Tachysurus vachellii: 132847628
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Entry
132847628 CDS
T09596
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38 isoform X1
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132847628 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132847628 (usp38)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132847628 (usp38)
Peptidases and inhibitors [BR:
tvc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132847628 (usp38)
Ubiquitin system [BR:
tvc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132847628 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
VATC
Motif
Other DBs
NCBI-GeneID:
132847628
NCBI-ProteinID:
XP_060729085
LinkDB
All DBs
Position
6:25376278..25394082
Genome browser
AA seq
1009 aa
AA seq
DB search
MDKILEGLVSSSHPIPVKRAIVKMVVEAAEKEVTPEQCQALFHLTARLILLGEEAFQRQV
GHQVQEAYARYHRDEFARFLSKDYVLDLLRQGYGPLDRRDPAILDFLHGCLRLLISCPAV
LDLAPVLQTEVLRMVCERPDAVFCSKLAMLLSDFPQCVPRNKAAVVLCQQFVRTFAHFQC
PAAEEAKLRRYVGNVGCVAALLQGIWKAEPATLLPSLQEVFAIISSTDPSTEPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDASMTQALSRMIDWLSWPLAHHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPHIVPLVK
TLQSDGLPNSEAFLLQFTELIHCMMYQYSGFPDLYDSILKVIKDLPKPSEEKIKYVLNQS
AWTSQSNSFASGLLRITCKSETGKTGLMNLGNTCYLNSIIQVLFMATDFRRRVLSLNLNG
SDMLMKKLQLLFAFLAHTQRAAYAPRSFLDASRPPWFTVGSQQDCSEYLRFLLDRLHEEE
KTLLALQTAKPKIRFSDSEGTDDTQAQTNTLSRSQTKLADAEGDARTLVERMFGGRLSTS
IRCLQCHSLSEKEEPFTDLSLAFCPTGTMGSSHQGAVNGGSENPEGATKDERSEERPKTE
AVLSLSDLLEYFLAPEILEKENCYFCERCGSLQRAERAMHVVTAPEYLILTLLRFSYDST
CHVRRKILDNVDTPLHMYLPVRPHGTSSFSSSSSPQSVHMDSPDSGENLAKKLKPSHKEK
EEEAEGVTDSGIESGRRDWGSGERCVPYVLCSVVMHSGMSSESGHYYSYSRNTSGTSTNP
SFKSPDSDSGVGVSESSRASQEELEHAGQVSKEWLLFNDSRVTFTNFQSVQNITSRFPKD
TAYVLIYRKQEEGGEQAGGSRATVNGSRLNGEPPLHKDLMDAITKDNKLFLQEQELNARA
RALQAASASCSFRPNGSDDNEPPGSFGPSGGGGGGGGGGGFSTVSRLVF
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattcttgaaggactggtgagctcatcacacccgatccctgtgaagcgggcc
atagtgaagatggtggtagaggcggctgagaaagaggtgaccccggagcagtgtcaagcc
ctttttcatctcactgcacgcctcatcctgctgggcgaagaggccttccagcggcaggtg
ggtcaccaggtgcaggaggcgtacgctcgctaccaccgggacgagtttgcccgcttcctg
agtaaggactatgtcctggacttgctgcgtcagggctacggccctctggaccgccgagat
ccggccatattggacttcctccacggttgcctgcggcttcttatcagttgcccggctgtg
ctagacctggcgccggtgctacagactgaggtcctgcgcatggtctgtgagcgacctgac
gccgtgttctgcagcaagctcgccatgctgctcagcgattttccccagtgtgtaccgcgc
aacaaagctgccgtggtgctctgccagcagtttgtgcgaacttttgcacatttccagtgt
ccggcagccgaggaggcaaagcttaggcgctacgtagggaatgtgggttgtgtggccgcc
ctgctgcaggggatctggaaggccgagccagccacccttctgccctcactgcaggaagtc
ttcgctattatctcctcaacagatccatccactgaaccctcaatcgctctggcgagtctg
gtgcagcacatccctctgcagatgatcacagttctcatcaagagtctcaccactgaccaa
aacgttaaagacgccagcatgacacaggcactcagcaggatgatcgattggctttcatgg
ccgttggcccatcacgtagacacctgggttattgctcttctgaagggactggctgccgta
cagaagttcaccatcctcatcgacgtcaccttgcttaaaatcgaactggtctttaatcgt
ctgtggtaccccatagtgagacagggggcattagcagttctctctcacatgttgctgagc
ttccagcactcaccggaggccttccatctggtggtcccccacatagtaccgctggtgaag
actttgcagagcgatggcctccctaacagcgaagccttcctgctgcagttcaccgagctc
atccactgcatgatgtaccagtactctggcttccctgacctttatgacagcatcctcaaa
gtcattaaggacctccctaaacccagtgaagagaagataaagtatgttctgaaccaaagt
gcctggacctcgcagtcaaactcttttgcctctggactgctgaggattacgtgcaaatcg
gagacggggaagaccggactcatgaacttgggcaacacgtgctatctaaacagcatcatt
caggtgctgttcatggctacagattttagacgacgcgtattgtctctgaacctgaacggc
tccgatatgctgatgaagaaactgcagctgcttttcgctttcttggcacatactcagcga
gcagcgtacgcaccgaggagctttctcgatgcctcacggccgccctggttcaccgtgggc
tcccaacaggactgttctgagtatctccgctttcttttagacaggctgcacgaggaggaa
aagactcttcttgctctccagacagccaaacctaagatccggttctctgactctgagggt
acggacgatacacaagctcagaccaacactctgtctcgttcccagactaaactggcggat
gccgagggtgatgcacggactctggtggagcggatgtttggcggacgtctgtccacgagc
atccgctgcttgcagtgccacagtctttctgagaaagaggaaccgtttactgatctttct
ctcgctttttgcccaacgggcacgatgggttcctcccaccagggggcggtaaacggcggc
agtgagaaccctgaaggcgcaacaaaggatgagcggagcgaggagagacccaagacggag
gcagtgctgtccctgtcagatctgctcgagtatttcctggcaccagagatcctggagaag
gagaattgttacttctgcgaacgctgtggctccctgcagcgggcagaaagagccatgcac
gtggtaactgcccccgagtacctcatccttactcttttgcgcttctcgtatgactcgacg
tgccacgtgcgacgcaaaatcctggacaacgtagacaccccactgcacatgtatctgcct
gttcgaccccacggcacgtcctcattttcctcttcttcgtcaccacagtctgtgcatatg
gactctccagacagtggcgagaacttggccaagaagctgaaaccttctcataaagagaaa
gaggaggaagccgaaggtgtaacggacagcgggatagagagcgggagaagggactggggg
tcaggggagcggtgtgtaccttacgttctgtgttctgtagtgatgcattctgggatgtcc
tcagagagcggacactactactcgtacagcaggaacacgagcggtacatcaaccaatcct
tcttttaagagtccggattcagattccggtgtcggcgtttcagagagctcaagagcgtca
caggaagaactggagcatgcagggcaagtctccaaggaatggctcctgttcaacgacagc
agagtgacctttaccaacttccagtccgtgcagaacatcactagccgtttccccaaggac
acggcctacgtcctgatttacaggaagcaggaagaaggcggggaacaggctggaggttcg
agagctaccgtgaacggctcgaggctcaacggggaaccacctcttcataaagatctgatg
gatgccatcaccaaagacaacaaactcttcctacaggagcaggagcttaacgcgagggcc
cgtgctctccaggccgcctcggcctcctgctcgttccgtcccaacggctcagatgacaac
gagcccccgggtagcttcgggccctcgggtggaggaggaggaggaggaggaggaggaggc
ttcagcactgttagcagactggtcttctga
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