Tachysurus vachellii: 132848568
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Entry
132848568 CDS
T09596
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132848568 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132848568 (dhx15)
03009 Ribosome biogenesis [BR:
tvc03009
]
132848568 (dhx15)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132848568 (dhx15)
Spliceosome [BR:
tvc03041
]
Complex A
U2 snRNP components
U2 related factors
132848568 (dhx15)
Complex B
132848568 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
132848568 (dhx15)
Ribosome biogenesis [BR:
tvc03009
]
Eukaryotic type
90S particles
Helicases
132848568 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Atrophin-1
nSTAND3
SRP54
AAA_25
Flavi_DEAD
AAA_29
AAA_30
Motif
Other DBs
NCBI-GeneID:
132848568
NCBI-ProteinID:
XP_060730384
LinkDB
All DBs
Position
7:12810875..12836574
Genome browser
AA seq
770 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDERPKDRDRDRDRDRDRDRERDRDRERDRE
SKAPNSALNASVVSGGGMLPLKQAAIHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKER
FHEILTRHQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRV
ADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER
TLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTP
EPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKI
IPLYSTLPPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQK
VYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRS
NLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEF
PLDPQLAKMVIASCEYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHL
TLLNVYHAFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDY
YINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKN
YIRTCTDIKPEWLIKFAPQYYEMSNFPQCEAKRQLERIIAKLQTKEYTQY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgacatcgtttggatttaggtgatgattattcgtcgagtaaaaagaggtca
tcagacggaaaagaccgtgacagagatcgagatgaaaggccaaaggaccgggaccgggat
cgtgatagagatcgggacagagatagggagcgtgacagagaccgggaacgagacagggaa
agcaaagctcccaactctgccctgaatgcgagcgtagtgtctggaggagggatgcttcct
ctgaaacaggccgccatccatcagcagatcaaccctttcaccaacctaccccacacacca
cgctattacgagatcctcaagaagcgtctgcagcttcctgtctgggagtacaaagagcgc
ttccatgagattcttacacgccatcaaagcttcgtgctggtgggagagactggctccgga
aagaccacacagatccctcagtggtgtgtagatatggtgcgtgctctgccggggcccaaa
cgtggtgtagcctgtacacagccccgcagagtggcagccatgagtgtggctcaacgagtg
gcagatgagatggatgtcatgctgggacaggaagttggctactctatcagatttgaggac
tgcagctcggcgaaaaccatcctcaagtatatgactgacggtatgttactccgagaagcc
atgaatgacccactgctcgagcgatatggcgtaatcatactggacgaggctcatgagcgc
acactggccacagatattctgatgggtgttcttaaagaagttgttcgccagagagcagat
ctaaaggttattgtcatgagtgccaccttggatgcaggaaagttccaggtgtactttgac
agctgccccttgctcaccatccctggcagaacacatcccgtagagatcttctacacacca
gagcccgaacgcgactacctggaggcggccatcagaacagtcattcagatccatatgtgt
gaggaagacgagggagatgtcctacttttcctcacaggacaggaggaaatcgacgaagcc
tgcaagcggatcaaacgggaaattgacgacctgggccctgaagtgggtgacatcaaaatc
atccccctttactccaccctaccaccacagcagcagcagaggatcttcgagcctccacca
cctcgcaagcctagcggagctattggaagaaaggtcgtagtgtcgacaaacattgctgag
acgtcgctgaccattgacggtgtggtgtttgtaatcgatcctggctttgccaagcaaaag
gtgtataacccacgcattagggtagagtcactgctagtgacggcgatcagtaaagcatca
gctcagcagagggcaggaagagccgggcgtacgcgaccgggtaaatgcttccgcctttac
acggagaaggcgtacaaaactgaaatgcaggataacacatacccagagattctccgatcc
aacctgggctctgtagtgttacagctgaagaagcttggtattgatgacctggtgcatttt
gacttcatggatccaccagcacctgagactctgatgcgtgctctggagctgttaaactat
ctggcagcactgaatgacgatggagacctgaccgagctaggctctatgatggcagagttc
cctctggaccctcagttggctaagatggtcattgccagctgcgaatacaattgctccaat
gaaatcctctctatcaccgccatgctatcagtcccacagtgctttgtgcgccccaccgag
gccaagaaggcggctgacgaggccaagatgaggtttgcccacatcgacggagaccacctc
acactgctcaatgtgtaccacgctttcaaacagaaccacgagtcagtgcagtggtgctat
gataactttgtgaactaccgttcgctgatgtcagcagataatgtgcggcagcagctctcg
cgcatcatggaccgtttcaacctgccacggcgtagcactgagttcaccagtcgtgattac
tacatcaatatccgccgtgcgctggtcaccggcttcttcatgcaggttgcccacctggag
cgtacagggcactatttgacagtgaaggacaaccaggtggtccagctgcatccgtccacc
gtgctggaccataagcctgagtgggtgctgtacaacgagtttgtgctgaccaccaagaac
tacatccgcacctgtacagacatcaagcctgagtggctgatcaaatttgctccacagtac
tacgagatgagcaacttccctcagtgtgaagccaagcggcagttggagcgcatcatcgct
aaactccaaactaaggaatacacacaatactaa
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