Tachysurus vachellii: 132848495
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Entry
132848495 CDS
T09596
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tvc
Tachysurus vachellii
Pathway
tvc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132848495 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132848495 (taf6l)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132848495 (taf6l)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132848495 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
132848495 (taf6l)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132848495 (taf6l)
STAGA complex
132848495 (taf6l)
TFTC complex
132848495 (taf6l)
SAGA complex
132848495 (taf6l)
SLIK complex
132848495 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
132848495
NCBI-ProteinID:
XP_060730246
LinkDB
All DBs
Position
7:complement(11128828..11135846)
Genome browser
AA seq
640 aa
AA seq
DB search
MTETREERRFAEVSRDSIKLMAESAGVEIGDDLASMLSEDVCYRLREAAQNSSQFMRHAK
RRKLTVEDFNRGLRWSNTEVVCGYGAQDAVPFRPLKEGELFFVEDREVNLVELALATNIP
KGCAETTVRVHVSYLDGKGNLEPQGTVPSAVQSLSDDLLKYYQQITRAILGEDPHLMKVA
LMDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLV
SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYRQILLSLQKVLSD
PVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVY
GAILVAVERLLKMKAVSLTAEGSPAALQSSGGGGMCFRESSPGLSPPPEPLSEAPLGIAS
HLQAAGTGCQWEDWTPVSLPAMYCELYSFFGDSLAVRFSTGPALGSAPAAAPVQPTDARK
ESGSGTGSMESTRKMPQLTANMNLSPRPDGSPRTETVPPTLGATASGRSLARSSSSSSSA
APRSRSSSRPGRSASQSRDIFPKARFLPSQLGPPAFSFLIGGRQMGRRCQGRRFQTSFTP
TSSVSSLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLYLPL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgactgagacaagagaagagcgtcgcttcgcagaagtatctcgtgactccatcaagctg
atggctgagagcgctggtgttgagattggggatgatttagcctcgatgctctcagaagac
gtgtgttatcgcctcagagaggcagcacagaacagctcacagtttatgagacacgccaag
agacgaaaactgactgtagaggactttaacagaggactgcggtggagcaatacagaggtt
gtttgtggctacggtgcccaagatgctgtaccgttccggcctctaaaagagggcgagctt
ttctttgttgaagatcgggaggtgaatctggtagagttggctcttgccaccaacattccc
aaaggttgtgctgagacgacagtgcgagtgcacgtgtcttatctcgatggaaaaggaaat
ctggaacctcagggcacagtccctagtgctgtgcagtctctgtcagatgacctcctcaag
tattatcagcagatcactagagccattttaggagaagatccacatcttatgaaagttgct
ttaatggatcttcagtccaactctaagattgctgctcttctgccttattttgtttacgtc
atcagtggggtgaagtcggtaagtcatgatctggatcagctgaaccggctgttgcacatg
gtgaagagtctggttcagaacccatatctgtatcttggctcgtatgtgcgcagtctggtc
tccagcgtcatgtattgcatcctggagccacttgctgcctctattaatccactcaacgac
cactggaccctgcgggactacgctgctctgcttctcagtcacattttctggacccatggt
gatctggtgagtggactgtatcgtcagattctgttgtcactgcagaaggtcctgtcagac
ccagtgcgtcctctctgctcgcactatggagcggtggtcggtttacatgctctcggctgg
aaggctgtagagcgcgttttatatccccacctgcctgcatactgggcgaatctgcaggcc
gtgctggacgattactctgtctcgaatgcacaagtaaaagcagatgggcacaaagtctat
ggagcaattcttgtggcagtggagcgtttgctaaaaatgaaagctgtgagtttaactgca
gaagggagtcctgctgctcttcagagttctgggggtggagggatgtgctttagagaaagc
tcaccaggcctcagtccacctcctgaacccctctctgaagcccctctgggtattgcaagc
cacttgcaggcagcaggaacaggatgccagtgggaagactggacccctgtctcactacct
gctatgtactgcgaactctactccttctttggggatagtttggctgtgcgttttagcaca
ggtcctgcattaggcagtgcaccagctgcagctccagtgcaacctactgatgcacgaaaa
gagtcagggagtggcacaggcagcatggaaagcacacgcaagatgccacagctcactgcc
aacatgaacctcagtcccagaccagatggaagcccacgtactgagactgtaccacctact
ctaggtgctacagcatcagggaggtctctggctcgttcgtcttcctcttcctcatccgca
gcccctcgttcgaggtcctcctcccgtccagggcgttctgccagccaatctagagacatc
ttcccaaaagctcgcttcctgccttcccagttggggcctccagccttctcctttttgatt
ggtggccgtcagatgggccggcgatgccagggtcgacgtttccagacgagctttactcca
acttcatccgtcagctcccttcctcctcgggcctatgcccacaaactaccggttatcggg
agagtaagcaaaccagttagacgctggacctgctctcattattcactgtatctgcctctt
taa
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