Tachysurus vachellii: 132848381
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Entry
132848381 CDS
T09596
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132848381 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132848381 (smarcd3a)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132848381 (smarcd3a)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132848381 (smarcd3a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132848381 (smarcd3a)
PBAF complex
132848381 (smarcd3a)
GBAF(ncBAF) complex
132848381 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
132848381
NCBI-ProteinID:
XP_060729995
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All DBs
Position
7:complement(8237380..8262646)
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AA seq
505 aa
AA seq
DB search
MATEDSAGGARKATKSKLFEFLVHGVRPGMTTGARMPHQGAPMGPPGPPYGGTPPVRPGM
PNPTLDPNRKRPTTTPPVQAPSVQSRPRKKPLGFQGANEVSTRTLDLREVQSEPAIGFNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKPDSEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHEKEYISCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDP
IVINHVISVDPNDHKKTACYDIDVEVDDPLKTQMNGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDVVGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQALAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaggattctgctggtggtgctcgcaaagccaccaagagtaaactgttcgag
tttctcgtccatggagtgcgtccaggtatgaccacaggggcaaggatgcctcatcaaggt
gcccctatgggtccacccggccccccgtatggagggacacccccagttcgcccagggatg
cccaaccctacactggaccctaatcgcaaacggcccaccacaactccaccagtacaagcc
ccatccgttcagagccggcctagaaagaaaccactgggattccaaggagccaatgaggtt
tctacaagaacgctggacttgcgagaggtccagtctgagccagcaattggattcaatgcc
aagagaaggaaaatggcagacaagattctccctcaaaggatccgtgagctggtgcccgag
tcgcaggcgtacatggaccttttggcttttgagcgcaaactggaccaaacgattatgagg
aagcgggtggatatacaggaggccctcaagcgaccgatgaagcaaaagaggaagcttcga
ctgtacatctccaacacgtttaacccagctaaacctgactcggaggactcagagggcagc
atcgcgtcttgggagctaagagtagaaggcaagctgctggatgatcctggaaagcaaaag
aggaagttttcttctttcttcaagagcttggttattgagctggataaagacctctatgga
cctgataaccacttagttgagtggcatcggactcccacaacccaggagacggatggcttc
caggtgaagaggcctggagacgtgaacgtccggtgcacgttgctgctcatgctcgattac
cagccaccccagtttaagctggaccctcggcttgctcgcctgctgggcatccacacacag
acgcgctcctgcatcatccaggccttgtggcagtatgtcaagactaacaagctgcaggac
tcccacgaaaaggaatacattagctgtgacaagtatttccagcagatctttgactgcccg
cgtctgaagttcagtgagattcctcagcggctcactaacctgctgctgccccctgacccc
attgtgatcaaccatgtcatcagtgtggaccctaatgaccacaagaagacagcctgttat
gacatcgatgtcgaggtggacgatcctctaaagacccaaatgaatggttttctgctctcg
acggctaatcagcaagagattgcgtcactagacaacaagatccatgagacgatcgaatcc
atcaaccagctgaagatccagagagatttcatgctcagtttctccagagatcccaagggt
tacattcaggactggatctgttcacaaaatcgagacctgaagctaatgaccgatgtggtg
ggaaacccagaggaggaacgaagagccgagttttataaccagccctggtctcaagaagct
gtgagtcgatacttttactgcaagatccaacaacggaggcaagaactcgaacaagccttg
gcaatgcgcaccacttaa
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