Tachysurus vachellii: 132848307
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Entry
132848307 CDS
T09596
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132848307 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132848307 (copb2)
Membrane trafficking [BR:
tvc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132848307 (copb2)
Exosome [BR:
tvc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132848307 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
132848307
NCBI-ProteinID:
XP_060729887
LinkDB
All DBs
Position
7:3701758..3710226
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AA seq
936 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDVPV
RAAKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCFAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIVTGSEDGTVRIWHSSTYRLENTLNYGMERVWCVCGLRGSNNIALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGVYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMADKVAASQESNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIGYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNGAMVSKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKEAFVAEQYLRETCLGNSRPATDYPLVTANEERNVLEEA
SGYEPKGLPHTNTKQTADPEEATEEAEPVPAVTPTPVAAPVASAAPPKPEPVKKEMDDMT
MFREKTLEELEDDLDNMDLDDIDTTDVNLDDDFLDD
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctggacatcaagcgcaagcttacagctcggtcagaccgagtcaaaagc
gtggatctccatcccaccgagccatggatgctggccagtctctacaacggcagcgtgtgc
gtctggaaccacgaaacacaaaccttggtgaagacatttgaagtgtgtgacgtgccagta
agagctgcaaagtttgtcgcccggaagaactgggtcataaccggagcagatgacatgcag
atccgagttttcaactacaacacgttggaacgggttcacatgttcgaggcgcattcagat
tacatccgatgcttcgccgtgcatcctactcagccctacatcctcactagcagtgatgac
atgctcattaagctgtgggactgggagaagaaatggtcgtgcagtcaagtgtttgagggc
cacacacactatgtcatgcagattgtcatcaaccctaaagacaacaaccagtttgcgagt
gcgtcactggatagaaccatcaaggtgtggcaactgggttcctcatcacccaacttcact
ctggagggacacgagaaaggcgttaactgcattgattattacagtggcggagataagccg
tatctcatttctggtgctgacgacaggctggtgaagatctgggactatcagaataagacg
tgtgtgcaaacactagagggtcacgcccagaacgtgtcctgcgtcagcttccaccccgag
ctgccgatcatcgttacaggatccgaggatggtactgtacgtatctggcactcgagcacc
taccgcctggagaacacgctgaactacggcatggagagggtgtggtgcgtgtgtggcctg
cgcggttccaacaacatcgcgcttggttacgacgagggcagcattattattaagcttggt
cgtgaggagcctgccatgtccatggacaccaacggtaagattatctgggccaagcattcg
gaggtacagcaggcgaacctgaaggccatgggggacacggagattaaagacggagagagg
ctgccactagctgtcaaagacatgggcagttgtgaaatctacccccagactattcagcac
aaccctaacggaaggtttgtggtggtatgcggagacggagagtacatcatctacacagcc
atggctctgaggaacaagagcttcggctcggcgcaggagtttgtctgggcccatgattct
tctgagtatgcaatcagagagagcagcagcgtggtgaaaatcttcaagaactttaaggag
aagaagtccttcaagcctgactttggagccgagggtgtctacggcggctttctgctgggc
gtcaggtccgtaaacggcttggctttctacgactgggaaaatacagagctgatacggcgc
atcgaaatccagcccaaacatatcttctggtcagactctggagagctggtgtgcatcgcc
acagaggagtcgttcttcatcctgcgctacatggcagacaaagtggctgcgtcacaggag
tccaatgaaggggttactgaagatggcattgaggatgcttttgaggtccaaggtgagata
caggagattgtaaagacaggtctgtgggtgggagactgcttcatctacaccagctctgtc
aaccggctgaactactttgttggaggagagatcgtcaccattgctcacctggataggacc
atgtacctgctgggctacatccctaaagatgaccgcctgtacctgggtgacaaggagctg
aacatcgtcagttactcgctgctggtgtcagtgttggagtaccagacggccgtcatgcgg
cgcgacttctctatggctgacaaagtgctccccactattccaaaagagcagaggaccagg
gtggcccacttcctagagaaacagggtttcaaacagcaggcactggccgtgtccactgac
ccagagcacaggtttgagctcgctctacaactaggggaactgaagattggctaccagcta
gcagtagaagcagagtctgagcaaaagtggaagcagctggcagagctggctatcagtaag
tgccagtttggcttggcacaggagtgccttcatcacgcccaggactatggaggcctgctg
ctgttggctacagcctctggcaatggtgctatggtgagcaaactggctgagggtgctgaa
cgtgacggcaagaacaacgttgccttcatgacctacttcttgcaggggaagttggaccag
tgtctggaacttttgattaggaccaaccgcttgcctgaggccgccttccttgctcgcacc
tacctgcccagccaagtgtccagagtggtaaagctgtggagagagagcctggcaaaggtg
aaccagaaagccgcagagtcgctggccgaccccaccgaatacgagaacctgttccctggg
ctgaaagaggctttcgtggctgagcagtacctaagagagacctgcctgggaaatagcaga
ccggccaccgactatccactggtcacggccaatgaggagcggaacgtgctagaagaagcg
agtggctatgaacccaaaggcttacctcacaccaatacaaagcagactgctgacccagag
gaagctacagaagaagctgaacccgtacccgcagtcacgcctactcctgtagctgcaccg
gtagctagtgcggctcctccaaaaccagaacctgttaaaaaagagatggatgacatgaca
atgttcagagaaaagactctggaggaactagaggacgatctggacaacatggatctggac
gacatcgacactacagacgtcaacctggacgacgacttcttagatgactga
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