Tachysurus vachellii: 132847508
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Entry
132847508 CDS
T09596
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132847508 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
132847508 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132847508 (nfkb2)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
132847508 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
132847508
NCBI-ProteinID:
XP_060728842
LinkDB
All DBs
Position
6:21122065..21136262
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AA seq
916 aa
AA seq
DB search
MAGALSMDESQYNMKMFDSNEFVMDVSYHQLMPTFEIKNEPFIPETAHGPYLQIIEEPKQ
RGFRFRYECEGPSHGGLPGASSERNRRTYPTVKLCNYVGVARVEVQLVTHTDPPRVHAHS
LVGKQCNDNGTCSIDVGPSDLTAQFSNLGILHVTKRGVVEVLTKRLKKEKKRAKQPGYHF
SETEEQAIVREAKELGKNMDLNIVRLKFTAYLKDSNGGFTRALKPVVSNPIYDSKSPNAS
NLKISRMDKTCGSVIGGDEIFLLCDKVQKDDIEIRFYEEEDEGGWEAYGDFSPTDVHKQY
AIVFRTPPYHKEISRPVTVFLQLKRKKGGDCSEPKQFTYFPQYQDKEEVMRKKMKNLPQQ
YDNWRGPHGGAGGLGRGAGGFGGPGGGGGGGGGIYGAGFSFSPLDTITHYGGSCSGFAGG
TLMTESALQPEKAQERQQQQQQHETPTSLTAKQQLFQIASALQKQSTAAATHSAKALLNY
CCTGDVRYLLAMQRQLCGVQDENGDTPLHLAIIHQQPAVANKLIQTVINTPQFKFINKFN
HLSQTPLHLAVITQQPKLVEILLKVGADPALLDRDGRTAVHLAAHSGDEVILRVLINMLG
ERHSHLLNTADFSGLYPLHLAVRKGGERCLRVLVEAGAKINMPEQKSGCTALHLAVKENL
FKVTCILITELKADINACTFGGNTPLHLAASLGSPPLCSMLVAAGADKQLENDEPLFCSS
SSSDEEDQDVRRDSVEGLDEQVLEMHIQDMSISSERRRINPRKRPAVGHTPFDLANCQKV
RDLLDSPKPSHILPKKTKKSTEDVNQPLDTETVSKLCGILNKCEVSWKELAEKLGMLTLA
KLFQDSPSPCQTLLENYQLSGGPLEGLVDALQSLGLTDGAQFLRNRQPSEDKQSTDTKVD
SGFVSQEVDTPVVAND
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggccggagctctgagcatggacgaaagtcagtacaacatgaaaatgtttgacagcaac
gagtttgtgatggacgtctcctatcaccagttaatgcccacgtttgagataaaaaatgaa
ccctttattccagaaacagctcatggaccttacttgcagataattgaggagcctaaacaa
agaggcttccggtttcgttacgagtgtgagggtccatctcatgggggtttaccaggtgct
tccagtgagaggaacaggaggacgtatcccactgttaagttgtgtaactacgtgggtgtt
gcgcgcgtcgaggtgcagctcgtcacacacaccgatccccctcgtgtccacgcacacagc
ctcgttggaaagcagtgtaatgataacggaacctgcagcatagatgtgggtcccagcgac
ctcacagcacagttcagcaatttgggtatacttcatgtcactaaaagaggagtggtggaa
gttctgacaaagagactaaagaaagagaaaaagagagcgaagcaacctggataccatttt
agcgagacagaagagcaggctattgtccgagaagccaaagagctgggcaagaacatggac
ctaaacatagtgaggttaaagttcaccgcttaccttaaggacagcaacggaggattcacc
agagcgttgaaaccggtcgtctccaaccccatctacgacagcaaatctcccaacgcatcc
aatctcaagatctcacgcatggataagacttgtggctcggtgattggaggggatgagatc
ttcctgctgtgcgacaaagttcaaaaagatgatattgagattcgtttctacgaggaggag
gatgaggggggctgggaagcgtacggagatttctctccaactgatgtacacaaacagtat
gccatagtctttaggacgccaccctatcacaaagagatctcacgacccgtcactgtcttt
cttcaactcaagagaaagaagggtggagactgcagcgagcccaaacagtttacttacttc
ccacaatatcaagataaagaggaggttatgcggaaaaagatgaagaatcttcctcagcag
tatgacaactggcgggggccgcacggtggagcaggaggtctgggcagaggagctgggggc
ttcggcggtcctggaggcggtggtggaggaggaggaggaatatacggagcaggattttcg
tttagtcctttggatacgatcacccactacggtggcagctgtagtggatttgcaggaggc
acactaatgacagaatctgctctacagccagaaaaggcccaggaacgccaacagcaacaa
caacagcatgagacgcccaccagcttaacagcaaagcagcagctctttcagatcgcctcg
gctctacagaagcagtccaccgcagcagccacgcacagtgctaaggctctgctgaactac
tgctgcacaggggatgtacgctacctcttggccatgcagagacaactctgtggagtgcag
gacgagaacggagacacgcccttacatttggccattatccaccagcagcccgcagtggcc
aacaagcttattcagaccgtcataaacactccacaattcaaattcatcaacaagttcaac
cacctcagccagacccccctgcatttggctgtgatcacccagcagcccaagttggtggag
atcttgttaaaagtaggtgccgaccctgccttactggacagggacggacggacggcggtg
catctggccgctcattccggagacgaagtcatcctcagagtgctgattaacatgctagga
gagcgccattctcacctgctgaacactgctgacttctcgggtttatacccactgcatctg
gctgtgagaaaaggaggcgaacgttgtctgcgtgtgctggtggaggctggtgccaagatc
aacatgcctgaacagaagagcggttgcacagcactacacctggctgttaaggagaatctt
ttcaaagtgacctgcattctcatcactgagctgaaggctgacattaacgcatgtaccttt
ggaggaaacactccactgcacttggctgccagtcttggctctccacccctctgctccatg
ctcgtagcagcaggcgcagataaacaactggagaatgacgagccactcttctgtagctcc
tcgtcttctgatgaggaagaccaggatgtgaggagagacagcgtagaaggactagacgaa
caggtcttagaaatgcacatacaagatatgtcgatatcatcagagagaaggcgaatcaac
ccacgcaagagaccagcagttggacatactccttttgacctggctaactgtcagaaggtt
agagatctgttggatagtccaaagccgagtcacattttacccaaaaagacaaaaaagagc
actgaagatgtgaaccaacctctggacaccgaaacagtcagtaagctgtgtggaatcctc
aacaaatgcgaagtgtcatggaaagagctggcagagaagctaggaatgcttaccctggca
aaactgttccaagacagcccgtcaccttgccagacgcttctagaaaactaccagttaagc
ggtggtccgttagaggggctggtggatgcactgcagagtctcgggctgacggacggggcc
caatttctgagaaacaggcagcccagtgaggacaagcaaagcacagacacaaaggtggac
agtggctttgtcagtcaggaggtggacactccagttgtggcaaatgactga
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