Tachysurus vachellii: 132848407
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Entry
132848407 CDS
T09596
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
tvc
Tachysurus vachellii
Pathway
tvc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132848407 (scrib)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_14
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_13
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
132848407
NCBI-ProteinID:
XP_060730055
LinkDB
All DBs
Position
7:9509744..9585656
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AA seq
1861 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLNAVPDEIYRYTRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQKLPPEVANFMQLVELDISRNDIPEIPETIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQSLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNHLEVLPDTLGALPNLRELWLDRNQLSSLPPELGSLRRLVCLDVSENQLTELPSEIS
GLIALTDLLLSQNHLENVPDSIGSLKQLSIFKVDQNRLVRLTDSIGECENLTEVMLTENL
LQTLPSSLGKLKKLTNLNVDRNRLSSVPGELGGCASLNVLSLRDNRVGKLPAELADATEL
HVLDVAGNRLQNLPFSLANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
TPSLENLLQSSVDESWPTDTNLNRVSVIQFQDQTKTDEEDDETAAERKQGLQRRATPHPS
ELKVMKNVIEARRNEAYTARPDDDLDSPDTEEKRMSGLSNQSHDSQVSNSTASANSQYET
HKVNGIEVELNERHEHEQEDDEDDTEYTEPTVHFAEEPIIRGGDEDDDDEDGEDGDRSDG
EAQPAPFPAERQRLIRKDTPHYKKHFKITKLPKPETVAALLENFSTEATTSAPRVNSEEQ
GGEDEEGESVNTPLLQRTQVADQVDSRLNQVNSSLQPVKGVSFDQVNNLLIEPARIEEEE
LVLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDKLLEVNSV
DLQGAEHHTAVEALRSSGTAVTMTVLRERMVEPENPITTTPLRPEDDYFPRERRSFGLPF
NLEPGSTALSTGPCQRLATCLVRNDKGLGFSIAGGKGSTPYRTGDMGIFISRIAEGGAAH
RDNILHVGDRVISINGVDMTEARHDQAVVLLTGTSPTISLLVEREQASGSPGRTRSHSPP
PPEPSDSPDQEEAGDDRLGNHLMEDEYPIEEVTLVKTGGPLGLSIVGGSDHASHPFGITE
PGVFISKVVPRGLACQSGLRVGDRILEVNSTDLRHATHQEAVKALLSNSKEIRMLVRRDP
SPPGMQDIVINKQPGEKLGISIRGGARGHAGNPFDPTDEGIFISKVSSSGAAARDARLRV
GMRILEVGNHSLLGMTHTEAVRVLRATGDTLVMLVCDGFDPRNVAGMEASPGVIANPFAA
GIVRKNSMESISSIDRDLSPEEMDIMQKEVEMVRETSQWEREEMEKVERMRLEREAATRL
LEEETESMSTGPLKLDYKTLAALPTTSLQRVNRVPSADPPRIDSPVREPLYSPGSQLPSL
RQSSCSAPATQGRETRYASIHVSSNVTTKDSSATKPGAIQPISRVRPPASPVSQDGHRSP
NPFQHGPSPVNSQTTPRAPSPDTFNEFPINVKQAYKAFAAVPHSMAVLEPPQDLYSQRNN
FHPKQTFPEPEECNEVFIGEGERGGLSPRPSLTSDRREYRNLAAVPRLSRPSLESKSKPH
TSCGRGSPEQRSFRDRQKYFEIDVKQQTPDSKPKPRVSLVGEDDLKKMKEEEAKRIESAR
EYIMDEDEDDEEEDLAKQVAQMKAHGKVILDGVEYKVESVSGHAPTPPRQCATPSNHSAT
PPSSGPSSVDGRADSQRNSMEDSFRLEPRPNSMTGLIPVYPGESAAPVRTAKAERRHQER
LRVQSPELSVVTDKDLSPAEKRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSKEGRKR
GTLDQLAESPSPAPTPSPTPMEDYSPRSVTSPGRLSLSEKKFDYRQFAAIPSAKPVYDIQ
SPDATDVQFNSDVSTSPVSCVEAEVPVAPVATTSALEEMALYSNKRKLRQGRHSLETAVP
T
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatccctctctggcggtgtaaccgccacgttgagtcggtggataaacgg
cactgctctctgaacgccgtccccgatgagatctaccgctacacacgcagtctggaggag
ctcctgctcgatgccaaccagctcagagaacttcccaagcccttctttcggctactgaac
ctgcgcaagctaggtttgagtgacaatgagatccagaaacttccccctgaggtggccaac
ttcatgcagctggttgagctggacatctctcgaaacgacattcctgaaatccctgagacc
attaagttctgtaaggcgctggagattgcggacttcagtggaaaccccctctccagatta
cccgatggctttacacagcttagagcactagcccaccttgcactcaatgatgtgtcacta
caatcactacctaatgacattggaaacttggctaatctggtaaccttggagctgagggag
aatctactgaagtctttgcccacctctctgtctttcctggttaaactggaacagctggat
ttgggcagcaatcacctggaagtattgccggacactctgggggcgctgcccaaccttcgg
gagctgtggctggataggaaccaactttcttcccttcccccagaattgggaagcttgcgg
cgattggtgtgcctggatgtgtccgagaaccagctcaccgagttgccctccgagatcagc
ggcctcatcgccctcactgacctgctgctctcacagaaccacctggagaatgtgcctgac
agcatcggctccttgaagcaactgtctatcttcaaagtggaccagaaccgccttgtgcgt
ctaacagattcaatcggtgaatgcgagaacctcacagaagtgatgctgacagagaatctt
ctacagactcttcccagttctctgggaaagttaaagaagctgaccaacttgaatgtggac
cgtaaccgcttgagcagcgtcccaggtgaactgggtggctgtgccagcctcaatgtgctc
tcgctccgagacaatcgtgtgggcaagctgcctgctgagcttgcagatgccacagagcta
catgtgctggacgtggcaggcaacaggctgcagaacctgccgttctcactagccaatctg
aacctcaaggccatgtggctggcagagaaccagtcacaacccatgctcaagtttcagacc
gaagatgatgagcggaccggggagaaggtgctcacctgctacctgttgccccaacagcct
acacccagcttagagaacctactgcagagcagtgtggacgaaagctggcccacagacacc
aatctgaacagagtgtccgtcatccagtttcaggaccaaaccaagactgatgaggaagat
gatgagaccgcggcagagaggaagcagggtctgcagaggcgagccacccctcacccgagt
gaactgaaagtgatgaagaatgtgatcgaggccagaagaaacgaagcttacacagctagg
ccagatgacgacctggactccccggacactgaggagaaacgtatgagtggattgtccaat
caaagccatgactcccaggtctctaacagcactgcttcagccaactctcagtatgagacg
cacaaagtaaacggcattgaggtggagcttaacgaaaggcacgagcacgaacaggaggac
gacgaggacgatacagaatacactgagcccaccgtgcactttgccgaggagcccattatc
cgcggcggcgacgaggacgacgatgacgaggacggcgaagacggcgatcgtagcgacggc
gaggctcagccagcacccttcccggctgagagacagcgcctcatccgcaaggacacacca
cactacaagaagcacttcaagatcaccaagctgcccaaacctgagactgtagctgcatta
ctggagaacttcagcaccgaagccaccacgtcagccccccgagtaaacagcgaagaacag
ggtggggaggatgaagagggagaatcagttaacactcctctgttgcagagaacacaggtg
gctgatcaagtggacagcaggctgaatcaggtgaacagctcgctgcagccggtgaagggg
gtgtcatttgatcaagtcaataatctgctgattgagcctgctcgaattgaggaggaagag
ctggtcctgagcatcctgagacaaactggtggattaggcatcagtatagctggggggaaa
ggatccactccttacaagggagatgatgagggtatatttatctctcgtgtgtcagaagac
ggtccagctgcacgagctggggtcaaagtgggagacaaattattggaggtaaacagtgta
gatttgcagggagcagagcaccacacggccgtagaggccttgcggagctcaggaacggca
gtgaccatgactgttctgcgtgagaggatggtagagcctgagaaccctatcaccactaca
cccctgagaccagaggatgattactttccccgggagaggaggtccttcggcctaccattc
aacctggaacctggatccactgcccttagcacaggcccctgccagcgcctggccacatgc
ttagtccgtaacgacaagggcttaggcttcagcattgctggtggaaaaggctccacccca
tatcgaacaggagacatgggaatcttcatctctcgcatcgccgaaggaggtgctgctcac
cgagacaacatccttcacgtaggagacagagtcatatctatcaatggtgtagacatgaca
gaagccaggcatgaccaagcagtagtgctgcttactggaacctcacccaccatctcgctg
ctagtggagcgggaacaagcgagcggctctccaggccgaacacgctcccactcacctcct
cctccggagccctcagattcaccagatcaagaagaggccggtgatgaccgcttggggaac
catctcatggaggatgagtaccctatagaggaagtgacactggtcaaaacgggtggtcct
ctgggtctgagcatcgtggggggcagtgaccatgccagccacccatttggcatcactgaa
ccaggagtgtttatatcaaaggtggtccctcgtggtttagcctgtcagagtgggttacga
gttggtgaccgcatcctagaggtaaactccactgacctgcgacacgccacccaccaggag
gctgtcaaagcccttctctcaaacagcaaggagatccgcatgctagttcgcagagacccc
tcacctcctggcatgcaggacattgtaattaacaagcagcctggggagaagcttggcatc
agtatccgaggaggggccagagggcatgcaggcaacccctttgatccaacagatgagggc
attttcatctcgaaggtgagctccagtggtgccgcagcacgagatgctcgcctgagggtg
ggtatgagaatcctagaggtgggcaatcacagtctccttggtatgactcatacggaggca
gtcagggtcttgcgtgccacgggagatactttggtcatgctggtgtgtgatggctttgac
cccagaaacgttgccggcatggaggcttcaccaggtgtcatcgcaaacccatttgctgct
ggaattgttcgaaagaacagcatggagagcatctcgtcgatagacagagatttgagccct
gaagagatggacatcatgcagaaggaggttgagatggtgagagagacgtctcagtgggag
cgggaggagatggagaaagtggagcgtatgcgcttggagcgtgaagcggctactcgtctg
ctggaggaggagactgagagcatgagcactggacctctgaaactggactacaagacactg
gcagctcttcccacgaccagcctgcagagggtcaatcgggttccatcagctgatccccca
agaattgatagccctgtccgggagccgctttattccccaggttctcaactgccatcatta
cgccagtcctcatgctcagcccctgccacacaaggcagggaaactcgatatgcaagcatt
catgtatcctccaatgtgactaccaaggacagttcagctaccaagcctggtgccatccag
cctatctcacgggtgcggccgcctgcctctccagtcagtcaggatggtcaccgtagtccc
aaccctttccagcatggcccttcccccgtcaactcccagaccactcctcgtgccccgtcc
cctgatactttcaacgaatttcccatcaatgtcaagcaggcatataaggcgtttgctgct
gtgccccactcaatggctgtgctggagcctccacaggatctctatagtcagaggaacaac
tttcacccaaagcagacctttccagagccagaggagtgtaatgaagtgtttataggtgag
ggtgaaagagggggcctcagccctcgtccctccctcacatctgaccgtcgtgagtacagg
aacctggcagctgtgccacgcctgtctcgcccctccctggagtctaagtctaagccccac
acatcctgtgggagagggagcccagagcaacggtctttcagagacagacagaagtacttt
gagattgatgtgaagcagcagacaccagacagcaaacccaaacctcgggtttcacttgta
ggagaggatgacctgaaaaaaatgaaagaggaggaagcaaagagaattgagagtgcacgg
gagtatattatggatgaggatgaggacgacgaagaggaagatctggcaaagcaggtggct
caaatgaaggcccacggcaaggttattctggatggggtcgagtacaaggttgagtctgtc
agcgggcacgctcctactcctcccaggcaatgtgccacaccctcaaaccacagtgccacg
cctcccagctcagggccttcctctgtagatggcagagctgattcccagcgcaactctatg
gaggatagctttagactggagcccagacccaactccatgactggtctgatccctgtgtat
cccggcgagtctgcagctcccgtccgcactgccaaggctgagcgcaggcaccaggagagg
ctgcgtgtgcagagcccagagctcagtgtggttacagacaaggacctttctcctgcagaa
aaacgggccctggaggcagaaaaaagagcaatgtggagggcagccaggatgaagtcttta
gagcaggatgctctcaaagctcagatggtcattgctaagtccaaggaagggagaaagcga
ggcactctggaccagctggctgaatcgccgtctcctgcgcccacaccttcacccactcct
atggaagattacagtcctcggtcggtgacatcaccgggtcgactgtccctgtcagaaaag
aagtttgactaccgacaattcgctgccattccttctgctaaacccgtatacgacattcag
tctccagatgctacagatgttcaattcaacagtgatgtctccactagcccagtttcctgt
gtagaagctgaggttcctgtagctcctgtggccaccacttctgctctggaggagatggct
ctgtacagcaacaaacgtaaactacgacaggggcggcacagtctagagactgccgttccc
acataa
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