Tachysurus vachellii: 132848016
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Entry
132848016 CDS
T09596
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
tvc
Tachysurus vachellii
Pathway
tvc03020
RNA polymerase
tvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132848016 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
132848016 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132848016 (polr2d)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132848016 (polr2d)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
132848016 (polr2d)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132848016 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
132848016
NCBI-ProteinID:
XP_060729509
LinkDB
All DBs
Position
7:24663614..24667183
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AA seq
141 aa
AA seq
DB search
MATAGASNVGDIEEDASQLSFPKEFENSETLLNSEVHMLLEHRKQQNESAEDEQELSEVF
MKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLEGR
FEDEELQQILDDIQTKRSFQY
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcaggagcatcaaacgtgggggacattgaagaagacgcctcacagctgtct
ttccccaaagagtttgaaaattcagagactctcctgaactccgaggtccacatgctcctg
gagcaccgaaaacagcagaacgagagcgccgaagacgagcaggagctctcagaggtcttc
atgaagacgctgaactacacggctcgcttcagccgcttcaagaaccgcgagaccatcgcc
agcgtccgcagtttgctcttgcagaagaaactacataaatttgagctggctagtttggcc
aatctgtgtcccgaagctgcagaagaagcaaaagcgctcattcccagcttggaaggtcga
ttcgaggatgaagagctgcagcagattctggatgatattcagaccaaaagaagctttcag
tattga
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