDNPEERYEGKFCECDNFNCDRSNNKLCGGHGQCVCRVCVCDANYTGSACDCPLDKQPC
VASNGQLCNGRGTCSCGVCKCTDPKFQGKTCEICPTCPGVCTEHKSCVQCRAFNTGELKD
KCEEKCSYFKLNKVKEKDDLPQPSSQPFLTHCKERDANDCWFFFTYSSKNDSGEVYVVER
LECPTGPDIIPIVAGLVAGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDAGEN
PIYKSAVTTVVNPKYEGK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaatgtggtgttgatagctgttctgctggggttctcctccttctgttcagct
caactagatggtaatgattgcacgaaagcttcagctcaatcctgtggtgaatgcattcag
gttggagaaaagtgtgggtggtgcacctatgaagcctttctaaagcaaggagaatccaaa
tcaacacgctgtgatgaaattgacgctctggttaagaagggctgtcctatgatcaatgtg
gaaaatcctcgaggtgtagtgattgtcaatgaaaacaaaactgtcacaaaccgtaaaaaa
gatgtggctgagaaactgaaaccagaccagatcactcagattcaacctcagaagctcaca
ctaaacctcagagcaggtgagcctcaaaaattttccctgaggtttaaaagggcagaggat
tatcccattgacctgtactatctgatggacttgagttactccatgaaagatgatttggag
aacgtaaaaaatttgggaactgacctgatgcgtgagatgcagacagtcacgtctgacttc
aggattggttttggttcatttgtggaaaagactgtgatgccatatatcagtacaactcct
gcaaagctgctgaatccatgcactactgatcagaactgcacaagccccttcagctataaa
aatgtactgagtctgactgagaatggccagcagtttaacagccttgtcagtcggcaacag
atttctggaaacctcgactcacctgagggaggctttgacgccatcatgcaagttgcagtc
tgtggggaacagattggttggagaaatgtcactcggctactagtcttttctactgatgct
ggttttcacttcgccggagacggtaaactgggtggcattgtgcttcccaatgatggaaaa
tgccacctgaaggataatatatacacaatgagtcattactatgactacccttcaatcgca
caccttgtacagaaactgagtgacaacaacattcagacaatctttgctgtaactgaggag
ttccagcctgtctataaggagcttaaaaatctcattccaaagtctgccgttggaacattg
tctgcaaactccagtaacgtgatcaaacttatcattgatgcctacaactctctttcttct
gaggtgatcctggagaacagcaagctacctgagggagtgtccatctcatacgtgtcccac
tgcaagaatggagttagtgaaacaggagacaatggaagaaagtgctcaaacatctctatc
ggcgatgaggtgacctttgacatagccatcaccactaagggctgcccatcacctggtaaa
caagaggtaataaagatcaagcctctaggattcaacgaggaggtcgtgatcgttctaaac
ttcatctgtgagtgtgaatgttccaaaggagggatccccaaaagtccagactgtcacttt
ggcaatggaactctcgagtgtggagcatgcagatgcaacgaggggcgaattggaagggtt
tgtgaatgtagcaaagatgatgtcagggcagaggaccttgatgcaaactgccgcatggac
aatgggacagatatctgtagcaacaacggggactgtatctgtggaacatgtgaatgcaag
aagcgagataacccagaggagcgctatgaagggaagttctgtgaatgtgacaactttaac
tgtgaccgatccaacaacaagctatgcggaggtcatggtcagtgtgtctgcagagtgtgt
gtatgtgatgcaaactacacaggcagtgcatgtgactgcccactggacaagcagccctgt
gtggccagtaatgggcagctctgtaacggtcgtggcacctgttcctgtggagtgtgtaaa
tgcaccgacccaaagttccagggtaaaacctgtgagatttgccccacttgccctggagtc
tgcacagaacacaaatcttgtgttcagtgccgtgcatttaatactggagagttgaaagat
aaatgtgaagagaaatgcagttactttaaactaaacaaggtgaaggaaaaggatgatctt
cctcagccaagcagccagcccttcctcactcactgcaaagagcgtgatgcgaatgactgc
tggttcttcttcacttattccagcaagaatgacagtggtgaagtctatgttgtggagagg
ctggaatgccctaccggtcctgacattatcccaatcgtagcgggtttggttgctggcatc
gttcttattggtctggccctgcttttcatctggaagctgctcatgattattcatgaccgc
agagagtttgcaaagtttgagaaggagaagatgaatgccaagtgggatgcgggtgagaat
cccatctacaagagtgcagtgactacagtggtcaatcccaagtatgagggaaagtga
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integrated database retrieval system