Tachysurus vachellii: 132848430
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Entry
132848430 CDS
T09596
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132848430 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132848430 (smarcd3b)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132848430 (smarcd3b)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132848430 (smarcd3b)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132848430 (smarcd3b)
PBAF complex
132848430 (smarcd3b)
GBAF(ncBAF) complex
132848430 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
132848430
NCBI-ProteinID:
XP_060730113
LinkDB
All DBs
Position
7:complement(9703245..9749585)
Genome browser
AA seq
520 aa
AA seq
DB search
MSSEETAGGARKATKSKLFEFLVHGVRPGMPSGPRMPHQGAPMGPPGPPYGGNSAVRPGL
TNPAVESNRKRPAPSQQHIQQQQQQQQQQTGQNRNRKKPVGYPGASEMPGRQMDMREAQS
DPTLGSNTKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRP
MKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDPGKVKRKFSSFFKSLVI
ELDKDLYGPDNHLVELLSSGAQWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQF
KLDPRLARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFS
EIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKAQMSNFLLSTANQQ
EIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKIMTDVAGNPEE
ERRAEFYYQPWSQEAVSRYFYCKIQQRRQELEQALAMRNT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggaggagacggctggaggggcacgcaaagccaccaagagcaaactgttcgag
ttccttgtccatggagtgcgtcctggtatgccatcaggaccacggatgccccatcagggg
gcgccaatgggtcctccaggcccaccatatggaggaaactctgctgttcggcctgggctc
accaacccggcagtggagtccaaccgcaagcgtcccgcaccctcacaacaacacatccag
cagcagcagcagcaacaacagcagcaaacaggacagaacagaaacaggaagaagccggtg
ggatatcctggagccagtgagatgccagggagacagatggacatgagagaggcccaatca
gatcccacactcggatcaaacaccaagaggaggaaaatggctgataagattcttccacaa
aggattcgtgagttagtcccagagtcccaggcttatatggacctgctggcctttgagcgc
aaactggaccaaaccataatgcgcaagcgggtggacattcaagaagcactgaaaagaccc
atgaagcaaaagcgcaaactgcgactctacatctccaacaccttcaacccagccaagcct
gacgcagaggactccgacggcagcattgcatcctgggagctacgggtggagggaaagtta
cttgacgatccaggaaaagtgaaaaggaagttttcatccttctttaagagcctggtgatt
gagctggacaaagatctatatggaccagacaaccacctagtggagctgctgagcagcggg
gctcagtggcatcgcactcccaccactcaggagactgacggcttccaggtgaaaaggcca
ggcgatgtcaatgtacgctgtactctgctgttaatgctggattatcagcctcctcagttt
aagttggatccacggctcgctcggttgttgggtatccacactcagacccgctcgtgtatc
atccaggccctgtggcaatacatcaaaaccaacaagctgcaggactcccatgacaaagag
tatatcaactgtgataaatactttcagcagatttttgactgtcctcgactgaagttctcc
gagatccctcagcgtctgactaacctgctgcttccccctgatcccatcgtcataaaccat
gtcatcagtgtggacccaaacgatcagaaaaaaacagcctgctatgatatagatgtcgaa
gtggaggatccactcaaagcccagatgagcaacttcctgctctcaacagccaatcagcag
gagattgcctctcttgacaacaaaatccatgagactatcgagtccatcaaccagctgaag
attcaacgagacttcatgcttagtttctcccgagatcccaaaggttacatccaggactgg
ctgaaatcccagagcagagatcttaaaataatgacagacgtcgctgggaatccagaggaa
gagaggcgggcagagttttactaccagccctggtctcaggaggcagtcagtcgctacttc
tactgcaagattcaacagcgaaggcaagagctggaacaagccttggctatgaggaatacc
tag
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