Tachysurus vachellii: 132847481
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Entry
132847481 CDS
T09596
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132847481 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132847481 (polr1b)
Enzymes [BR:
tvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132847481 (polr1b)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132847481 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
132847481
NCBI-ProteinID:
XP_060728776
LinkDB
All DBs
Position
6:20353828..20362189
Genome browser
AA seq
1133 aa
AA seq
DB search
MDHAQKWSVLPTAPSLKHLTEAGFGLPKEKQHEAVQDLVKAHIESFDQAVTDGLCRVVQA
IPPLEFLYKGDRISLSFVEAAIHKPVVGKGGICKDLHVYPAECRGRRCTYRGKLVADVSW
SVNGIPKGIIKQSLGQVPMMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIALSRPKFKSRGQGYTQYAISVHCVREQHTSINMNLHYLDNGTVMLNFIY
QKELFFLPLGFALKALVDFSDYQIYQELIKGREENSFFKSCVSEMLRLVMEEGCTTRGKV
LDYLGERFRVKLNLPEWYTHEQCARFLMDECLCIHLKSDTEKFYMLCLMTRKLFAFAKQE
CMEENPDSLMCQEVLTPGQLFLMFLKEKMMGWMVSVKLALDKRGQRFGALTSDNLAKIFN
MGTDLTKAFEYLLATGNLVSKTGLGMLQASGLCVVADKLNFIRYLSHFRCVHRGAAFAKM
RTTAVRKLLPESWGFLCPVHTPDGAPCGLMNHLTTHCEIVAPVHPTTTIPALLCTLGVTP
VDGTPGQPYSCCYPVILDGTMIGWVEKDLAPALVDSLRRFKVLKEKKIPPWTEIVLVPQT
GKASLYPSLYLFTTPCRMVRPVRNLALGKEELIGTFEQIYLNVGIFEDEIEHGVTTHQEL
FPHSMLSVVASFIPFSDHNQSPRNMYQCQMGKQTMGFPLHSYQDRSDNKLYRLQTPQSPL
VRPLMYDHYNVDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTEIVDL
SLKAKGEDSMVFGIKPGDPKVSGRLDADGLPPIGSKLNYGDPFYSYINLNTGQSYVTFYK
SQESCVVDNIKACSNDAGTGRFKRVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDM
PFSESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAAMHGLCHDATPFTFSEKNSALEHF
GTLLKAAGYNYYGTERLYSGLSGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGARDKVT
NQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSIAQVCVRCGSLLSPLLE
KPPPHWSATRHRNTICSLCKKSDAIDTVAVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgctcagaagtggagcgttttaccaactgctccgagtttaaaacacctcaca
gaggcaggatttgggcttcctaaagagaaacagcacgaagctgtacaggatttagtgaaa
gcgcacatcgagtcgtttgaccaagcggttactgatggactgtgccgagtggttcaggcc
attcctccactggagttcctgtacaagggggacagaatcagcctgtcatttgtggaagct
gctatacacaagcccgttgttggcaaaggcgggatctgcaaggatctccatgtgtatcct
gctgagtgtagaggaaggaggtgcacgtacagaggaaaattagtggcggatgtcagttgg
tcagtcaatgggatccctaaaggaattattaagcaatcgttaggacaggtacccatgatg
gtgaaatccaaactgtgtaatctccatggactctcgcctaaagagctaatagagcaccat
gaagaagcagaggaaatgggaggctactttatagtgaacggcatcgagaaggtgatccgc
atgcttatcatgccaaggaggaactaccccatcgccttgtcaagaccaaagtttaaaagt
agaggacaaggctacactcagtacgcaatttcagtgcattgcgtgagagaacaacataca
tccattaacatgaaccttcactacctggataatggaacggtcatgctgaacttcatttat
cagaaagagctgtttttccttcctctgggcttcgctcttaaggccttagtggacttctca
gactaccagatctaccaggagctaataaagggcagagaggagaactccttctttaagagc
tgtgtgtctgagatgctgcgcttggtgatggaagagggctgtactaccagagggaaggtg
cttgactatctaggagaacgctttcgggtcaagctgaacttgcctgagtggtacacacat
gagcagtgtgctagatttctcatggacgagtgtttgtgcattcacctgaagtctgacact
gagaagttctacatgctttgtctgatgacacgaaagttgtttgcttttgccaaacaggag
tgtatggaggagaatccagacagtctgatgtgtcaggaggtcctcacacctgggcagctt
tttctcatgttcctgaaggagaaaatgatgggttggatggtttctgtgaaactggccttg
gataaaagaggccagcgattcggagcattgacctcagataacctggctaaaattttcaac
atgggcactgacctcaccaaagcctttgagtacctgctggctacaggaaaccttgtctcc
aagaccggtctgggtatgctgcaggccagtggtctgtgtgtggtggctgacaagctcaac
ttcattcgatatttgtcccacttccggtgtgtgcacagaggagcagccttcgccaagatg
aggaccacagcagtgagaaagcttttacctgagtcttggggctttctgtgtcctgtgcac
acacctgatggagcaccatgtggtctaatgaaccacctaacaacccactgtgagattgtg
gctcctgttcaccccactactacaatccctgccttgctctgcacactaggtgttactcca
gtggatggaactcctggtcagccgtactcctgctgctatcctgtcatactggatggcacc
atgatcggttgggttgagaaagatctcgcacccgctcttgttgattctctccgcaggttc
aaggtgctgaaggagaaaaagattcctccatggactgaaattgtgctagttcctcaaacg
ggtaaagcaagcttgtacccaagcctgtatctgttcaccacaccatgtcgcatggtgcga
ccggtccgcaacctcgccttgggaaaagaggagctcattggcaccttcgaacagatttac
ctgaatgtggggatatttgaggatgagattgagcatggcgtcaccacccatcaggaactc
ttcccccacagtatgctcagtgtggtggccagcttcatccccttctcagaccataatcag
agtccaaggaacatgtaccagtgccagatgggtaaacagactatgggtttccctctgcac
tcgtatcaggatcgctcggataataaactttaccgtttacagaccccccagagtccactg
gtccgtcctctcatgtacgaccactacaacgtagacaactatcccattggcacgaacgct
atagtggctgtgatctcttacactggctatgacatggaagatgcaatgattgtgaacaag
tcttcatgggaacgtggttttgcccatggctctgtctataagactgagatcgtggacctg
tccttgaaggccaaaggtgaggacagcatggtgtttgggattaaaccaggtgacccgaag
gtgtctggcaggttggatgcagatggattgccacctataggatccaagctaaattacgga
gaccctttttacagctacatcaacctcaacacaggccagagctatgttaccttctacaag
agtcaggagagttgtgtagtggacaacatcaaagcatgcagcaatgatgcaggaacaggc
cgcttcaagcgtgtgtgcattactatgcgagtaccacgcaaccccaccattggagacaag
tttgccagcaggcatggtcagaagggtatcctgagtcgcctgtggccggctgaggacatg
cctttcagtgagagtggcatgacccctgacattctgttcaacccgcatggctttccatca
cgcatgaccatcggcatgctgatcgagagcatggcgggcaaatctgcagcaatgcacggc
ctgtgccatgacgccacgccgttcaccttctctgagaagaattcggctctggaacatttt
ggcaccctgctgaaggcggcgggttacaattattacggcacagagcgtctctactcagga
ctgagcggactggaactggaggctgacatctttgtaggtgtggtttattaccagcgtctg
cgccacatggtctcagacaagtttcaggtgaggacgacgggtgcgagggacaaagtaacc
aatcagccggttggagggaggaacgtgcaaggtggcatccgctttggagagatggagcgc
gatgccctgctggcccatggctcatccttcctgctgcacgatcggctgtttaactgctcg
gaccgatccatagctcaggtgtgcgtgcgctgtggcagtttgctatctccactgctggag
aagccgcccccgcactggtcagccacacgacatcggaacactatctgctcactgtgcaag
aagagcgacgccatcgacacagtggctgtcccctatgtgttccgctactttgtggctgaa
ctggcggcaatgaacattaaaattaaactagatgtgaagtag
DBGET
integrated database retrieval system
