Tachysurus vachellii: 132848208
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Entry
132848208 CDS
T09596
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132848208 (cpdp)
Enzymes [BR:
tvc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
132848208 (cpdp)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
132848208 (cpdp)
Prokaryotic type
132848208 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
132848208
NCBI-ProteinID:
XP_060729729
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All DBs
Position
7:complement(1163462..1169933)
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AA seq
539 aa
AA seq
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MTCVCYKTLLLHVSGGSCSVFRRVCVSEVKISSVIMSEKKRNLKRKGEPVKGLEKLSAAR
GADRGRGGEGGMKEIRRNSAEFKFNMKRLRFLSDAQRVRQGCGAVMYWMVRDQRVQDNWA
LVYAQQLALEEKLPLHVCFCLVPRYLESTYRQYAFMLRGLQEVAKECTSLDIQFHLLSGE
PELMLPGFVKRWDVGGVVTDFNPLRLPLQWTERVKKELPSDVPFIQVDAHNVVPCWEASN
KLEYAARTIRGKITKLLPEFLTEFPPVNPHPHPSTRKAKKVDWQEVMSSLEVDRSVGEVS
WAAPGTTGGTAMLESFIDKRLRLFGGQRNNPNADALSQLSPWIHSGQISAQRVLLEVQRC
GKHLAESVASFKEELLVRRELCDNFCFYNDNYDNINGAYDWAKKTLKDHAKDPRPYLYSR
EQLENADTHDQLWNAAQRQLVLEGKMHGFMRMYWAKKILEWTASPEEAVNISIYLNDRFS
LDGCDPNGYVGCMWSICGIHDQGWAERPVFGKVRYMNYAGCKRKFDVGQFERRYAEKKA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcgtttgttataaaacactacttttgcacgtgtcaggaggatcgtgcagtgtt
tttaggcgcgtttgtgtctcagaagtgaaaatatcttcagtgatcatgtccgaaaagaaa
aggaacctgaagcgcaaaggagagccggtgaaaggtctggagaagctttcagcagcccgt
ggagcggacagaggaagaggaggagaaggagggatgaaggagatccgtagaaactcagct
gagtttaagttcaacatgaagcgtctcaggttcctgtctgacgcccagagagtgagacag
ggctgtggggcagtgatgtactggatggtccgggatcagagagtgcaggataactgggcg
ctggtttacgctcagcagctcgctctggaggagaaattgcctctacacgtgtgtttctgc
ctcgtgccacggtatttagagtcgacttatcgccagtacgccttcatgctcaggggacta
caggaagtggccaaggagtgcacaagcctggacattcagtttcacctccttagcggcgag
cccgagctgatgctgcccggttttgtgaagcgctgggacgtcggcggcgtggtgactgat
tttaaccctctcagacttccactgcagtggactgaacgagtgaaaaaggagcttccatca
gacgtcccctttattcaggtcgacgcccataacgtggtgccgtgctgggaggcgtcgaat
aaactggagtacgcagcgagaaccatccgagggaaaatcaccaaactcctcccagagttc
ctcaccgaatttcctccggtgaacccgcaccctcacccgtccaccagaaaggcaaagaag
gtagattggcaggaagtgatgtcatcgctggaggtagaccgcagcgtcggggaggtttcg
tgggcggcgccgggaacgacaggaggaaccgccatgctcgagtcttttatagacaagcgg
ctgcgtctgtttggaggacagaggaacaacccgaatgctgacgcccttagccagctctca
ccgtggatccactcaggtcagatatcagcccagcgtgtgctgttggaggtgcagcgttgt
gggaaacacttggccgagtcagtggcatcattcaaagaggagctgctagtgcgcagagag
ctgtgtgataacttctgcttctacaacgacaactacgacaacatcaacggtgcatatgat
tgggcgaagaagacgctgaaggatcacgctaaagaccctcggccttacctgtacagtcga
gagcaactggaaaacgcagacacgcacgaccagctgtggaacgctgcacagaggcagctc
gtgttagaggggaagatgcacggcttcatgcgcatgtactgggctaagaagattctggag
tggacggcttcacccgaggaggcggtgaacatctccatctatctgaacgatcgcttctcg
ctggacggctgcgacccgaacggatacgtgggctgcatgtggtccatctgtgggattcat
gatcagggctgggccgagcgacccgtgttcgggaaagtgcgctacatgaactacgcaggc
tgcaagcgcaagtttgacgtgggccaatttgagaggaggtacgccgagaagaaggcctga
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