Tachysurus vachellii: 132847551
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Entry
132847551 CDS
T09596
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132847551 (ssrp1b)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132847551 (ssrp1b)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
132847551 (ssrp1b)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
132847551 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
YABBY
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
132847551
NCBI-ProteinID:
XP_060728923
LinkDB
All DBs
Position
6:22373986..22388122
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AA seq
697 aa
AA seq
DB search
MSDVLEFSDIYQEVKGSWNDGRLRFSKQMVVYKNSKTGKVDSIPVPELSQAQWRRVCLGH
SIKLSTSTGHVYKYDGFKDADFEKISEYFKDNYKVELTEKDMCVKGWNWGTAKFNGPLLS
FEVSDTPVFEIPLSSVSQCTTGKNEVTLEFHQNDDTEVSLMEVRFYVPPTTGDEGADPVE
AFAQNILSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDINLTLNMSEEEVERRFE
GKLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEGMKVRDDMYSDSDEDQHDAYLERMKQEGKIREEANDSDDSEAGSDES
FNPGDEDDDVAEEYDSKASASESSAEGADSEEDRKKKPVKKAKTVKEAKHKKEKKMKDSS
APKRPMSAYMLWLNSSRDRIKAENPGISVTEILKKAGEMWKQLSKDKKEEWEGKSDEAKK
EYERAMKQYREKSGGTSKKPRKKGGKSDERKKKKLGGGRERERNKPAGNESFKSPEFISS
EESSSESNRGKGRKRKGSDYEEKQASSTPSSEESVSD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttctggagtttagtgacatttatcaggaggtcaagggttcctggaatgac
gggcgtctgcggttcagtaagcagatggtggtttataaaaacagtaagacgggtaaagtg
gacagtatccctgtcccagagctcagtcaggcccagtggaggagggtctgcctgggtcac
agcatcaaactgtccaccagcaccggacacgtgtacaaatatgatggctttaaagatgca
gactttgaaaaaatctctgagtattttaaagataattacaaagtggagctgaccgaaaaa
gacatgtgtgtcaaaggctggaactggggcactgctaaattcaacggccctctgctgtca
tttgaagtgagtgacactcctgtgtttgagattccgctttccagtgtatcccagtgtacc
actggaaaaaatgaagtcactctggagtttcatcagaatgatgatacagaggtgtcgctc
atggaggtgcgtttttatgtcccacccactacaggagatgagggggcagatcctgtagag
gcatttgcccagaatattctttctaaggcagatgtgattcaggctacaggagacgctgtg
tgtattttccgagagctgcagtgtcttacacccaggggaaggtatgatatacgtatctac
cccaccttcctgcatctgcatggtaagacatttgactacaagatcccctacaccacagtg
ctgcgtcttttcctgctcccccacaaagaccagagacagatgttcttcgtgatcagtctg
gatcctcccattaaacaaggacaaacccgctatcactttctcatcctgctattttccaag
gacgaggatatcaacctcaccctcaacatgagcgaggaagaggttgagaggcgatttgaa
ggaaagctgactaagaacatgtctggctctctatatgagatggtcagcagggttatgaaa
gctcttgtcaacaggaagatcacagtacctggaaactttcagggtcactctggggctcag
tgtatcacttgctcctataaggccagctcaggtctgctgtatcctctggagagaggcttc
atctacgttcacaagcccccagtgcatctgcgcttcgaggagatctcttgtgtgaacttc
gccagaggcaccacaaccacacgctcctttgactttgaaattgagaccaaacagggcaac
cagtacacattcagcagtattgagagagaagagtatgggaagttgttcgattttgtcaat
gctaagaaactgagcatcaagaacagaggcttcaaagagggtatgaaggtcagagatgac
atgtacagtgactctgatgaggatcagcatgacgcgtacctggagcgcatgaagcaggaa
gggaagatccgtgaagaggccaatgacagtgatgactcggaggctggcagcgatgaatca
tttaaccctggggatgaagatgatgatgtcgcagaagagtatgacagtaaagcctcagcc
agtgaaagtagtgctgaaggtgcagacagtgaagaagacagaaaaaagaaacctgtcaag
aaagccaaaactgtgaaggaggctaagcacaaaaaggagaagaagatgaaggacagcagc
gcccctaagaggccaatgagtgcctatatgctgtggctcaactccagcagagatcgcatt
aaagctgaaaaccctggaatctcagtcactgagattttaaagaaggccggtgagatgtgg
aagcagctgagcaaggacaagaaagaggagtgggaagggaaatctgacgaagccaagaaa
gaatatgagcgagcgatgaaacagtacagagaaaaaagtggaggcacctcaaaaaagcca
agaaagaaaggaggaaaaagtgacgagagaaagaaaaagaagttaggtggagggagggaa
agagagaggaacaagccagccgggaatgaaagctttaaaagtccagagttcatctccagt
gaggagagttcgtccgagtccaaccgtggaaaaggccgtaaacgcaagggctcagattat
gaagagaaacaagcaagcagcactcccagctcagaggagtctgtctcagactaa
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