Tachysurus vachellii: 132848559
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Entry
132848559 CDS
T09596
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132848559 (dennd4c)
Membrane trafficking [BR:
tvc04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
132848559 (dennd4c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR
Motif
Other DBs
NCBI-GeneID:
132848559
NCBI-ProteinID:
XP_060730363
LinkDB
All DBs
Position
7:12577059..12624159
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AA seq
1932 aa
AA seq
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MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSGQPANLNHGSLKSPELFLCYKRGHGKPPLSDIGVMYEGKDRLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQHRNSLAVTDICVIVTSKGETPPHTFLKLDKNL
NCGVWGSNVYLCYKKSVSSSNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGANIEC
WAPNTEYPLPVFSTFVLTNSSGEKVYGAAIQFYELYQADNLTEKQKIQLGLLTAVEKKPI
PNRTVNTNKCICLLSRWPFFQAFRDFLQFIYKLSVNTVNPLPIEKHISHFMHTVPFPSPQ
RPRILVQLSAQNSLMLSQPVCTPLPLSGADYSTLLANLGPENCVTLLHFILLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRNSSWKNLPKKPCKSLINSLNNLHHQISIVRRTSPACSAVEM
TPMEADFTWHKKKTALEMEIQEAFLRFMASILKGYRYYLKPITEAPSEKATAADSLYDLQ
GFLKSRDRANQKFYSQLTKTQLFIRFIEECTFVSDKDTGLAFFDYCIEKLFLSDKGTDKG
TKVEGELSEDTRLVELDESQKSEHTVFVLPPEPPADGSDPPPKYCYKSFPCLRLELFDRP
VQLKPALSTRAAGASVSSSPALLAKRTKQEVKLAYKMAKRFYKNPQLWAKCLLSHCYSLW
FICLPAGMRLAQSKPHAMQQALDVLLKMRSSEVEVQDEVCYRVVMQLCGQWEMPVMAVLV
LMEMKKAGVEANAITYGYYNKAVLESPWPSRNRSGRFMWTKLRNVVRGVAQFKQAVREEV
QSKTTPPITAVVSLDAIADGEGDRLSHCSADSSSEANGEEHTLFSRGLIVGDKNGSQCST
GGQSDQGYGSKDELHQDATDAFKTLAFPLSNDNLSSKSKTVKSQQNVEDIAGSVDSAVAV
SELPSPAEITPPPASIVKQSNSIDTSMCRKDSGGKLFTAHSKTEDITLPEDEGTKKPDSS
QSSQQQRVKSFAERSCSFSAESRAGMLRKKSSLELSVDNMGADAKILAAVFSGGKTPPPA
TASAPVFTDLGVAPIVSFGLEKEVVEDMELIHLGEKTGEGQGKKEQTAEDVVSKGSTDGL
GRSVSNSSSSSKAAEREDVEIGADPLSLLVSESEEAVSIQSQESARLVPPVVSRNLADEI
EMYMNLKSPLGAKASSMELNQEAQSNVDQADTPACKQSLGRRSSLPAGPVKGPDLLETPK
RSPAVTRSKTFAIKSQKTPSGDVQRSPSLTALVKSSQSGSLGSVINSISGIKMDALLSGP
KVDMLKSGMKQAANVASKVWGVVANAYSYSDDEEEQSQPGDSFPARLEEQLMSGDGTEST
VSRGLMPNLASNGLTHSNTSLGSSSGSSETGRPQHTVSMTPGRMARGADSERSEQSSSHH
ASTSSIYQNCALEVLMSSCSQCRSCEVLVYDEEIMAGWTADDSNLNTTCPFCNNSFLPLL
HVEFHDLRPQSGFYVTSTSGDSIHSGITQPTASSSQVKMGSPSDPADLINFSESPESKVD
SDVYQTGTQKLLVPAPVISDPLGLLERQAEKRGTSLTRSNSVGGPLQSLDSIQRPSHGVS
TTSLPNSLQEMVDTLGQKRPNPMPVSVPYLSPLVLRKELESLLENEGDQVIYTQKFLSQH
PILFWNLMWYFRRMNLPSILPGLILTSEHCNNGVQLPQTSLPQDSKQVYVQLLWDNVNLH
QEPTEPLYQLWRTFLRQKGSLAPTDHQEIRTLLNSIVRNIQTNDVYGPINLLLREIKRHP
EVKRQRSIYRQILFLSLVSLGRENIDVEAYDREYQLAFEKLSQEQLKVLSPIDRPPSNSV
QWCLKCFGAPFI
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaaaggtcatcgtgtgacggactattttgtggtggccggactgacggac
aagtccacacctctggagcaagatctgtctgagaccaaatcgagtggccctaaagctccc
atcactgacctagcagtgatcaataagtcagcaggtgaaacagtgcctgaggggtttaca
tgcatcgagagcacatacagtggccaaccagccaacctcaaccacggcagcctgaagagc
cccgaactcttcctgtgttacaagagaggccatggaaaacctcccttaagcgacattggg
gtgatgtatgaagggaaggacaggctgatccagggctgtgaagtgatccaggccacgccg
tatggccgttgcgccaacgtcaacaatagctcagctacatcgcaacgcatcttcatcacg
ttccgacgtgcacctcccgtccagcatcgcaactctctggccgttaccgacatttgtgtg
atagtcacaagcaaaggcgagactcctccacacaccttcctcaagttggacaagaacctt
aattgtggcgtgtggggctccaatgtgtacctgtgctacaaaaagtcagtctcttcttcc
aactctattgcctataaagcaggtctgatctttcgctacccggaggaagattatgaatcc
tttcccctttctgagtcagtgcctctgttctgtcttcctatgggggcgaatattgagtgc
tgggctcccaacaccgagtaccctttacccgtcttctctacattcgtcctaaccaattca
tctggggaaaaggtctatggcgcagccatccagttctacgagctctaccaagcagataac
ctgactgagaagcagaagatccaacttggactccttacagctgtggaaaagaagcccatt
ccaaatcgcacagtcaacaccaacaagtgcatctgtcttctgtctcgctggcccttcttc
caagctttcagagacttcctccagttcatttacaagctctcggtcaataccgtcaaccct
ctgcctattgaaaagcacatctcccatttcatgcacactgtgccctttccctctccgcag
agacccagaatactggtccagctctcagcacaaaacagcttaatgctgtcccagcctgta
tgtacaccgttaccgcttagtggtgcagactatagcactctgctagctaacctgggcccg
gaaaactgtgtcacacttctgcatttcatcctgctagagagcaagatactactgcactcc
cttagaccggctgtactgaccggtgtagctgaggctgtggtggcgatgatctttcctttt
cagtggcagtgtccctacatccctctgtgtcctctctctctggctggggttctgaatgcg
ccctgtccttttattgtcggagtggactccagatactttgacctctatgatcccccacca
gatgtggtttgcgtggacctggacaccaacactatctacctgtctgacgagaagagaaac
tctagctggaagaatctcccaaagaagccatgcaagagtctgattaactcactgaacaat
ctgcaccaccagattagtattgtgagacggacaagcccagcatgctcggctgtagagatg
accccgatggaggctgattttacatggcataaaaagaagaccgccctcgagatggagatt
caagaggcatttctgcgcttcatggcctcaatattaaagggctatcgatactacctcaaa
cccatcaccgaggcgccctctgagaaggcgactgctgctgactccctctacgatctgcag
gggtttttaaaaagtcgggatcgtgctaaccagaagttctactcccagctcaccaagact
cagttatttattcgtttcatagaggaatgcacctttgtcagcgacaaagatactggcttg
gctttttttgactactgcattgaaaagcttttcctgtctgataaaggaacagacaagggc
acaaaggttgaaggagagctgtcagaagacaccaggctggtagagctggatgagtctcag
aagagcgagcacactgtctttgtcttgcccccagagcccccagccgacggctcagatccg
cctccaaaatattgctacaagagctttccttgtttgcggctggagttattcgatcgcccg
gtacagttgaagccagcactcagcactagggctgcaggagccagtgtgtccagcagccct
gctctcctggctaaaagaaccaagcaggaagtcaaactggcctacaagatggcaaaacgc
ttctataagaaccctcagctgtgggcgaagtgtctgttaagccactgctatagcctgtgg
tttatctgcctgcctgcaggcatgcgtttggctcaatccaagccccatgccatgcagcaa
gcacttgatgtcctgctcaagatgaggagctctgaggtggaggtgcaggatgaggtgtgt
taccgtgtagtaatgcagctgtgcggtcagtgggaaatgcccgtcatggccgtgctcgtc
ctaatggagatgaagaaggccggtgttgaggccaatgccatcacttatggatactacaac
aaggctgtcttggagagcccttggcctagtcgaaatcgcagcggccgattcatgtggacc
aaactgcggaacgtggtgcgaggggtggctcaattcaaacaggctgtgcgggaagaagta
cagtcaaaaactactcctcctattacagcagtagtgtctctggatgcaatagctgatggc
gagggagacagacttagccactgcagtgctgacagctccagtgaagctaatggagaagag
cacacgctgttctcacgtggtctgattgtgggagacaaaaacgggagtcagtgtagcaca
ggaggacagtctgaccaaggttatggttctaaggatgagctacatcaggacgctacagat
gcttttaaaactctagcatttcctctctctaatgacaacttatccagcaagagcaaaaca
gtaaagagtcaacagaatgttgaggacattgctggctctgtggatagtgcagtggctgtg
tcagagcttcccagtcctgctgaaattacaccccctccagccagcatcgtcaaacagtcc
aacagcattgacacgtccatgtgtagaaaggactctggtgggaaactgttcactgctcac
agtaagactgaggatattaccctgccagaggatgaaggcactaaaaaaccagactcgtcc
caaagcagccagcagcagagggtcaaatcttttgcagagcgcagctgcagtttcagtgca
gagagtagagctggcatgttgcgaaagaagagcagtctggagttgagtgtggacaacatg
ggcgcagacgccaaaatccttgctgctgttttttccggtggcaagactcctcctcctgct
acagcctcagctccagtctttactgacctaggggtcgcacctattgtaagctttggcctt
gagaaagaggtcgttgaggatatggagttaattcatttgggtgagaaaaccggcgaaggg
cagggcaaaaaggaacagacggctgaggatgtcgtgtctaagggcagcaccgacggattg
gggagaagcgtgagcaactcttcctcatcctctaaggcagcagagagagaggatgtagaa
atcggagcagatcctctttccttgctggtctcagaaagcgaagaagcagtgtccattcag
agccaagaatctgcacgccttgtccctccagtggtctcacgaaacctggccgacgagatt
gagatgtacatgaacctgaagagcccattaggagctaaggcctctagcatggaactgaac
caggaggcccagagtaatgttgatcaggcagacactcctgcctgtaagcagtctttggga
agaaggtctagcctccctgcaggcccagtaaagggcccagatttactagaaacccctaaa
cgcagccctgctgtcacacgctctaagacttttgcaatcaagtcccagaagacccctagc
ggtgatgttcaaaggtcaccgtctctgactgcactagtgaagtcatcacagagcggatct
ttaggctctgtcatcaactccatatcgggcatcaagatggacgccttgctttcaggacct
aaagtggatatgctgaagtctggcatgaagcaagcagctaacgtagccagtaaagtgtgg
ggggtcgtggccaatgcctactcctattcagatgatgaggaggagcagagccagcctgga
gacagcttccctgctcgactggaagagcagctaatgtctggagatggaacagagagcacc
gtgtccagaggactcatgcccaacctggcctccaatggcctcactcacagcaacaccagt
ctgggcagcagcagcgggagcagtgaaactggccggccgcaacacaccgtgtccatgact
cctggccggatggcaaggggagcggactcagagagatctgagcagagctcctctcatcat
gccagcacttcaagcatctatcagaactgtgctttagaggtgctaatgtcgagctgttct
cagtgtcggtcctgtgaggttctggtgtacgatgaagagatcatggcaggttggacagcg
gacgactccaacttgaacacaacttgtcctttctgcaacaattccttcctgcctttgctg
catgtggagttccatgacctgcgccctcagtctgggttctatgtgaccagcacctcagga
gacagtatccacagtggcatcacgcagcctacagcctccagctctcaggtaaagatgggc
agccccagtgaccctgctgacctcatcaacttctctgaatcccctgagagcaaggtggat
agtgacgtctaccagaccggcacacagaaactactcgtgccagcacctgtgatttcggac
ccgctgggcctgctggagaggcaggcagagaaacgtggcacgtctctgactcgcagtaac
agcgtgggcgggcctctacagagtctggactctatccagcggcccagtcatggagtgtcc
accactagcctgcccaatagcctgcaggaaatggtggacacgttgggtcagaagcgtccc
aacccaatgccagtctcagtgccttacctgagcccgctggtgttaaggaaagagctggag
tccttactagaaaatgagggagatcaggttatctacactcaaaagtttctcagccagcac
cctatcctcttctggaacctgatgtggtatttccgccggatgaacctgcccagcattcta
cctggactaatattgacctctgaacactgcaacaatggagtacagctgcctcagacatcc
ctgcctcaagacagtaagcaagtatatgtgcagttactgtgggacaacgttaacctccac
caggagcccactgaacctctgtaccagctctggaggactttcttgagacagaagggttct
ttggctcccacggaccaccaggagatacggaccctcctcaacagcattgtcagaaacatc
cagaccaatgacgtctacggccccataaacctgctccttcgtgagataaagcgacacccg
gaggtcaaacggcagaggagtatatacagacaaattttgttcctttcccttgtttctttg
ggaagggagaacattgatgttgaggcctatgaccgggaatatcaactagcctttgaaaag
ctgagtcaagagcagctgaaagtgctctctcctattgaccgtcctccctccaacagtgtg
cagtggtgcctcaagtgctttggagctccattcatatga
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integrated database retrieval system
