KEGG   Tachysurus vachellii: 132847472
Entry
132847472         CDS       T09596                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
tvc  Tachysurus vachellii
Pathway
tvc03271  Virion - Rotavirus
tvc04145  Phagocytosis
tvc04510  Focal adhesion
tvc04512  ECM-receptor interaction
tvc04514  Cell adhesion molecule (CAM) interaction
tvc04517  IgSF CAM signaling
tvc04518  Integrin signaling
tvc04530  Tight junction
tvc04810  Regulation of actin cytoskeleton
tvc04820  Cytoskeleton in muscle cells
tvc05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    132847472
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132847472
   04514 Cell adhesion molecule (CAM) interaction
    132847472
   04517 IgSF CAM signaling
    132847472
   04518 Integrin signaling
    132847472
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    132847472
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132847472
   04530 Tight junction
    132847472
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132847472
   04810 Regulation of actin cytoskeleton
    132847472
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    132847472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tvc04131]
    132847472
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvc04147]
    132847472
   04515 Cell adhesion molecules [BR:tvc04515]
    132847472
   04090 CD molecules [BR:tvc04090]
    132847472
Membrane trafficking [BR:tvc04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    132847472
Exosome [BR:tvc04147]
 Exosomal proteins
  Proteins found in most exosomes
   132847472
Cell adhesion molecules [BR:tvc04515]
 Integrins
  Integrin beta subunits
   132847472
CD molecules [BR:tvc04090]
 Proteins
  132847472
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 132847472
NCBI-ProteinID: XP_060728765
LinkDB
Position
1:12285027..12306873
AA seq 798 aa
MKVNVVLIAVLLGFSSFCSAQLDGNDCTKASAQSCGECIQVGEKCGWCTYEAFLKQGESK
STRCDEIDALVKKGCPMINVENPRGVVIVNENKTVTNRKKDVAEKLKPDQITQIQPQKLT
LNLRAGEPQKFSLRFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTDLMREMQTVTSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTTDQNCTSPFSYKNVLSLTENGQQFNSLVSRQQ
ISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLKDNIYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENSKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
GDEVTFDIAITTKGCPSPGKQEVIKIKPLGFNEEVVIVLNFICECECSKGGIPKSPDCHF
GNGTLECGACRCNEGRIGRVCECSKDDVRAEDLDANCRMDNGTDICSNNGDCICGTCECK
KRDNPEERYEGKFCECDNFNCDRSNNKLCGGHGQCVCRVCVCDANYTGSACDCPLDKQPC
VASNGQLCNGRGTCSCGVCKCTDPKFQGKTCEICPTCPGVCTEHKSCVQCRAFNTGELKD
KCEEKCSYFKLNKVKEKDDLPQPSSQPFLTHCKERDANDCWFFFTYSSKNDSGEVYVVER
LECPTGPDIIPIVAGLVAGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDAGEN
PIYKSAVTTVVNPKYEGK
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaaagtgaatgtggtgttgatagctgttctgctggggttctcctccttctgttcagct
caactagatggtaatgattgcacgaaagcttcagctcaatcctgtggtgaatgcattcag
gttggagaaaagtgtgggtggtgcacctatgaagcctttctaaagcaaggagaatccaaa
tcaacacgctgtgatgaaattgacgctctggttaagaagggctgtcctatgatcaatgtg
gaaaatcctcgaggtgtagtgattgtcaatgaaaacaaaactgtcacaaaccgtaaaaaa
gatgtggctgagaaactgaaaccagaccagatcactcagattcaacctcagaagctcaca
ctaaacctcagagcaggtgagcctcaaaaattttccctgaggtttaaaagggcagaggat
tatcccattgacctgtactatctgatggacttgagttactccatgaaagatgatttggag
aacgtaaaaaatttgggaactgacctgatgcgtgagatgcagacagtcacgtctgacttc
aggattggttttggttcatttgtggaaaagactgtgatgccatatatcagtacaactcct
gcaaagctgctgaatccatgcactactgatcagaactgcacaagccccttcagctataaa
aatgtactgagtctgactgagaatggccagcagtttaacagccttgtcagtcggcaacag
atttctggaaacctcgactcacctgagggaggctttgacgccatcatgcaagttgcagtc
tgtggggaacagattggttggagaaatgtcactcggctactagtcttttctactgatgct
ggttttcacttcgccggagacggtaaactgggtggcattgtgcttcccaatgatggaaaa
tgccacctgaaggataatatatacacaatgagtcattactatgactacccttcaatcgca
caccttgtacagaaactgagtgacaacaacattcagacaatctttgctgtaactgaggag
ttccagcctgtctataaggagcttaaaaatctcattccaaagtctgccgttggaacattg
tctgcaaactccagtaacgtgatcaaacttatcattgatgcctacaactctctttcttct
gaggtgatcctggagaacagcaagctacctgagggagtgtccatctcatacgtgtcccac
tgcaagaatggagttagtgaaacaggagacaatggaagaaagtgctcaaacatctctatc
ggcgatgaggtgacctttgacatagccatcaccactaagggctgcccatcacctggtaaa
caagaggtaataaagatcaagcctctaggattcaacgaggaggtcgtgatcgttctaaac
ttcatctgtgagtgtgaatgttccaaaggagggatccccaaaagtccagactgtcacttt
ggcaatggaactctcgagtgtggagcatgcagatgcaacgaggggcgaattggaagggtt
tgtgaatgtagcaaagatgatgtcagggcagaggaccttgatgcaaactgccgcatggac
aatgggacagatatctgtagcaacaacggggactgtatctgtggaacatgtgaatgcaag
aagcgagataacccagaggagcgctatgaagggaagttctgtgaatgtgacaactttaac
tgtgaccgatccaacaacaagctatgcggaggtcatggtcagtgtgtctgcagagtgtgt
gtatgtgatgcaaactacacaggcagtgcatgtgactgcccactggacaagcagccctgt
gtggccagtaatgggcagctctgtaacggtcgtggcacctgttcctgtggagtgtgtaaa
tgcaccgacccaaagttccagggtaaaacctgtgagatttgccccacttgccctggagtc
tgcacagaacacaaatcttgtgttcagtgccgtgcatttaatactggagagttgaaagat
aaatgtgaagagaaatgcagttactttaaactaaacaaggtgaaggaaaaggatgatctt
cctcagccaagcagccagcccttcctcactcactgcaaagagcgtgatgcgaatgactgc
tggttcttcttcacttattccagcaagaatgacagtggtgaagtctatgttgtggagagg
ctggaatgccctaccggtcctgacattatcccaatcgtagcgggtttggttgctggcatc
gttcttattggtctggccctgcttttcatctggaagctgctcatgattattcatgaccgc
agagagtttgcaaagtttgagaaggagaagatgaatgccaagtgggatgcgggtgagaat
cccatctacaagagtgcagtgactacagtggtcaatcccaagtatgagggaaagtga

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