Tachysurus vachellii: 132848384
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Entry
132848384 CDS
T09596
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
tvc
Tachysurus vachellii
Pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132848384 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132848384 (puf60a)
Spliceosome [BR:
tvc03041
]
Complex A
U2 snRNP components
U2 related factors
132848384 (puf60a)
Complex B
132848384 (puf60a)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
DUF1543
Motif
Other DBs
NCBI-GeneID:
132848384
NCBI-ProteinID:
XP_060730004
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Position
7:complement(8293770..8306915)
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AA seq
561 aa
AA seq
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MMENGQSTASKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQSLAQQQPINNLQVPVD
NLDGFWKNLLVESACSFGDLAIPNSIQMASLTMAGFGDSLSPLQSVAAQRQRALAIMCRV
YVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALEQMN
SVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGR
IKSCMLAREPTTGKHKGYGFIEYDKAQSAQDAVSSMNLFDLGGQYLRVGKAVTPPIPMLA
PTAPGGLPPAAAVAAAAATAKITAQMAWNLSTPENRTEDFLNCLEAVAGASILGAMTAGS
VNLPQIPQAVMAAQAPGVITGVTPARPVIPQVGLVNPVLASPPVISAAVAAAQEAKEKKD
KEDEEAAFDGTGQEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVGPEDIDDD
LEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAASEMNKAIQALNNRWFG
GRKVVAEVYDQERFDNSDLSA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaatggacagagcacagcctcgaagcttggcctgccgcctctcacgcctgaa
cagcaggaggccctgcaaaaggcaaagaagtatgccatggagcagagcatcaagagtgtg
ctggtcaaacagagcctcgctcagcaacagccgattaacaacctccaggtacctgtagat
aacttggatggcttttggaaaaacctccttgttgaatctgcatgcagttttggagacctg
gctatacccaattccatacagatggcctcactgaccatggctggcttcggtgactcgctt
tcaccgttacagtcggttgcagcacagcggcagcgagcacttgccataatgtgccgtgtt
tacgtaggctcaatctactatgagcttggagaggataccattagacaagcattcgctcct
ttcgggccaatcaagagcatcgacatgtcctgggactcggttacactaaagcacaagggt
ttcgcatttgtagagtatgaggtaccggaggcagcacagctggcattagagcagatgaac
tcggtcatgttaggtggaagaaacattaaagtgggacgacctagcaacatcggtcaggct
cagccaatcatagaccagttagccgaagaagcccgcgcctttaacagaatctacgtagct
tctgtgcaccctgacctgtcggacgacgacatcaagagcgtctttgaggcctttgggaga
atcaagtcctgtatgctggcacgggagcccacgacaggaaaacacaagggctacggcttc
atagagtatgacaaggcccagtcagcgcaggacgcagtgtcctctatgaacctgtttgat
ttgggtggtcaatatctacgtgtgggcaaggcagtcaccccgcccatcccaatgctggcg
cccaccgcaccggggggccttccccctgctgctgctgtagctgctgctgcagcaactgcc
aaaatcaccgcccagatggcatggaatctttccactccggagaatcggacagaagacttc
ctcaactgtctggaagcggtggctggtgcatcaatcctaggggcaatgacggccggctct
gtgaacctgccacagatcccccaggccgttatggcagcccaggccccaggggtcatcaca
ggtgtgacaccagcacgccctgtaataccccaagtgggcctggtgaaccctgttctggcc
tctccgccggtgatctctgctgctgtggctgccgcacaggaggccaaagagaagaaggat
aaggaagatgaggaagcggcctttgacgggacaggccaggagatgctcagtgaacaggag
cacatgagcatctcaggcagcagtgctagacacatggtcatgcagaaactgctgaggaag
caagagtcaacagttatggtgctcaggaacatggtaggccccgaagacatagacgatgac
ctggaaggtgaggtaactgaagaatgtggaaagtttggcgctgtcaacagagtgattatt
taccaggagaagcagggagaggaggaggatgcagaggtcatcgttaagatatttgtggag
ttttcagcagcatctgagatgaacaaggccatacaggcgcttaacaaccgctggtttgga
ggtcggaaagtcgtcgctgaggtttacgaccaggagcggtttgacaacagtgatctctcg
gcatag
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